GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005442-TA|BGIBMGA005442-PA|IPR002213|UDP-
glucuronosyl/UDP-glucosyltransferase
         (420 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    26   0.69 
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   3.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   4.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   4.9  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    23   6.4  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   8.5  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   8.5  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   8.5  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 25.8 bits (54), Expect = 0.69
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 203 IEKKNALINVFKSLNQTVLWKWEDDNFGNQ 232
           I ++N+  N+ KSLN    WK+ D +FG++
Sbjct: 19  IVRENSPRNLEKSLNVIHEWKYFDYDFGSE 48


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 298 IILEYHNLNENNMRSLINHVLSDEK 322
           ++ E  N NE N R ++  VL D +
Sbjct: 72  VVDENGNFNEKNTRDIVQAVLDDNE 96


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 34  QEATYIFAHKYKAPLILITT 53
           Q+ +++F+  Y A LILI+T
Sbjct: 670 QDMSFLFSQLYNALLILIST 689


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 34  QEATYIFAHKYKAPLILITT 53
           Q+ +++F+  Y A LILI+T
Sbjct: 760 QDMSFLFSQLYNALLILIST 779


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)

Query: 210 INVFKSLNQTVLWKWEDDNFGNQTANIKTRKWLPQNEILAHQ 251
           I  F    + + +KW   N G Q+  I     LPQ  +L H+
Sbjct: 156 IESFGYTMRDIRYKW---NAGLQSVGISNEVELPQFRVLGHR 194


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 348 WIEYVIRHKGAHFMKNPALKLNW 370
           WI ++ RH  A F+    L ++W
Sbjct: 369 WIHHLARHAVACFLTRGDLWISW 391


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 310 MRSLINHVLSDEKYKNNARELSIRFRDRPIKALDAAMYW 348
           +++ +N  L  EK+  + +E  + F       LD  +YW
Sbjct: 136 LQATLNCGLRLEKFPFDVQECPLIFESWTHNVLDMVLYW 174


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 256 FISHGGLMGTIEAIFHGVPIIGIPLFGDQYNNLLQVENAGSGIILEYHNL 305
           F+  GG     +A++ G  +    +  ++Y+N+L  E   S   L++ N+
Sbjct: 72  FLGSGGFGIVYKALYKGEQVAAKIIQTEKYSNMLNSEKHAS--FLKHSNI 119


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.139    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,982
Number of Sequences: 429
Number of extensions: 6570
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 8
length of query: 420
length of database: 140,377
effective HSP length: 59
effective length of query: 361
effective length of database: 115,066
effective search space: 41538826
effective search space used: 41538826
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)