Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005441-TA|BGIBMGA005441-PA|undefined
(818 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY998489-1|AAX93512.1| 198|Homo sapiens SRY protein protein. 33 3.1
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 33 4.1
AL357374-11|CAI13608.1| 202|Homo sapiens RNA binding motif prot... 33 4.1
BC039814-1|AAH39814.1| 320|Homo sapiens zinc finger, RAN-bindin... 33 5.4
AY190519-1|AAO38848.1| 1692|Homo sapiens Rab3A-interacting molec... 33 5.4
AL590011-1|CAI16961.1| 1039|Homo sapiens regulating synaptic mem... 33 5.4
AL445256-1|CAI39598.1| 1039|Homo sapiens regulating synaptic mem... 33 5.4
AL390056-1|CAI21554.1| 1039|Homo sapiens regulating synaptic mem... 33 5.4
AL353708-1|CAI41049.1| 671|Homo sapiens torsin A interacting pr... 33 5.4
AL034373-1|CAI20558.1| 1039|Homo sapiens regulating synaptic mem... 33 5.4
AK001780-1|BAA91906.1| 379|Homo sapiens protein ( Homo sapiens ... 33 5.4
AB051866-1|BAB87242.1| 1470|Homo sapiens RIM long form protein. 33 5.4
AB045726-1|BAB87121.1| 1028|Homo sapiens RIM short form protein. 33 5.4
AB002338-1|BAA20798.1| 1053|Homo sapiens KIAA0340 protein. 33 5.4
AF314184-1|AAL76163.1| 805|Homo sapiens SR rich protein protein. 32 7.1
Y19188-1|CAB60727.1| 759|Homo sapiens aczonin protein. 32 9.4
BC111692-1|AAI11693.1| 620|Homo sapiens SR140 protein protein. 32 9.4
BC039871-1|AAH39871.1| 757|Homo sapiens cell cycle progression ... 32 9.4
BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif prote... 32 9.4
BC015203-1|AAH15203.1| 470|Homo sapiens Unknown (protein for IM... 32 9.4
BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for IM... 32 9.4
AL512443-2|CAH70059.1| 320|Homo sapiens zinc finger, RAN-bindin... 32 9.4
AL512443-1|CAH70058.1| 330|Homo sapiens zinc finger, RAN-bindin... 32 9.4
AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein pr... 32 9.4
AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif prote... 32 9.4
AK222858-1|BAD96578.1| 330|Homo sapiens zinc finger protein 265... 32 9.4
AK022459-1|BAB14042.1| 424|Homo sapiens protein ( Homo sapiens ... 32 9.4
AF212228-1|AAK14914.1| 755|Homo sapiens CCP8 protein. 32 9.4
AB209568-1|BAD92805.1| 316|Homo sapiens zinc finger protein 265... 32 9.4
AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein. 32 9.4
>AY998489-1|AAX93512.1| 198|Homo sapiens SRY protein protein.
Length = 198
Score = 33.5 bits (73), Expect = 3.1
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 707 PAIRRGSNSSDNYSETYRYTTRSGDPERPSVTDTVE-IVSKKVVPSRDGRSKEIIES-RE 764
PA+RRGS+S S +Y +G+ + +V + V+ ++ +V SRD R K +E+ R
Sbjct: 26 PALRRGSSSLCTESCNSKYQCETGENSKGNVQERVKRPMNAFIVWSRDQRRKMALENPRM 85
Query: 765 INS-VTKSRGFKQEPL 779
NS ++K G++ + L
Sbjct: 86 RNSEISKQLGYQWKML 101
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 33.1 bits (72), Expect = 4.1
Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 3/133 (2%)
Query: 624 DDTDKKKIFLKGLKERAPELYQTLHADEESDGSRLSSRYGTPSPHYKERLSEERITKTPL 683
DD D + + K+ +L + + EE R S+ + S K S+ER
Sbjct: 3 DDIDIEAMLEAPYKKDENKL-SSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDR 61
Query: 684 YKTESLNRETSPFVSRLDSRMKSPAIRRGSNSSDNYSETYRYTTRSGDPERPSVTDTVEI 743
+ +S +RE SR R +S + R Y YR +RS P R + E
Sbjct: 62 ERKKSKSRERKR--SRSKERRRSRSRSRDRRFRGRYRSPYRRRSRSKSPFRKDKSPVREP 119
Query: 744 VSKKVVPSRDGRS 756
+ RD R+
Sbjct: 120 IDNLTPEERDART 132
>AL357374-11|CAI13608.1| 202|Homo sapiens RNA binding motif protein
39 protein.
Length = 202
Score = 33.1 bits (72), Expect = 4.1
Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 3/133 (2%)
Query: 624 DDTDKKKIFLKGLKERAPELYQTLHADEESDGSRLSSRYGTPSPHYKERLSEERITKTPL 683
DD D + + K+ +L + + EE R S+ + S K S+ER
Sbjct: 3 DDIDIEAMLEAPYKKDENKL-SSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDR 61
Query: 684 YKTESLNRETSPFVSRLDSRMKSPAIRRGSNSSDNYSETYRYTTRSGDPERPSVTDTVEI 743
+ +S +RE SR R +S + R Y YR +RS P R + E
Sbjct: 62 ERKKSKSRERKR--SRSKERRRSRSRSRDRRFRGRYRSPYRRRSRSKSPFRKDKSPVREP 119
Query: 744 VSKKVVPSRDGRS 756
+ RD R+
Sbjct: 120 IDNLTPEERDART 132
>BC039814-1|AAH39814.1| 320|Homo sapiens zinc finger, RAN-binding
domain containing 2 protein.
Length = 320
Score = 32.7 bits (71), Expect = 5.4
Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 9/114 (7%)
Query: 624 DDTDKKKIFLKGLKERAPELYQTLHADEESDGS---RLSSRYGTPSPHYKERLSEERITK 680
DD D K L +E ++ GS R SSR +PS S R +
Sbjct: 176 DDADLSKYNLDASEEEDSNKKKSNRRSRSKSGSSHSRSSSRSSSPSSSRSRSRSRSRSSS 235
Query: 681 TPLYKTESLNRETSPFVSRLDSRMKSPAIRRGSNSSDNYSETYRYTTRSGDPER 734
+ ++ S +RE S SR S RGS+S S Y++ S PER
Sbjct: 236 SSQSRSRSSSRERSR--SRGSKSRSSSRSHRGSSSPRKRS----YSSSSSSPER 283
>AY190519-1|AAO38848.1| 1692|Homo sapiens Rab3A-interacting molecule
protein.
Length = 1692
Score = 32.7 bits (71), Expect = 5.4
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 376 ELAPPTAPPHRYYLGEDPFAPSIYGREHKYEGSSKRTAGHDAREHRDRGQFSSTLGRFSH 435
+ APP+APP R G +P ++ G E K +S R+ RE + S G+ +
Sbjct: 231 DAAPPSAPPDR-SKGAEPSQQAL-GPEQKQ--ASSRSRSEPPRERKKTPGLSEQNGKGAL 286
Query: 436 STSRLNPNSETEEDYKRSVQTLPRKLHDRKEKATEKPSSNKYWHRLTPNKR 486
+ R + + + +V+ RK R+ + EK S Y TP KR
Sbjct: 287 KSERKRVPKTSAQPVEGAVEERERK-ERRESRRLEKGRSQDYPD--TPEKR 334
>AL590011-1|CAI16961.1| 1039|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 1039
Score = 32.7 bits (71), Expect = 5.4
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 376 ELAPPTAPPHRYYLGEDPFAPSIYGREHKYEGSSKRTAGHDAREHRDRGQFSSTLGRFSH 435
+ APP+APP R G +P ++ G E K +S R+ RE + S G+ +
Sbjct: 231 DAAPPSAPPDR-SKGAEPSQQAL-GPEQKQ--ASSRSRSEPPRERKKTPGLSEQNGKGAL 286
Query: 436 STSRLNPNSETEEDYKRSVQTLPRKLHDRKEKATEKPSSNKYWHRLTPNKR 486
+ R + + + +V+ RK R+ + EK S Y TP KR
Sbjct: 287 KSERKRVPKTSAQPVEGAVEERERK-ERRESRRLEKGRSQDYPD--TPEKR 334
>AL445256-1|CAI39598.1| 1039|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 1039
Score = 32.7 bits (71), Expect = 5.4
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 376 ELAPPTAPPHRYYLGEDPFAPSIYGREHKYEGSSKRTAGHDAREHRDRGQFSSTLGRFSH 435
+ APP+APP R G +P ++ G E K +S R+ RE + S G+ +
Sbjct: 231 DAAPPSAPPDR-SKGAEPSQQAL-GPEQKQ--ASSRSRSEPPRERKKTPGLSEQNGKGAL 286
Query: 436 STSRLNPNSETEEDYKRSVQTLPRKLHDRKEKATEKPSSNKYWHRLTPNKR 486
+ R + + + +V+ RK R+ + EK S Y TP KR
Sbjct: 287 KSERKRVPKTSAQPVEGAVEERERK-ERRESRRLEKGRSQDYPD--TPEKR 334
>AL390056-1|CAI21554.1| 1039|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 1039
Score = 32.7 bits (71), Expect = 5.4
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 376 ELAPPTAPPHRYYLGEDPFAPSIYGREHKYEGSSKRTAGHDAREHRDRGQFSSTLGRFSH 435
+ APP+APP R G +P ++ G E K +S R+ RE + S G+ +
Sbjct: 231 DAAPPSAPPDR-SKGAEPSQQAL-GPEQKQ--ASSRSRSEPPRERKKTPGLSEQNGKGAL 286
Query: 436 STSRLNPNSETEEDYKRSVQTLPRKLHDRKEKATEKPSSNKYWHRLTPNKR 486
+ R + + + +V+ RK R+ + EK S Y TP KR
Sbjct: 287 KSERKRVPKTSAQPVEGAVEERERK-ERRESRRLEKGRSQDYPD--TPEKR 334
>AL353708-1|CAI41049.1| 671|Homo sapiens torsin A interacting
protein 1 protein.
Length = 671
Score = 32.7 bits (71), Expect = 5.4
Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 1/145 (0%)
Query: 665 PSPHYKERLSEERITKTPLYKTESLNRETSPFVSRLDSRMKSPAIRRGSNSSDNYSETYR 724
P P E + R T+ +E + SP ++R R + ++S + S+T
Sbjct: 201 PRPQETEEMKTRRTTRLQQQHSEQPPLQPSPVMTRRGLRDSHSSEEDEASSQTDLSQTIS 260
Query: 725 YTTRSGDPERPSVTDTVEIVSKKVVPSRDGRSKEIIESREINSVTKSRGFKQEPLPSVKH 784
T E P+V++ + ++ + P R R + +++N + + + S
Sbjct: 261 KKTVRSIQEAPAVSEDL-VIRLRRPPLRYPRYEATSVQQKVNFSEEGETEEDDQDSSHSS 319
Query: 785 VENGKRSNFGFEKHGPYTERKSSTY 809
V K + ++ G T R SS Y
Sbjct: 320 VTTVKARSRDSDESGDKTTRSSSQY 344
>AL034373-1|CAI20558.1| 1039|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 1039
Score = 32.7 bits (71), Expect = 5.4
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 376 ELAPPTAPPHRYYLGEDPFAPSIYGREHKYEGSSKRTAGHDAREHRDRGQFSSTLGRFSH 435
+ APP+APP R G +P ++ G E K +S R+ RE + S G+ +
Sbjct: 231 DAAPPSAPPDR-SKGAEPSQQAL-GPEQKQ--ASSRSRSEPPRERKKTPGLSEQNGKGAL 286
Query: 436 STSRLNPNSETEEDYKRSVQTLPRKLHDRKEKATEKPSSNKYWHRLTPNKR 486
+ R + + + +V+ RK R+ + EK S Y TP KR
Sbjct: 287 KSERKRVPKTSAQPVEGAVEERERK-ERRESRRLEKGRSQDYPD--TPEKR 334
>AK001780-1|BAA91906.1| 379|Homo sapiens protein ( Homo sapiens
cDNA FLJ10918 fis, clone OVARC1000326. ).
Length = 379
Score = 32.7 bits (71), Expect = 5.4
Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 1/145 (0%)
Query: 665 PSPHYKERLSEERITKTPLYKTESLNRETSPFVSRLDSRMKSPAIRRGSNSSDNYSETYR 724
P P E + R T+ +E + SP ++R R + ++S + S+T
Sbjct: 114 PRPQETEEMKTRRTTRLQQQHSEQPPLQPSPVMTRRGLRDSHSSEEDEASSQTDLSQTIS 173
Query: 725 YTTRSGDPERPSVTDTVEIVSKKVVPSRDGRSKEIIESREINSVTKSRGFKQEPLPSVKH 784
T E P+V++ + ++ + P R R + +++N + + + S
Sbjct: 174 KKTVRSIQEAPAVSEDL-VIRLRRPPLRYPRYEATSVQQKVNFSEEGETEEDDQDSSHSS 232
Query: 785 VENGKRSNFGFEKHGPYTERKSSTY 809
V K + ++ G T R SS Y
Sbjct: 233 VTTVKARSRDSDESGDKTTRSSSQY 257
>AB051866-1|BAB87242.1| 1470|Homo sapiens RIM long form protein.
Length = 1470
Score = 32.7 bits (71), Expect = 5.4
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 376 ELAPPTAPPHRYYLGEDPFAPSIYGREHKYEGSSKRTAGHDAREHRDRGQFSSTLGRFSH 435
+ APP+APP R G +P ++ G E K +S R+ RE + S G+ +
Sbjct: 231 DAAPPSAPPDR-SKGAEPSQQAL-GPEQKQ--ASSRSRSEPPRERKKTPGLSEQNGKGAL 286
Query: 436 STSRLNPNSETEEDYKRSVQTLPRKLHDRKEKATEKPSSNKYWHRLTPNKR 486
+ R + + + +V+ RK R+ + EK S Y TP KR
Sbjct: 287 KSERKRVPKTSAQPVEGAVEERERK-ERRESRRLEKGRSQDYPD--TPEKR 334
>AB045726-1|BAB87121.1| 1028|Homo sapiens RIM short form protein.
Length = 1028
Score = 32.7 bits (71), Expect = 5.4
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 376 ELAPPTAPPHRYYLGEDPFAPSIYGREHKYEGSSKRTAGHDAREHRDRGQFSSTLGRFSH 435
+ APP+APP R G +P ++ G E K +S R+ RE + S G+ +
Sbjct: 231 DAAPPSAPPDR-SKGAEPSQQAL-GPEQKQ--ASSRSRSEPPRERKKTPGLSEQNGKGAL 286
Query: 436 STSRLNPNSETEEDYKRSVQTLPRKLHDRKEKATEKPSSNKYWHRLTPNKR 486
+ R + + + +V+ RK R+ + EK S Y TP KR
Sbjct: 287 KSERKRVPKTSAQPVEGAVEERERK-ERRESRRLEKGRSQDYPD--TPEKR 334
>AB002338-1|BAA20798.1| 1053|Homo sapiens KIAA0340 protein.
Length = 1053
Score = 32.7 bits (71), Expect = 5.4
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 376 ELAPPTAPPHRYYLGEDPFAPSIYGREHKYEGSSKRTAGHDAREHRDRGQFSSTLGRFSH 435
+ APP+APP R G +P ++ G E K +S R+ RE + S G+ +
Sbjct: 256 DAAPPSAPPDR-SKGAEPSQQAL-GPEQKQ--ASSRSRSEPPRERKKTPGLSEQNGKGAL 311
Query: 436 STSRLNPNSETEEDYKRSVQTLPRKLHDRKEKATEKPSSNKYWHRLTPNKR 486
+ R + + + +V+ RK R+ + EK S Y TP KR
Sbjct: 312 KSERKRVPKTSAQPVEGAVEERERK-ERRESRRLEKGRSQDYPD--TPEKR 359
>AF314184-1|AAL76163.1| 805|Homo sapiens SR rich protein protein.
Length = 805
Score = 32.3 bits (70), Expect = 7.1
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 12/137 (8%)
Query: 648 HADEESDGSRLSSRYGTPSPHYKERLSEERIT-KTPLYKTES-----LNRETSPFVSRLD 701
H ++E G S + SP R S T + Y + S +R +SP +
Sbjct: 499 HKEKEKQGRSRSGSSSSGSPSSNSRTSSTSSTVSSSSYSSSSGSSRTSSRSSSPKRKKRH 558
Query: 702 SRMKSPAIRRGSNSSDNYS-----ETYRYTTRSGDPERPSVTDTVEIVSKKVVPSRD-GR 755
SR +SP I+ + S +YS E+ R + D R + + PSR+ R
Sbjct: 559 SRSRSPTIKARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNRSPSRERRR 618
Query: 756 SKEIIESREINSVTKSR 772
S+ R N ++SR
Sbjct: 619 SRSRSRDRRTNRASRSR 635
>Y19188-1|CAB60727.1| 759|Homo sapiens aczonin protein.
Length = 759
Score = 31.9 bits (69), Expect = 9.4
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 189 PPSRDDSAYVSSSTMHSPPRGSPFRPLETDRSFR-----EPSV--EEDYRPIAPERKRQP 241
P + V T+H P +P E D + EPSV E+D P+A ++ +QP
Sbjct: 608 PEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQP 667
Query: 242 KL 243
K+
Sbjct: 668 KM 669
>BC111692-1|AAI11693.1| 620|Homo sapiens SR140 protein protein.
Length = 620
Score = 31.9 bits (69), Expect = 9.4
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 675 EERITKTPLYKTESLNRETSPFVSRLDS--RMKSPAIRRGSNSSDNYSETYRYTTRSGDP 732
+E+ TP K TSP SR S R+KSP+ + S S+ +++ ++RS
Sbjct: 504 KEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPK--SERSERSERSHKESSRSRSS 561
Query: 733 ERPSVTDTVEIVSKKVVPSRDGRSKEIIESRE-INSVTKSRGFKQEPLPSVKHVENGK 789
+ S D + + SR + SR S KSR + P S K + K
Sbjct: 562 HKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKNK 619
>BC039871-1|AAH39871.1| 757|Homo sapiens cell cycle progression 1
protein.
Length = 757
Score = 31.9 bits (69), Expect = 9.4
Identities = 22/86 (25%), Positives = 36/86 (41%)
Query: 35 EETRKKETSKWLESHFGSDSRSSHDSIAEEIGRPPEPFFKKKTIEDEGYFGKSSTGPPPP 94
EE +E E+ D S ++ PE F + +DE ++S P P
Sbjct: 115 EEIGNQEVVIVEEAQSSEDFNMGSSSSSQYTFCQPETVFSSQPSDDESSSDETSNQPSPA 174
Query: 95 VYGDRVLRKTKSSTPSDERPQANRTT 120
R +KT S++ S++R A + T
Sbjct: 175 FRRRRARKKTVSASESEDRLVAEQET 200
>BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 31.9 bits (69), Expect = 9.4
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 402 EHKYEGSSKRTAGHDAREHRDRGQFSSTLGRFSHSTSRLNPNSETEEDYKRSVQTLPRKL 461
+H+++ SS+R A + RDRG+ S +HS S N SE RS
Sbjct: 248 KHEHKSSSRREAREEKTRIRDRGRSSD-----AHS-SWYNGRSEGRSYRSRSRSRDKSHR 301
Query: 462 HDRKEKATEKPSSN 475
H R ++ E+ SSN
Sbjct: 302 HKRARRSRERESSN 315
>BC015203-1|AAH15203.1| 470|Homo sapiens Unknown (protein for
IMAGE:3916446) protein.
Length = 470
Score = 31.9 bits (69), Expect = 9.4
Identities = 22/86 (25%), Positives = 36/86 (41%)
Query: 35 EETRKKETSKWLESHFGSDSRSSHDSIAEEIGRPPEPFFKKKTIEDEGYFGKSSTGPPPP 94
EE +E E+ D S ++ PE F + +DE ++S P P
Sbjct: 115 EEIGNQEVVIVEEAQSSEDFNMGSSSSSQYTFCQPETVFSSQPSDDESSSDETSNQPSPA 174
Query: 95 VYGDRVLRKTKSSTPSDERPQANRTT 120
R +KT S++ S++R A + T
Sbjct: 175 FRRRRARKKTVSASESEDRLVAEQET 200
>BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for
IMAGE:2820942) protein.
Length = 1027
Score = 31.9 bits (69), Expect = 9.4
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 675 EERITKTPLYKTESLNRETSPFVSRLDS--RMKSPAIRRGSNSSDNYSETYRYTTRSGDP 732
+E+ TP K TSP SR S R+KSP+ + S S+ +++ ++RS
Sbjct: 911 KEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPK--SERSERSERSHKESSRSRSS 968
Query: 733 ERPSVTDTVEIVSKKVVPSRDGRSKEIIESRE-INSVTKSRGFKQEPLPSVKHVENGK 789
+ S D + + SR + SR S KSR + P S K + K
Sbjct: 969 HKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKNK 1026
>AL512443-2|CAH70059.1| 320|Homo sapiens zinc finger, RAN-binding
domain containing 2 protein.
Length = 320
Score = 31.9 bits (69), Expect = 9.4
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
Query: 624 DDTDKKKIFLKGLKERAPELYQT---LHADEESDGSRLSSRYGTPSPHYKERLSEERITK 680
DD D K L +E ++ + S SR SSR +PS S R +
Sbjct: 176 DDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSS 235
Query: 681 TPLYKTESLNRETSPFVSRLDSRMKSPAIRRGSNSSDNYSETYRYTTRSGDPER 734
+ ++ S +RE S SR S RGS+S S Y++ S PER
Sbjct: 236 SSQSRSRSSSRERSR--SRGSKSRSSSRSHRGSSSPRKRS----YSSSSSSPER 283
>AL512443-1|CAH70058.1| 330|Homo sapiens zinc finger, RAN-binding
domain containing 2 protein.
Length = 330
Score = 31.9 bits (69), Expect = 9.4
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
Query: 624 DDTDKKKIFLKGLKERAPELYQT---LHADEESDGSRLSSRYGTPSPHYKERLSEERITK 680
DD D K L +E ++ + S SR SSR +PS S R +
Sbjct: 176 DDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSS 235
Query: 681 TPLYKTESLNRETSPFVSRLDSRMKSPAIRRGSNSSDNYSETYRYTTRSGDPER 734
+ ++ S +RE S SR S RGS+S S Y++ S PER
Sbjct: 236 SSQSRSRSSSRERSR--SRGSKSRSSSRSHRGSSSPRKRS----YSSSSSSPER 283
>AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein
protein.
Length = 322
Score = 31.9 bits (69), Expect = 9.4
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 402 EHKYEGSSKRTAGHDAREHRDRGQFSSTLGRFSHSTSRLNPNSETEEDYKRSVQTLPRKL 461
+H+++ SS+R A + RDRG+ S +HS S N SE RS
Sbjct: 248 KHEHKSSSRREAREEKTRIRDRGRSSD-----AHS-SWYNGRSEGRSYRSRSRSRDKSHR 301
Query: 462 HDRKEKATEKPSSN 475
H R ++ E+ SSN
Sbjct: 302 HKRARRSRERESSN 315
>AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 31.9 bits (69), Expect = 9.4
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 402 EHKYEGSSKRTAGHDAREHRDRGQFSSTLGRFSHSTSRLNPNSETEEDYKRSVQTLPRKL 461
+H+++ SS+R A + RDRG+ S +HS S N SE RS
Sbjct: 248 KHEHKSSSRREAREEKTRIRDRGRSSD-----AHS-SWYNGRSEGRSYRSRSRSRDKSHR 301
Query: 462 HDRKEKATEKPSSN 475
H R ++ E+ SSN
Sbjct: 302 HKRARRSRERESSN 315
>AK222858-1|BAD96578.1| 330|Homo sapiens zinc finger protein 265
isoform 1 variant protein.
Length = 330
Score = 31.9 bits (69), Expect = 9.4
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
Query: 624 DDTDKKKIFLKGLKERAPELYQT---LHADEESDGSRLSSRYGTPSPHYKERLSEERITK 680
DD D K L +E ++ + S SR SSR +PS S R +
Sbjct: 176 DDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSS 235
Query: 681 TPLYKTESLNRETSPFVSRLDSRMKSPAIRRGSNSSDNYSETYRYTTRSGDPER 734
+ ++ S +RE S SR S RGS+S S Y++ S PER
Sbjct: 236 SSQSRSRSSSRERSR--SRGSKSRSSSRSHRGSSSPRKRS----YSSSSSSPER 283
>AK022459-1|BAB14042.1| 424|Homo sapiens protein ( Homo sapiens
cDNA FLJ12397 fis, clone MAMMA1002769, weakly similar to
Homo sapiens cell cycle progression restoration 8
protein ).
Length = 424
Score = 31.9 bits (69), Expect = 9.4
Identities = 22/86 (25%), Positives = 36/86 (41%)
Query: 35 EETRKKETSKWLESHFGSDSRSSHDSIAEEIGRPPEPFFKKKTIEDEGYFGKSSTGPPPP 94
EE +E E+ D S ++ PE F + +DE ++S P P
Sbjct: 115 EEIGNQEVVIVEEAQSSEDFNMGSSSSSQYTFCQPETVFSSQPSDDESSSDETSNQPSPA 174
Query: 95 VYGDRVLRKTKSSTPSDERPQANRTT 120
R +KT S++ S++R A + T
Sbjct: 175 FRRRRARKKTVSASESEDRLVAEQET 200
>AF212228-1|AAK14914.1| 755|Homo sapiens CCP8 protein.
Length = 755
Score = 31.9 bits (69), Expect = 9.4
Identities = 22/86 (25%), Positives = 36/86 (41%)
Query: 35 EETRKKETSKWLESHFGSDSRSSHDSIAEEIGRPPEPFFKKKTIEDEGYFGKSSTGPPPP 94
EE +E E+ D S ++ PE F + +DE ++S P P
Sbjct: 115 EEIGNQEVVIVEEAQSSEDFNMGSSSSSQYTFCQPETVFSSQPSDDESSSDETSNQPSPA 174
Query: 95 VYGDRVLRKTKSSTPSDERPQANRTT 120
R +KT S++ S++R A + T
Sbjct: 175 FRRRRARKKTVSASESEDRLVAEQET 200
>AB209568-1|BAD92805.1| 316|Homo sapiens zinc finger protein 265
isoform 1 variant protein.
Length = 316
Score = 31.9 bits (69), Expect = 9.4
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
Query: 624 DDTDKKKIFLKGLKERAPELYQT---LHADEESDGSRLSSRYGTPSPHYKERLSEERITK 680
DD D K L +E ++ + S SR SSR +PS S R +
Sbjct: 178 DDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSS 237
Query: 681 TPLYKTESLNRETSPFVSRLDSRMKSPAIRRGSNSSDNYSETYRYTTRSGDPER 734
+ ++ S +RE S SR S RGS+S S Y++ S PER
Sbjct: 238 SSQSRSRSSSRERSR--SRGSKSRSSSRSHRGSSSPRKRS----YSSSSSSPER 285
>AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein.
Length = 1028
Score = 31.9 bits (69), Expect = 9.4
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 675 EERITKTPLYKTESLNRETSPFVSRLDS--RMKSPAIRRGSNSSDNYSETYRYTTRSGDP 732
+E+ TP K TSP SR S R+KSP+ + S S+ +++ ++RS
Sbjct: 912 KEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPK--SERSERSERSHKESSRSRSS 969
Query: 733 ERPSVTDTVEIVSKKVVPSRDGRSKEIIESRE-INSVTKSRGFKQEPLPSVKHVENGK 789
+ S D + + SR + SR S KSR + P S K + K
Sbjct: 970 HKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKNK 1027
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.310 0.128 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,584,182
Number of Sequences: 224733
Number of extensions: 5270197
Number of successful extensions: 13364
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 13339
Number of HSP's gapped (non-prelim): 60
length of query: 818
length of database: 73,234,838
effective HSP length: 96
effective length of query: 722
effective length of database: 51,660,470
effective search space: 37298859340
effective search space used: 37298859340
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 69 (31.9 bits)
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