GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005436-TA|BGIBMGA005436-PA|undefined
         (90 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   5.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    19   9.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    19   9.6  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 14   QLVINGDNDSATALLQEKQAR 34
            Q   N D D+   + Q K+AR
Sbjct: 993  QTSANNDKDTNAVVTQSKEAR 1013


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 52  ILCFVNLINYMDRL 65
           I C +NL  Y+D+L
Sbjct: 152 IECSLNLETYLDKL 165


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 60  NYMDRLTIADGLGCQSQVLWVIFFHNKEKK 89
           NY D    +   G  S    V+F  NKE++
Sbjct: 137 NYNDNYFYSKSNGSNSSNSDVLFKQNKEEE 166


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.134    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,118
Number of Sequences: 429
Number of extensions: 673
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 90
length of database: 140,377
effective HSP length: 48
effective length of query: 42
effective length of database: 119,785
effective search space:  5030970
effective search space used:  5030970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.1 bits)
S2: 37 (19.0 bits)