GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005432-TA|BGIBMGA005432-PA|IPR002293|Amino
acid/polyamine transporter I
         (631 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    25   1.9  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    25   1.9  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    25   2.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   3.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    24   3.3  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    24   3.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    24   3.3  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   5.7  

>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 426 TKTLESIKSKVISKETEDRECLLLDEYAGCPSEDPISCSSGTRKIA 471
           T+ +  I  + +SK  ++ EC++  +Y  C  E          KIA
Sbjct: 89  TEDVHEIIEQCVSKAADEDECMVARKYIDCALEKMKFLDDELEKIA 134


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 426 TKTLESIKSKVISKETEDRECLLLDEYAGCPSEDPISCSSGTRKIA 471
           T+ +  I  + +SK  ++ EC++  +Y  C  E          KIA
Sbjct: 89  TEDVHEIIEQCVSKAADEDECMVARKYIDCALEKMKFLDDELEKIA 134


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 13/140 (9%)

Query: 236 FLTTGLPAIVLTGLCFLYTNMLKGSSVDAALPIT-------TLVEARSAGWVCPVLAAVT 288
           FLT   PA    G+   +   L  +S  A LPIT         +++R   +V  V A V 
Sbjct: 337 FLTRQNPAAFFRGMMQAWMTALGTASSAATLPITFRCLEENNKIDSRVTRFVVAVGATVN 396

Query: 289 VAGVCLSLTELCPLLFTVLVALASPEWKVLTRSMTYESTSTGS---PVLAVFTAGSLAAI 345
           + G  L    +  +    +  ++    +V+T S T    S G+   P  A+ T   L  +
Sbjct: 397 MDGTAL-YEAVAAIFIAQMNGISLGIGEVITVSFTATLASIGAASIPSAALIT--MLIVL 453

Query: 346 LAFACPLSHMITLMNASHLL 365
            A   P + +  L     +L
Sbjct: 454 TALGLPTNDISLLFAVDWML 473


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 357 TLMNASHLLSISIQAFHLMVMRCVPTLEQK 386
           T+M   H  + S  +F L VM C P +++K
Sbjct: 344 TIMFEGHDTTASGSSFFLAVMGCHPDIQEK 373


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 95  FMAMWMTFLSHLVAVAICARILSATADHVTGGRTRRWLFGY 135
           F+  W+ F +  +  AIC ++ +     VT      WL GY
Sbjct: 628 FLICWLPFFTCNIMDAICTKLTADCQPGVTAFIVTSWL-GY 667


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 559 PVKKPAIRNGVKISETLNLPHQFKDG 584
           PV +  +R G+  S TLN P  +  G
Sbjct: 266 PVTRGLVRRGILQSGTLNAPWSYMSG 291


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 559 PVKKPAIRNGVKISETLNLPHQFKDG 584
           PV +  +R G+  S TLN P  +  G
Sbjct: 266 PVTRGLVRRGILQSGTLNAPWSYMSG 291


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 201 PIPISIYELFAAGSPVCYAFSVVLP 225
           P P   YE+     P+ Y F+++LP
Sbjct: 199 PYPDITYEIRLRRRPMFYVFNLILP 223


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.136    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,737
Number of Sequences: 429
Number of extensions: 6172
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 8
length of query: 631
length of database: 140,377
effective HSP length: 62
effective length of query: 569
effective length of database: 113,779
effective search space: 64740251
effective search space used: 64740251
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 47 (23.0 bits)