Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005409-TA|BGIBMGA005409-PA|IPR006688|ADP-ribosylation
factor
(250 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1311 - 26039741-26039930,26040185-26040316,26040528-260406... 109 2e-24
06_03_0025 - 15577231-15577420,15577682-15577813,15578025-155781... 79 3e-15
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 62 5e-10
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 59 3e-09
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 58 5e-09
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 58 7e-09
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 58 9e-09
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 58 9e-09
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 56 3e-08
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 55 5e-08
03_02_0046 - 5255513-5255630,5255715-5255876,5256579-5256733,525... 54 8e-08
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 54 1e-07
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 51 8e-07
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 43 2e-04
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 43 2e-04
12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202 42 6e-04
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 42 6e-04
02_05_0639 - 30552148-30552265,30552362-30552523,30553177-305532... 41 8e-04
01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024 40 0.002
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 40 0.003
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 40 0.003
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 38 0.006
08_01_0414 + 3684491-3684589,3684770-3684838,3685004-3685033,368... 31 0.89
04_04_0794 + 28104725-28104829,28105721-28105762,28106470-281065... 29 4.7
10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301 28 6.2
09_01_0073 - 1057560-1058043,1058199-1058385,1058754-1059062,105... 28 6.2
04_04_1163 - 31398565-31398654,31398729-31398812,31398893-313990... 28 6.2
04_03_0922 + 20834195-20836603 28 6.2
11_06_0086 + 19914234-19914382,19914590-19914653,19914793-199148... 28 8.3
>08_02_1311 -
26039741-26039930,26040185-26040316,26040528-26040676,
26040807-26040893,26041338-26041420,26042008-26042137
Length = 256
Score = 109 bits (263), Expect = 2e-24
Identities = 73/224 (32%), Positives = 118/224 (52%), Gaps = 14/224 (6%)
Query: 19 PRYITLLSLIVLAVTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAY-SQYRQTFT 77
P + + +V L+ + + + N+++L GLS SGKT+LF +L S ++ T T
Sbjct: 24 PEQVYVAVAVVAVTVLLLVAVSCLKSSKANTIVLSGLSGSGKTILFYQLRDGSTHQGTVT 83
Query: 78 SMKENIEEYITSN--------KTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQ 129
SM++N + ++ + K + +VD+PG RL+ K E +A GIV+V+D+ +
Sbjct: 84 SMEQNNDTFVLHSELERRGKVKPVHVVDVPGHARLKPKLDEVLPQAA-GIVYVVDAQDFL 142
Query: 130 KEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLEKEINLVRVTKS 189
+ AEYLY IL + P+LI CNK D+ A + IK LEKE+N +R ++
Sbjct: 143 STMHAAAEYLYDILTKATVVKKRVPVLIFCNKTDKVTAHSKEFIKKQLEKELNKLRESR- 201
Query: 190 NQLQSVDPSEGNIGSFLGKEGKDFEFSHIRNKVEFAECSANTND 233
N + S D ++ LG G+ F FS +NKV E + T +
Sbjct: 202 NAISSADITD---EVKLGNPGEAFNFSQCQNKVTVTEGAGLTGN 242
>06_03_0025 -
15577231-15577420,15577682-15577813,15578025-15578173,
15579012-15579071,15593208-15593297,15593604-15593871,
15594517-15594608,15595355-15595441,15597333-15597440,
15597709-15597822,15598253-15598420,15599442-15599579,
15599699-15599908,15600986-15601237,15601965-15602111,
15603327-15603443
Length = 773
Score = 79.0 bits (186), Expect = 3e-15
Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 5/143 (3%)
Query: 91 KTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQG 150
K + +VD+PG L+ K E +A GIVF +D+ + ++ VAEYLY IL +
Sbjct: 622 KPVHVVDVPGHAGLKPKLDEVLPQAA-GIVFAVDAQDFLSTMQVVAEYLYDILTKATVVK 680
Query: 151 NTTPLLILCNKQDQPLAKGSQVIKGLLEKEINLVRVTKSNQLQSVDPSEGNIGSFLGKEG 210
+LI CNK D+ A + IK LEKEIN +R ++ + + S D ++ LG G
Sbjct: 681 KRIHVLIFCNKTDKVTAHSKEFIKKQLEKEINKLRESRKD-ISSADTTD---EVKLGNPG 736
Query: 211 KDFEFSHIRNKVEFAECSANTND 233
+ F FS +N+V AE + T +
Sbjct: 737 ETFYFSQCQNRVTVAEGAGLTGN 759
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/114 (28%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 50 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 109
V+++GL +GKT + RL + T ++ N+E+ N + D+ GQE+LR +
Sbjct: 20 VVMLGLDAAGKTTILYRLHMGEVLSTVPTVGFNVEKVQYKNVVFTVWDVGGQEKLR-PLW 78
Query: 110 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 163
+ + S++ +++V+DS++ ++ I D + TI+ DP++ + +L+ NKQD
Sbjct: 79 KMYLSNSDALIYVVDSLD-RERIIDARQEFQTIIKDPLMANSI--ILVFANKQD 129
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 59.3 bits (137), Expect = 3e-09
Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Query: 39 IFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDL 98
+F T VL++GL +GKT + RL + + ++ N+E+ N + D+
Sbjct: 8 LFDSFCTKEMKVLMLGLDAAGKTTILYRLHIGEVLSSIPTIGFNVEKVEYKNVAFTVWDV 67
Query: 99 PGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLIL 158
GQ++LR + Q+ +A +++V+DS++ ++ I E I+ DP++ + +L+L
Sbjct: 68 GGQDKLR-PLWRQYFRNADALIYVVDSMD-RERIGVAKEEFQAIIRDPLMLNSV--ILLL 123
Query: 159 CNKQDQPLAKGSQVI 173
NKQD A S +
Sbjct: 124 ANKQDLKGAMSSSEV 138
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 58.4 bits (135), Expect = 5e-09
Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 34 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 92
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 93 LKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 152
+ D+ GQ+++R + + + +G++FV+DS N ++ + + + L+ +L + ++
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRERVVEARDELHRMLNEDELR--D 118
Query: 153 TPLLILCNKQDQPLAKGSQVI 173
LL+ NKQD P A + I
Sbjct: 119 AVLLVFANKQDLPNAMNAAEI 139
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 58.0 bits (134), Expect = 7e-09
Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 34 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 92
L F +FSR ++ + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 93 LKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 152
+ D+ GQ+++R + + + +G++FV+DS N + + + + L+ +L + ++
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELHRMLNEDELR--D 118
Query: 153 TPLLILCNKQDQPLAKGSQVI 173
LL+ NKQD P A + I
Sbjct: 119 AVLLVFANKQDLPNAMNAAEI 139
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 57.6 bits (133), Expect = 9e-09
Identities = 37/141 (26%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 34 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 92
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 126 LAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 185
Query: 93 LKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 152
+ D+ GQ+++R + + + +G++FV+DS N + + + + L+ +L + ++
Sbjct: 186 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELHRMLNEDELR--D 241
Query: 153 TPLLILCNKQDQPLAKGSQVI 173
LL+ NKQD P A + I
Sbjct: 242 AVLLVFANKQDLPNAMNAAEI 262
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 57.6 bits (133), Expect = 9e-09
Identities = 37/141 (26%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 34 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 92
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 93 LKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 152
+ D+ GQ+++R + + + +G++FV+DS N + + + + L+ +L + ++
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELHRMLNEDELR--D 118
Query: 153 TPLLILCNKQDQPLAKGSQVI 173
LL+ NKQD P A + I
Sbjct: 119 AVLLVFANKQDLPNAMNAAEI 139
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/114 (27%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 50 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 109
V+++GL +GKT + +L + T ++ N+E+ N + D+ GQE+LR +
Sbjct: 20 VVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGGQEKLR-PLW 78
Query: 110 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 163
+ ++ G+++V+DS++ ++ + AE+ I+ DP++ + +L+ NKQD
Sbjct: 79 RHYFNNTDGLIYVVDSLDRERIGKAKAEF-QAIVNDPLMLNSV--ILVFANKQD 129
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/114 (28%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 50 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 109
V+++GL +GKT + +L + T ++ N+E+ N + D+ GQE+LR +
Sbjct: 20 VVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVVFTVWDVGGQEKLR-PLW 78
Query: 110 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 163
+ ++ +++V+DS++ ++ R AE+ I+ DP + + LL+ NKQD
Sbjct: 79 RHYFNNTDALIYVVDSLDRERIGRARAEF-QAIINDPFMLNSV--LLVFANKQD 129
>03_02_0046 -
5255513-5255630,5255715-5255876,5256579-5256733,
5256811-5256892,5257790-5257827
Length = 184
Score = 54.4 bits (125), Expect = 8e-08
Identities = 37/131 (28%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 38 WIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQ-TFTSMKENIEEYITSNKTLKIV 96
W+ S + + L+GL ++GKT L +A + + ++ N+ + N T+K+
Sbjct: 10 WLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGFSEDMIPTVGFNMRKVTKGNVTIKLW 69
Query: 97 DLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLL 156
DL GQ R R+ +E++ + IV+V+D+ + ++ + L+ +L P + G PLL
Sbjct: 70 DLGGQPRFRS-MWERYCRAVSAIVYVVDAAD-RENMAIAKSELHDLLSKPSLTG--IPLL 125
Query: 157 ILCNKQDQPLA 167
++ NK D+P A
Sbjct: 126 VIGNKIDKPEA 136
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 53.6 bits (123), Expect = 1e-07
Identities = 37/145 (25%), Positives = 74/145 (51%), Gaps = 7/145 (4%)
Query: 34 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 92
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 93 LKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCD----PII 148
+ D+ GQ+++R + + + +G++FV+DS N ++ + + + L+ +L +
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRERVVEARDELHRMLNELQNWKKD 120
Query: 149 QGNTTPLLILCNKQDQPLAKGSQVI 173
+ LL+ NKQD P A + I
Sbjct: 121 ELRDAVLLVFANKQDLPNAMNAAEI 145
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 51.2 bits (117), Expect = 8e-07
Identities = 35/126 (27%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 50 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 109
+L++GL +SGKT + +++ ++ NI+ +L I D+ GQ+ +R+ ++
Sbjct: 19 ILMVGLDNSGKTTIVLKINGEDTGVISPTLGFNIKTIKYHKYSLNIWDIGGQKTIRS-YW 77
Query: 110 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD-QPLAK 168
+ G+V+V+DS +I++ + D L+ +L + + G LL+ NKQD Q K
Sbjct: 78 RNYFEQTDGLVWVVDSSDIRR-LDDCRAELHNLLKEERLAG--ASLLVFANKQDIQGALK 134
Query: 169 GSQVIK 174
S++ K
Sbjct: 135 PSEIAK 140
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 50 VLLMGLSDSGKTLLF--VRLAYSQ-----YRQTFTSMKENIEEYITSNKTLKIVDLPGQE 102
V+++G+ +GKT L V+ Y + + + ++ NI +N L DL GQ
Sbjct: 153 VVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIEDANVKLVFWDLGGQP 212
Query: 103 RLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQ 162
LR +E++ A +++VIDS D L +L +QG PLLI NKQ
Sbjct: 213 GLRT-IWEKYYEEAHAVIYVIDSA-AASSFEDAKSALEKVLHHEDLQG--VPLLIFANKQ 268
Query: 163 DQPLA 167
+ P A
Sbjct: 269 ELPAA 273
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 34 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQ----------YRQTFTSMKE- 81
L F +FSR + + +L++GL +GKT + +L + Y +++K
Sbjct: 3 LAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIDIYLYVLSNLKAI 62
Query: 82 ------NIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDV 135
N+E N + + D+ GQ+++R + + + +G++FV+DS N + + +
Sbjct: 63 TEEKGFNVETVEYKNISFTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRDRVVEA 120
Query: 136 AEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVI 173
+ L+ +L + ++ LL+ NKQD P A + I
Sbjct: 121 RDELHRMLNEDELR--DAVLLVFANKQDLPNAMNAAEI 156
>12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202
Length = 193
Score = 41.5 bits (93), Expect = 6e-04
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 50 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 109
+L +GL ++GKT L L + Q + EE K DL G + + + +
Sbjct: 23 ILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQ-IARRVW 81
Query: 110 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKG 169
+ + + +V+++D+ + ++ + + L +L D + T P LIL NK D P A
Sbjct: 82 KDYYAKVDAVVYLVDAYD-KERFSESKKELDALLSDDSLA--TVPFLILGNKIDIPYAAS 138
Query: 170 SQVIK 174
+ ++
Sbjct: 139 EEELR 143
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 41.5 bits (93), Expect = 6e-04
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 11/123 (8%)
Query: 50 VLLMGLSDSGKTLLFVRLAYSQYR-------QTFTSMKENIEEYITSNKTLKIVDLPGQE 102
VL++G+ +GKT L ++ + + ++ NI +N L DL GQ
Sbjct: 20 VLILGVDKAGKTTLLEKIKSIYLKGEGLTPDRIVPTVGLNIGRIEDANAKLVFWDLGGQV 79
Query: 103 RLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQ 162
LR +E++ A I++VID+ D L +L ++G PLLI NKQ
Sbjct: 80 GLRT-IWEKYYQEAHAIIYVIDAA-AASSFEDAKSALEKVLRHEDLKG--APLLIFANKQ 135
Query: 163 DQP 165
D P
Sbjct: 136 DLP 138
>02_05_0639 -
30552148-30552265,30552362-30552523,30553177-30553298,
30553515-30553596,30554407-30554699
Length = 258
Score = 41.1 bits (92), Expect = 8e-04
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 52 LMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQ 111
L+GL ++GKT L +A N+ + N T+K+ DL GQ R R +E+
Sbjct: 109 LVGLQNAGKTSLVNAVAVGF----------NMRKVTKGNVTIKLWDLGGQRRFRT-MWER 157
Query: 112 HKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQ 171
+ I++V+D+ + + I L+ +L + G PLL+L NK D+ A Q
Sbjct: 158 YCRGVSAILYVVDAAD-RDSIPIAKSELHDLLTKQSLAG--IPLLVLGNKIDKSEAVSKQ 214
Query: 172 VIKGLLEKEI 181
+ L E+
Sbjct: 215 ALVDQLGLEL 224
>01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024
Length = 193
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 50 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 109
+L +GL ++GKT L L + Q + EE K DL G + + + +
Sbjct: 23 ILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQ-IARRVW 81
Query: 110 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKG 169
+ + + +V+++D+ + ++ + + L +L D + P LIL NK D P A
Sbjct: 82 KDYYAKVDAVVYLVDAYD-KERFAESKKELDALLSDDSLA--AVPFLILGNKIDIPYAAS 138
Query: 170 SQVIK 174
+ ++
Sbjct: 139 EEELR 143
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 39.5 bits (88), Expect = 0.003
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 50 VLLMGLSDSGKTLLFVRLAYSQYRQTFTS---MKENIEEYITSNKTLK--IVDLPGQERL 104
+LL+G S GK+ L +R A Y ++ S + I KT+K I D GQER
Sbjct: 27 LLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERF 86
Query: 105 RNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 163
R + A GI+ V D + Q+ +V ++L I D N LL+ NK D
Sbjct: 87 RT-ITSSYYRGAHGIIIVYD-VTDQESFNNVKQWLNEI--DRYASDNVNKLLV-GNKSD 140
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 39.5 bits (88), Expect = 0.003
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 50 VLLMGLSDSGKTLLFVRLAYSQYRQTFTS---MKENIEEYITSNKTLK--IVDLPGQERL 104
+LL+G S GK+ L +R A Y ++ S + I KT+K I D GQER
Sbjct: 11 LLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERF 70
Query: 105 RNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 163
R + A GI+ V D + Q+ +V ++L I D N LL+ NK D
Sbjct: 71 RT-ITSSYYRGAHGIIIVYD-VTDQESFNNVKQWLNEI--DRYASDNVNKLLV-GNKSD 124
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 38.3 bits (85), Expect = 0.006
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 50 VLLMGLSDSGKTLLFVRLAYSQYRQTFTS---MKENIEEYITSNKTLK--IVDLPGQERL 104
+LL+G S GK+ L +R A Y +++ S + I KT+K I D GQER
Sbjct: 11 LLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERF 70
Query: 105 RNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLI 157
R + A GI+ V D + Q+ +V ++L I D N LL+
Sbjct: 71 RT-ITSSYYRGAHGIIVVYD-VTDQESFNNVKQWLNEI--DRYASENVNKLLV 119
>08_01_0414 +
3684491-3684589,3684770-3684838,3685004-3685033,
3685540-3685596,3685884-3685954,3686185-3686266,
3686470-3686559,3686647-3686685
Length = 178
Score = 31.1 bits (67), Expect = 0.89
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Query: 69 YSQYRQTFTSMKENIE--EYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSI 126
Y + S+ NIE E + L ++DL + + +Q K V D
Sbjct: 51 YQMFIYVIKSLHSNIELLELTNFSMCLTMIDLCFEVAAALEKIDQFVEEQKLDVLSSDKT 110
Query: 127 NIQ-------KEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLE 178
NI+ K +D EYL +++ + + N I K+D LA G QV++ L++
Sbjct: 111 NIEDTKQMISKAKKDEVEYLKSLIEEVEEKNNAMKARIELLKKDDDLAAGKQVLEKLMQ 169
>04_04_0794 +
28104725-28104829,28105721-28105762,28106470-28106544,
28106811-28106950,28107036-28107093,28107239-28107241,
28107740-28107849,28108562-28108648,28108773-28108856,
28109212-28109277,28109377-28109488,28109949-28110149
Length = 360
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 121 FVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLIL 158
F ++++ +E+ V YLY LCDP + P+L+L
Sbjct: 285 FFLEAVPPLEELNTVNLYLYIQLCDPRARLVVLPILVL 322
>10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301
Length = 1116
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 75 TFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQ 129
T TS KE I I NK D+ G +++ N+ + G ++ID I I+
Sbjct: 431 TLTSWKE-IVHTIDDNKAEVSTDMSGIKKIHNQLAHNVEVYINGTKYIIDEITIR 484
>09_01_0073 -
1057560-1058043,1058199-1058385,1058754-1059062,
1059427-1060269,1061572-1062552,1063189-1063516
Length = 1043
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 75 TFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQ 129
T TS KE I I NK D+ G +++ N+ + G ++ID I I+
Sbjct: 431 TLTSWKE-IVHTIDDNKAEVSTDMSGIKKIHNQLAHNVEVYINGTKYIIDEITIR 484
>04_04_1163 -
31398565-31398654,31398729-31398812,31398893-31399037,
31399118-31399239,31399338-31399376,31399491-31399601,
31399682-31399804,31399946-31400032,31400136-31400207,
31400349-31400621,31400704-31400895,31400988-31401171,
31401339-31401480,31401578-31401821,31401959-31402603,
31403024-31403293
Length = 940
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 27 LIVLAVTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMK--ENIE 84
L + + L++ +FS + R+ VLL G +GKTLL +A ++ F S+K E I
Sbjct: 670 LDTIQLPLLYKHLFSSKLGKRSGVLLYGPPGTGKTLLAKAVA-TECSLNFLSVKGPELIN 728
Query: 85 EYI 87
Y+
Sbjct: 729 MYV 731
>04_03_0922 + 20834195-20836603
Length = 802
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 22 ITLLSLIVLAVTLIFWWIFSRRY 44
++ +L +LA+ L+ WW S+RY
Sbjct: 456 LSFAALFMLAIALVIWWNKSKRY 478
>11_06_0086 +
19914234-19914382,19914590-19914653,19914793-19914882,
19915000-19915056,19915147-19915195,19915393-19915469,
19915686-19915725,19915813-19915907,19916007-19916171,
19916317-19916427,19916515-19916602,19916691-19916757,
19916822-19916939,19917022-19917139,19917398-19917643,
19917736-19917833,19917961-19918143,19918237-19918356,
19918515-19918565
Length = 661
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 163 DQPLAKGSQVIKGLLEKEINLVRVTKSNQLQSVDPSEGNIGSFLGKEGKDFEFSHIRNKV 222
+Q + G + K L + N R+TKS L S+ GN L K K E S +K+
Sbjct: 331 NQKIQSGGMIAKSLFQYAYNYSRITKSVTLSSLISKLGN----LRKGLKQDEASPFFDKI 386
Query: 223 EFAE 226
F++
Sbjct: 387 VFSK 390
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.136 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,591,111
Number of Sequences: 37544
Number of extensions: 252577
Number of successful extensions: 692
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 672
Number of HSP's gapped (non-prelim): 30
length of query: 250
length of database: 14,793,348
effective HSP length: 80
effective length of query: 170
effective length of database: 11,789,828
effective search space: 2004270760
effective search space used: 2004270760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -