BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005408-TA|BGIBMGA005408-PA|IPR013217|Methyltransferase
type 12
(272 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 1.3
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 2.2
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 3.9
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.1
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 22 5.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.1
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 22 5.1
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 5.1
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 6.7
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 6.7
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 6.7
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 6.7
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 6.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 6.7
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 8.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 8.9
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 8.9
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 21 8.9
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 204 LSSETIYNESNYVKIITLFKNRLNN-NGSVFLAAKSVYFGV 243
LS++TI+N +NY + N NN N + + K +Y+ +
Sbjct: 318 LSNKTIHNNNNYNN--NNYNNNYNNYNNNNYNNYKKLYYNI 356
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.4 bits (48), Expect = 2.2
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 55 ETVIRHIMPTKIIAELKNKELQNVLNTAEKEHSDLVTGK 93
E VI+H + +I +L+ K+L++ L E E + + GK
Sbjct: 358 EKVIKHDILRMLIIDLRKKQLKS-LEDWENEMNIITKGK 395
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 3.9
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 10 GAESEVEHKDDEEISWLASEEVKPDKQIKE 39
G+ SE E K D+E W EE +IKE
Sbjct: 429 GSISE-EQKFDDEAHWELEEESLQGSKIKE 457
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
Query: 185 GDWTHFNNFLPNNEQFDIILSSETIYNESNYV 216
G WT+ N Q D++LSSET + S+++
Sbjct: 130 GSWTYDGN------QVDLVLSSETGGDLSDFI 155
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
Query: 185 GDWTHFNNFLPNNEQFDIILSSETIYNESNYV 216
G WT+ N Q D++LSSET + S+++
Sbjct: 130 GSWTYDGN------QVDLVLSSETGGDLSDFI 155
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
Query: 185 GDWTHFNNFLPNNEQFDIILSSETIYNESNYV 216
G WT+ N Q D++LSSET + S+++
Sbjct: 130 GSWTYDGN------QVDLVLSSETGGDLSDFI 155
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
Query: 185 GDWTHFNNFLPNNEQFDIILSSETIYNESNYV 216
G WT+ N Q D++LSSET + S+++
Sbjct: 130 GSWTYDGN------QVDLVLSSETGGDLSDFI 155
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
Query: 185 GDWTHFNNFLPNNEQFDIILSSETIYNESNYV 216
G WT+ N Q D++LSSET + S+++
Sbjct: 130 GSWTYDGN------QVDLVLSSETGGDLSDFI 155
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
Query: 185 GDWTHFNNFLPNNEQFDIILSSETIYNESNYV 216
G WT+ N Q D++LSSET + S+++
Sbjct: 130 GSWTYDGN------QVDLVLSSETGGDLSDFI 155
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 22.2 bits (45), Expect = 5.1
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 187 WTHFNNFLPNNEQFDIILSSETIYNESNYVK 217
WT NN P E FD + + I N + +K
Sbjct: 194 WT--NNIFPRGELFDATVFTYNITNSTPLLK 222
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
Query: 185 GDWTHFNNFLPNNEQFDIILSSETIYNESNYV 216
G WT+ N Q D++LSSET + S+++
Sbjct: 198 GSWTYDGN------QVDLVLSSETGGDLSDFI 223
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
Query: 185 GDWTHFNNFLPNNEQFDIILSSETIYNESNYV 216
G WT+ N Q D++LSSET + S+++
Sbjct: 198 GSWTYDGN------QVDLVLSSETGGDLSDFI 223
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 22.2 bits (45), Expect = 5.1
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 187 WTHFNNFLPNNEQFDIILSSETIYNESNYVK 217
WT NN P E FD + + I N + +K
Sbjct: 209 WT--NNIFPRGELFDATVFTYNITNSTPLLK 237
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 22.2 bits (45), Expect = 5.1
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 187 WTHFNNFLPNNEQFDIILSSETIYNESNYVK 217
WT NN P E FD + + I N + +K
Sbjct: 97 WT--NNIFPKGELFDATVFTYNITNSTPLLK 125
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 77 NVLNTAEKEHSDLVTGKYEGGLK 99
N L T EK+++++VT ++ LK
Sbjct: 408 NDLLTTEKDNNEIVTAQFLNQLK 430
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 204 LSSETIYNESNYVKIITLFKNRLNNN 229
LS++TI+N +NY N NNN
Sbjct: 85 LSNKTIHNNNNYKYNYNNKYNYNNNN 110
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 6.7
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 204 LSSETIYNESNYVKIITLFKNRLNNN 229
LS++TI+N +NY N NNN
Sbjct: 85 LSNKTIHNNNNYK--YNYNNNNYNNN 108
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 6.7
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 204 LSSETIYNESNYVKIITLFKNRLNNN 229
LS++TI+N +NY N NNN
Sbjct: 85 LSNKTIHNNNNYK--YNYNNNNYNNN 108
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 6.7
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 204 LSSETIYNESNYVKIITLFKNRLNNN 229
LS++TI+N +NY N NNN
Sbjct: 85 LSNKTIHNNNNYK--YNYNNNNYNNN 108
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 6.7
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 204 LSSETIYNESNYVKIITLFKNRLNNN 229
LS++TI+N +NY N NNN
Sbjct: 318 LSNKTIHNNNNYK--YNYNNNNYNNN 341
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Query: 202 IILSSETIYNESNYVKIITLFKNRLNNN 229
II S Y SNY + N NNN
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNYNNN 108
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Query: 202 IILSSETIYNESNYVKIITLFKNRLNNN 229
II S Y SNY + N NNN
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNYNNN 108
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 8.9
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 204 LSSETIYNESNYVKIITLFKNRLNNNGSVFLAAKSVYFGV 243
LS++TI+N +NY N N N + + K +Y+ +
Sbjct: 85 LSNKTIHNNNNY---NNNNYNNYNYNNNNYNNYKKLYYNI 121
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 21.4 bits (43), Expect = 8.9
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 188 THFNNFLPNNEQFDIILSSETIYNESNYVKII 219
T N+ NN + +L + +NE + V I+
Sbjct: 11 TGLENWRVNNSNYTELLPIDMRFNEGHIVSIV 42
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.316 0.135 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,079
Number of Sequences: 429
Number of extensions: 3770
Number of successful extensions: 29
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 24
length of query: 272
length of database: 140,377
effective HSP length: 57
effective length of query: 215
effective length of database: 115,924
effective search space: 24923660
effective search space used: 24923660
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 43 (21.4 bits)
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