Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005407-TA|BGIBMGA005407-PA|IPR002110|Ankyrin,
IPR007858|Dpy-30
(369 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 44 3e-05
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 42 1e-04
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 36 0.012
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 33 0.049
SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+, L-... 33 0.085
SPBC1711.10c |npl4||Cdc48-Ufd1-Npl4 complex component Npl4 |Schi... 33 0.085
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 31 0.26
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 30 0.60
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.79
SPBC947.13 |rba50||RNA polymerase II associated protein |Schizos... 28 1.8
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 28 1.8
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 28 1.8
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 28 2.4
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 27 3.2
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 27 4.2
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 5.6
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 27 5.6
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 7.4
SPBC651.01c |nog1|SPBC725.18c|GTP binding protein Nog1 |Schizosa... 26 7.4
SPBC3D6.03c |||tRNA endonuclease |Schizosaccharomyces pombe|chr ... 26 9.8
SPBC32F12.10 |||phosphoglucomutase |Schizosaccharomyces pombe|ch... 26 9.8
SPAP27G11.05c |vps41||vacuolar protein sorting-associated protei... 26 9.8
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 26 9.8
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 26 9.8
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 26 9.8
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 44.4 bits (100), Expect = 3e-05
Identities = 29/102 (28%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 245 SLHGAVRRGDMTTMQRILSTGDGRNLARSQNSFGRTALHVAVLAQHEDIVEQLAQNYPEL 304
SL A +G++ T++ ++S+ + + + G TALH A L Q I + L ++ ++
Sbjct: 3 SLFLAASQGELDTVKNLISSE--KIDVNATDEGGATALHWAALNQQIPICKFLLEHGADV 60
Query: 305 LRIGDNLERTPLHYAMGVEKIESLSRVLIKAGAKRVLKDLKG 346
IG +L+ P+H+A ++++ L++ GA +LKD +G
Sbjct: 61 NAIGGDLQAAPIHWAAKRGSVKTV-HYLVQHGADPLLKDKQG 101
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 41.9 bits (94), Expect = 1e-04
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 291 EDIVEQLAQNYPELLRIGDNLERTPLHYAMGVEKIESLSRVLIKAGAKRVLKDLKGRQPS 350
E+ VEQ QN P L D+ +RTPLH+A V K+ ++ +L + K KD G P
Sbjct: 16 EEYVEQAIQNDPNSLNAVDDDKRTPLHWACSVGKVNTIYFLLKQPNIKPDEKDEAGWTPL 75
Query: 351 YYFMNKSDI 359
+N +
Sbjct: 76 MISINNRSV 84
Score = 39.5 bits (88), Expect = 7e-04
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 278 GRTALHVAVLAQHEDIVEQLAQNYPELLRIGDNLERTPLHYAMGVEKIESLSRVLIKAGA 337
G+T LH A IV+ L PEL+R D +TPLH A V KI+ + + LI A
Sbjct: 107 GQTCLHYAAGKGRLSIVQLLCDKAPELIRKKDLQGQTPLHRAAAVGKIQ-VVKYLISQRA 165
Query: 338 KRVLKDLKGRQPSYY 352
D G P ++
Sbjct: 166 PLNTSDSYGFTPLHF 180
Score = 29.5 bits (63), Expect = 0.79
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 20/187 (10%)
Query: 122 DEHGQSMLHFAAARTHARNALFQLLQESEISLGYRDELYRTARDVSIQ-ANVPENTAEID 180
D+ ++ LH+A + N ++ LL++ I +DE T +SI +VP+N E
Sbjct: 34 DDDKRTPLHWACSVGKV-NTIYFLLKQPNIKPDEKDEAGWTPLMISINNRSVPDNVIE-- 90
Query: 181 KWVLHLAARGNKDKITELLLEGYDHILDVIDEEG-VAITDVVAQRDDPEMSRLLASIPSF 239
L R + D + G L +G ++I ++ + PE+ R
Sbjct: 91 ----ELINRSDVDPT--ITTRGGQTCLHYAAGKGRLSIVQLLCDKA-PELIR-----KKD 138
Query: 240 EESRESLHGAVRRGDMTTMQRILSTGDGRNLARSQNSFGRTALHVAVLAQHEDIVEQLAQ 299
+ + LH A G + ++ ++S R + +S+G T LH A+ H D+ +L +
Sbjct: 139 LQGQTPLHRAAAVGKIQVVKYLISQ---RAPLNTSDSYGFTPLHFALAEGHPDVGVELVR 195
Query: 300 NYPELLR 306
+ LR
Sbjct: 196 AGADTLR 202
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 35.5 bits (78), Expect = 0.012
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 263 STGDGRNLARSQNS-FGRTALHVAVLAQHEDIVEQLAQNYPELLRIGDNLE-RTPLHYAM 320
S G+ L +Q +GRT LH+AV V L Q+ + + D T LH A+
Sbjct: 36 SEKSGQKLRINQKDRYGRTVLHIAVSENKNSFVRSLLQHKGIDVFVQDEESGYTALHRAI 95
Query: 321 GVEKIESLSRVLIKAGAKRVL--KDLKGRQPSYYFMNK 356
V +E+ S +L K + R L KD +G P + F+++
Sbjct: 96 YVGNLEAASLLLSKDPSFRSLRIKDKEGLSP-FQFLSR 132
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 33.5 bits (73), Expect = 0.049
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 240 EESRESLHGAVRRGDMTTMQRILSTGDGRNLARSQNSFGRTALHVAVLAQHEDIVEQLAQ 299
E LH A G + +Q+I+ + + + +QN G TA+H A L H +I + L +
Sbjct: 34 ENGNSGLHMASANGHIAVVQKIIPYLN-KEVINAQNESGNTAMHWAALNGHAEICKLLLE 92
Query: 300 NYPELLRIGDNLERTPLHYA 319
+ I + E++P++ A
Sbjct: 93 AGGD-PHIKNIYEKSPIYEA 111
>SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+,
L-lysine forming] |Schizosaccharomyces pombe|chr
1|||Manual
Length = 368
Score = 32.7 bits (71), Expect = 0.085
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 59 LVTHESAEVENEQNPEPL----ETMDQPRSETRTETRAHRPIDVITVDPQPIISPDAPET 114
+V S + N NP P+ T D P E + T P++VI++D P + P
Sbjct: 274 VVCDVSCDTTNPNNPIPIYNVNTTFDHPTVEVKGVTTPP-PLEVISIDHLPTLLPRESSE 332
Query: 115 AFSSA 119
AFS A
Sbjct: 333 AFSEA 337
>SPBC1711.10c |npl4||Cdc48-Ufd1-Npl4 complex component Npl4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 545
Score = 32.7 bits (71), Expect = 0.085
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 26 NVKPKDPVAFL-ASFLQNFPESEKPLLMTQESNMLVTHESAE 66
N KP PV+FL + FPE PL +++++ T ES +
Sbjct: 454 NAKPAFPVSFLLVTLTDGFPEKPDPLFSNNDTSIITTLESTD 495
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 31.1 bits (67), Expect = 0.26
Identities = 37/149 (24%), Positives = 56/149 (37%), Gaps = 4/149 (2%)
Query: 184 LHLAARGNKDKITELLLEGYDHILDVIDEEGVAITDVVAQRDDPEMSRLLASIPSFEESR 243
LHLAA + I E LL D ++++ V + + + E +R
Sbjct: 93 LHLAAMAGRQDIVEALLLHPDINYNLVNANNKKAYQVATSPQLMDFMKGFYVTYTKETAR 152
Query: 244 ESLHGAVRRG--DMTTMQRILSTGDGRNLARSQNSFGRTALHVAVLAQHEDIVEQLAQNY 301
E R M + R D +L G+T LHVA A+ ++V+ L N
Sbjct: 153 EFKKAFKERNLESMDYLMRHNEFNDAIDLNEVDIKTGQTYLHVATKAKDAELVKWLLDNG 212
Query: 302 PELLRIGDNLERTPLHYAMGVEKIESLSR 330
+ R D + P Y E + SL R
Sbjct: 213 ADPYR-RDKFGKLPTDYTKD-ENMRSLLR 239
Score = 27.9 bits (59), Expect = 2.4
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 238 SFEESRESLHGAVRRGDMTTMQRILSTGDGRNLARSQNSFGRTALHVAVLAQHEDIVEQL 297
S +E +L +++ ++ ++ ILS D A +N T LH+A +A +DIVE L
Sbjct: 51 SKDECTHALFISIQCANVQMVKHILSVFDVDVNAYDKNK--NTPLHLAAMAGRQDIVEAL 108
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 29.9 bits (64), Expect = 0.60
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 1 MEEAYEDNVFTALGDPLIKGLTEVANVKPKDPVAFLASFLQNFPESEKP--LLMTQESNM 58
++E D FT+ + + +TEV + P + + E P + M E N
Sbjct: 953 LDETKADMQFTSEKPSVDESITEVDDAIKDGPPVLAETLTNSLMEDVGPENVDMDIEDNE 1012
Query: 59 LVTHESAE------VENEQNPEPLETMDQ 81
+ T++S VENE++P+P E +DQ
Sbjct: 1013 IFTNQSTMSVPSMLVENEESPKPDEYIDQ 1041
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.5 bits (63), Expect = 0.79
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 8 NVFTALGDPLIKGLTEVANVKPKDPVAFLASFLQNFPESEKPLLMTQESNMLVTHESAEV 67
+ FT++ PLI + ++K D + ++ Q SEK LL + E L+ E +
Sbjct: 32 DAFTSILIPLISKSKDYESIK-NDRIVTEVNYEQQLRNSEKKLLQSNERYDLLEDERKLL 90
Query: 68 ENE 70
ENE
Sbjct: 91 ENE 93
>SPBC947.13 |rba50||RNA polymerase II associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 93 HRPIDVITVDPQ-PIISPDAPETAFSSANRDEHGQSMLHFAAARTHARNALFQLLQESEI 151
H P +T+DP P + F + DE LH + ++ + + L EI
Sbjct: 265 HLPEKQVTLDPNDPSFYEQLHDKYFPNLPVDEKQMQWLHDPSPAENSYHPSVESLHAHEI 324
Query: 152 SLGYRDELYRTARDVSIQAN 171
G++ E+ ++ +I N
Sbjct: 325 RFGFKGEIITPSQSQTIPVN 344
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 28.3 bits (60), Expect = 1.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 338 KRVLKDLKGRQPSYYFMNKSDILRLKEEEDV 368
+++ +D + QPS F+++ D L K EDV
Sbjct: 362 RKIFEDARAHQPSIIFIDEIDALAPKRTEDV 392
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 28.3 bits (60), Expect = 1.8
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 104 QPIISPDAPETAFSSANRDEHGQSMLHFAAARTHARNALFQLLQESEISLGYRDELYRTA 163
Q I P P AFS + EHG+ +++ H R +F S+I + E+Y T
Sbjct: 331 QDIPIPAVPNEAFSFSGYGEHGRFLIN----HEHMRLRVFFSSCCSKI----QSEIYSTN 382
Query: 164 RD-VSIQANVPENTAEIDK 181
R+ +S+ V + + E+DK
Sbjct: 383 RNLLSVLQTVEQISKEVDK 401
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 27.9 bits (59), Expect = 2.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 228 EMSRLLASIPSFEESRESLHGAVRRGDMTTMQRILSTGDGRNLARSQNSFGRTALHVAVL 287
++S+ L S +ES L + G T +L +G NL S FG ++L +L
Sbjct: 863 QLSKHLLSETKQDESFSELAKIFQEGSNITSHELLHSGLIHNLLLSLKKFGSSSLRTFLL 922
Query: 288 AQH 290
A +
Sbjct: 923 AMN 925
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 27.5 bits (58), Expect = 3.2
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Query: 236 IPSFEESRESLHGAVRRGDMTTMQRILSTGDGRNLARSQNSFGRTALHVAVLAQHEDIVE 295
I +E ++SL V+ G MQR+ + D R Q++ L Q +E
Sbjct: 322 ISRLQEEKDSLLKKVQEGASLAMQRVQNKHDLEK-KRLQSAIQPLQEENNSLKQQ---IE 377
Query: 296 QLAQNYPELLRIGDNLERTPLHYAMGVEKIESLSRVL 332
QL + + +NL+ + + V+K+ES +R L
Sbjct: 378 QLQRELASETVVKENLKSSLDQQSANVQKLESTNRAL 414
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 27.1 bits (57), Expect = 4.2
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 15 DPLIKGLTEVANVKPKDPVAFLASFLQNFPESEKPLLMTQESN 57
D +IKG V N+ PK+P L L PE K L +N
Sbjct: 805 DNIIKGFLRVTNIPPKEP---LKPSLDTSPELSKYSLAKLSNN 844
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 5.6
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 25 ANVKPKDPVAFLASFLQNFPESEKPLLMTQESNMLVTHE--SAEVENEQNPEPLETMDQ 81
A ++P+ + +A ++F ++EK + ES LV E SAE NE + T+++
Sbjct: 628 AKIEPEVQMTNVAIDQRSFEQAEKSPISVSESTSLVEVEKPSAEGTNEHKQDATMTLEK 686
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 26.6 bits (56), Expect = 5.6
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 53 TQESNMLVTHESAEVENEQNPEPLETMDQPRSETRTETRAHRPIDVITVDPQPIISPDAP 112
T + L++H++ + E + L T P+ E R+ET + P D + + Q S
Sbjct: 39 TFQKKDLISHKN-DFERTMRHDVLHT--NPKIEVRSETHIYEPNDSLFKENQDFPSNPTA 95
Query: 113 ETAFSSAN 120
+ SS+N
Sbjct: 96 HSPSSSSN 103
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 26.2 bits (55), Expect = 7.4
Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 4/93 (4%)
Query: 37 ASFLQNFPESEKPLLMTQESNMLVTHESAEVENEQNPEPLETMDQPRSETRTETRAHRPI 96
+S N P +E+P+ E++ T + N P ++ T+ P
Sbjct: 204 SSVTSNPPHTEEPVAAKPEASSTATKGPRPTTSASNTNTSPANGAPTNKPSTDINTTDPA 263
Query: 97 DVIT---VDPQPIISPDA-PETAFSSANRDEHG 125
T P +S + P S +NR HG
Sbjct: 264 TQTTQVSASNSPALSGSSTPSNTSSRSNRQNHG 296
>SPBC651.01c |nog1|SPBC725.18c|GTP binding protein Nog1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 7.4
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 277 FGRTALHVAV--LAQHEDIVEQLAQNYPELLRIGDNLER 313
+ R L +A+ L+ + +VE +A++Y LL+ GD+L R
Sbjct: 87 YDRDHLKIALSQLSTAKHLVENVARDYIRLLKYGDSLYR 125
>SPBC3D6.03c |||tRNA endonuclease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 678
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 250 VRRGDMTTMQRILSTGDGRNLARSQNSFGRTALHVAVLAQHEDIVEQLA 298
V GD ++++ G G +L +++F H A+ QH E L+
Sbjct: 573 VYSGDTRPNEKLVKAGIGASLLLHESTFEDDLKHEAIQRQHSTASEALS 621
>SPBC32F12.10 |||phosphoglucomutase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 25.8 bits (54), Expect = 9.8
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 263 STGDG-RNLARSQNSFGRTALHVAVLAQHEDIV 294
S GDG RN+ N+F + VA++A H +++
Sbjct: 277 SDGDGDRNMIYGANAFVTPSDSVAIIAHHAELI 309
>SPAP27G11.05c |vps41||vacuolar protein sorting-associated protein
Vps41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 886
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 174 ENTAEIDKWVLHLAARGNKDKITELLLEGYDHILDVIDE 212
+N AE ++WV A + + I + L G +H+ ++ E
Sbjct: 420 DNLAEWEQWVFVFAENDHLEDIADFLPTGENHLSPLVYE 458
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 25.8 bits (54), Expect = 9.8
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 261 ILSTGDGRNLARSQNSFGRTALHVAVLAQHEDIVEQLAQNYPEL 304
IL TGD + N F RT + LA +ED+V ++ + +P++
Sbjct: 127 ILWTGDNSR-HDNDNHFPRTQSEI--LASNEDLVNKMIEAFPDV 167
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.8 bits (54), Expect = 9.8
Identities = 25/131 (19%), Positives = 54/131 (41%), Gaps = 8/131 (6%)
Query: 58 MLVTHESAEVENEQNPEPLETMDQPRSETRTE--TRAHRPIDVITV-DPQPIISPDAPET 114
+LV ++ VE ++ EP+ET + +E +T+ + + ++ V D + D T
Sbjct: 494 ILVVEQAYIVEEQEVEEPVETSPEEEAEKKTDEPVKMRKVKKLVKVADLSVSVQEDRLPT 553
Query: 115 AFSSANRDEHGQSML--HFAAARTHARNALFQLLQESEISLGYRDELYRTARDVSIQANV 172
R+ Q + A +NAL + + ++ L D++Y + +
Sbjct: 554 EVLEKYREAEHQMIATDKLVAETVDRKNALEEYIYDTRAKL---DDIYAPFTNEEESSKF 610
Query: 173 PENTAEIDKWV 183
E + + W+
Sbjct: 611 KEMLTKAEDWL 621
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 25.8 bits (54), Expect = 9.8
Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 59 LVTHESAEVENEQNPEPLETMDQPRSETR-TETRAHRPIDVITVDPQPIISPDAPE--TA 115
++ H++ E + E + E ET D+ +SE + E + QP S D + T+
Sbjct: 192 ILQHDNKEEDKEIHSEENETKDEIKSEKKEPEIKKQEGGSSTEKVGQPSSSDDKAKGSTS 251
Query: 116 FSSANRDEHGQSMLHFAAARTHARNALFQLLQESEISLGYRD---ELYRTARDVSIQANV 172
+ +E S + +T + +L ++ S ++ G D ++ R DV+ Q N
Sbjct: 252 KDQPSEEEEKTSDIQDRKIKTPIKPSLLGKIR-SSVNKGMTDVASQVNRGMTDVASQVNK 310
Query: 173 PEN--TAEIDKWVLHLAARGNK 192
N ++++K + +A + NK
Sbjct: 311 GVNGVASQVNKGMNGVANQVNK 332
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.131 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,648,584
Number of Sequences: 5004
Number of extensions: 68222
Number of successful extensions: 192
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 176
Number of HSP's gapped (non-prelim): 33
length of query: 369
length of database: 2,362,478
effective HSP length: 74
effective length of query: 295
effective length of database: 1,992,182
effective search space: 587693690
effective search space used: 587693690
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 54 (25.8 bits)
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