GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005406-TA|BGIBMGA005406-PA|IPR002110|Ankyrin,
IPR000749|ATP:guanido phosphotransferase
         (674 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   116   5e-28
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    64   4e-12
M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee homeobox-...    25   2.0  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   8.2  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  116 bits (280), Expect = 5e-28
 Identities = 104/387 (26%), Positives = 174/387 (44%), Gaps = 56/387 (14%)

Query: 261 LSASSNKATPPLVLGRFLKKPVFDAIKRRITKLDHDLFDVIWPAVKKIPDNKNIVQTVEE 320
           LS+S +K+    +L ++L K VFD +K + T  D  L D I   ++ +            
Sbjct: 17  LSSSDSKS----LLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENL------------ 60

Query: 321 DFPGGITAPDYYVYDVFHEFLIPLLKDLHNINVNTDIPIHPQSDFKQSLKISSESVVEVN 380
           D   GI APD   Y +F +   P+++D H     TD   HP  DF     +        N
Sbjct: 61  DSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFKKTDK--HPPKDFGDVDSLG-------N 111

Query: 381 IDPNDEFVLSGTIECSRNLNGFELPLNLKVGKLETIERILTKILMHEDFVKLSQQTNPES 440
           +DP +EF++S  + C R+L G+  P N            LT+    E   K+S   +   
Sbjct: 112 LDPANEFIVSTRVRCGRSLEGY--PFN----------PCLTEAQYKEMEEKVSSTLSGLE 159

Query: 441 EQKGGSYYTLNEVLEKPSEISAQLASSGLLIALCDRDEIDDYMRLHG--KHWPYGRGVFV 498
            +  G++Y L  + +   E   +L     L    DR     +++     + WP GRG++ 
Sbjct: 160 GELKGTFYPLTGMSK---ETQQKLIDDHFLFKEGDR-----FLQAANACRFWPTGRGIYH 211

Query: 499 SEDKTIAIWINVHDHIRVLVSTSVDAPGEIGLPFTKLSFIMRYLHAKLDFVWHEKLGHLS 558
           ++DKT  +W N  DH+R++   S+   G++G  + +L   +  +  +L F  +++LG L+
Sbjct: 212 NDDKTFLVWCNEEDHLRII---SMQMGGDLGQVYRRLVHAVNEIEKRLLFSHNDRLGFLT 268

Query: 559 SRPTFLGAGIRFSLIINFPGLSKDPENMKHLCAMRGLQYRET------LSPDIARISNYQ 612
             PT LG  +R S+ I  P L+ +   ++ +     LQ R T          I  ISN +
Sbjct: 269 FCPTNLGTTVRASVHIKLPKLAANRAKLEEIAGKFNLQVRGTRGEHTEAEGGIYDISNKR 328

Query: 613 CLSITETNCFNDFITASSNLLHLENDL 639
            L +TE     +     + L+ LE +L
Sbjct: 329 RLGLTEYQAVKEMHDGIAELIKLEKEL 355


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 64.1 bits (149), Expect = 4e-12
 Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 47/245 (19%)

Query: 261 LSASSNKATPPLVLGRFLKKPVFDAIKRRITKLDHDLFDVIWPAVKKIPDNKNIVQTVEE 320
           LS+S +K+    +L ++L K VFD +K + T  D  L D I   ++ +            
Sbjct: 1   LSSSDSKS----LLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENL------------ 44

Query: 321 DFPGGITAPDYYVYDVFHEFLIPLLKDLHNINVNTDIPIHPQSDFKQSLKISSESVVEVN 380
           D   GI APD   Y +F +   P+++D H     TD   HP  DF     +        N
Sbjct: 45  DSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFKKTDK--HPPKDFGDVDSLG-------N 95

Query: 381 IDPNDEFVLSGTIECSRNLNGFELPLNLKVGKLETIERILTKILMHEDFVKLSQQTNPES 440
           +DP +EF++S  + C R+L G+  P N            LT+    E   K+S   +   
Sbjct: 96  LDPANEFIVSTRVRCGRSLEGY--PFN----------PCLTEAQYKEMEEKVSSTLSGLE 143

Query: 441 EQKGGSYYTLNEVLEKPSEISAQLASSGLLIALCDRDEIDDYMRLHG--KHWPYGRGVFV 498
            +  G++Y L  +     E   +L     L       E D +++     + WP GRG++ 
Sbjct: 144 GELKGTFYPLTGM---SKETQQKLIDDHFLF-----KEGDRFLQAANAXRFWPTGRGIYH 195

Query: 499 SEDKT 503
           ++DKT
Sbjct: 196 NDDKT 200


>M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E30. ).
          Length = 109

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)

Query: 198 ELLRDFGLTEEAIKTLFSDKES 219
           +L RD GLTE  IK  F +K +
Sbjct: 52  QLSRDLGLTEAQIKIWFQNKRA 73


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 18/65 (27%), Positives = 23/65 (35%), Gaps = 1/65 (1%)

Query: 54  KLQNSFHFQHLCIHINFDFNFQQKINKVHLAAKEGNLKDLQAALDRRKFAIARDPISPNG 113
           K    FH Q L    N     Q        A+ E +L     A     +A   +  SP G
Sbjct: 8   KYHQQFHHQQLFSSAN-PGTIQACTTSPATASLESSLSAAAVAAAAVNYAQQHNSPSPTG 66

Query: 114 STPLH 118
           S+P H
Sbjct: 67  SSPQH 71


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.136    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,927
Number of Sequences: 429
Number of extensions: 8280
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 6
length of query: 674
length of database: 140,377
effective HSP length: 62
effective length of query: 612
effective length of database: 113,779
effective search space: 69632748
effective search space used: 69632748
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)