Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005404-TA|BGIBMGA005404-PA|undefined
(390 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein. 36 0.19
BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor, argini... 36 0.19
AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor, argini... 36 0.19
BX538178-1|CAD98052.1| 1175|Homo sapiens hypothetical protein pr... 33 1.7
BX538177-1|CAD98051.1| 1175|Homo sapiens hypothetical protein pr... 33 1.7
AK126804-1|BAC86701.1| 969|Homo sapiens protein ( Homo sapiens ... 33 1.7
AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein. 33 1.7
AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein. 33 1.7
AB019602-1|BAA77349.1| 2158|Homo sapiens IDN3-B protein. 33 1.7
AB019494-1|BAA77335.1| 2265|Homo sapiens IDN3 protein. 33 1.7
AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor, argini... 33 2.3
BC112273-1|AAI12274.1| 830|Homo sapiens kinesin family member 7... 32 3.0
BC112271-1|AAI12272.1| 830|Homo sapiens kinesin family member 7... 32 3.0
BC104044-1|AAI04045.1| 830|Homo sapiens kinesin family member 7... 32 3.0
AY358384-1|AAQ88750.1| 830|Homo sapiens EQYK340 protein. 32 3.0
EF015905-1|ABM64216.1| 1255|Homo sapiens period 2 protein. 31 7.0
AC012485-1|AAX88976.1| 1255|Homo sapiens unknown protein. 31 7.0
AB002345-1|BAA20804.2| 1281|Homo sapiens KIAA0347 protein protein. 31 7.0
BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase... 31 9.2
BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase... 31 9.2
BC006430-1|AAH06430.1| 402|Homo sapiens Unknown (protein for IM... 31 9.2
AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase... 31 9.2
AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase... 31 9.2
AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens ... 31 9.2
AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein. 31 9.2
AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein pr... 31 9.2
>BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein.
Length = 508
Score = 36.3 bits (80), Expect = 0.19
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 244 KNRQTSEDMIANDQNRGSEIVSDKRRLDESSHKYPKSHD----KLGTSDLHHKNRIRIDE 299
K ++ +D + S+ + +KR+ D+ S P+S++ +S + R R
Sbjct: 331 KEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSS 390
Query: 300 CSPGPSNTVRSTSNREPTCCYRTSNATKSDKHYD 333
SP S T++ S+R P+ R K +K D
Sbjct: 391 RSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERD 424
>BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 36.3 bits (80), Expect = 0.19
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 244 KNRQTSEDMIANDQNRGSEIVSDKRRLDESSHKYPKSHD----KLGTSDLHHKNRIRIDE 299
K ++ +D + S+ + +KR+ D+ S P+S++ +S + R R
Sbjct: 331 KEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSS 390
Query: 300 CSPGPSNTVRSTSNREPTCCYRTSNATKSDKHYD 333
SP S T++ S+R P+ R K +K D
Sbjct: 391 RSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERD 424
>AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 36.3 bits (80), Expect = 0.19
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 244 KNRQTSEDMIANDQNRGSEIVSDKRRLDESSHKYPKSHD----KLGTSDLHHKNRIRIDE 299
K ++ +D + S+ + +KR+ D+ S P+S++ +S + R R
Sbjct: 331 KEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSS 390
Query: 300 CSPGPSNTVRSTSNREPTCCYRTSNATKSDKHYD 333
SP S T++ S+R P+ R K +K D
Sbjct: 391 RSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERD 424
>BX538178-1|CAD98052.1| 1175|Homo sapiens hypothetical protein
protein.
Length = 1175
Score = 33.1 bits (72), Expect = 1.7
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 229 RPAVGKTGDIIVASHKNRQTSEDMIANDQNRG--SEIVSDKRRLDESSHKYPKSHDKLGT 286
RP + + H N+Q S+D ++++RG S + + S +++ D T
Sbjct: 804 RPDGRSVSESLRRDHDNKQKSDDRGESERHRGDQSRVRRPETLRSSSRNEHGIKSDSSKT 863
Query: 287 SDLHHKNRIRIDECSPGPSNTVRSTSNREPTCCYRTSNATKSDK 330
L K+R + PS+ + + P SN ++SDK
Sbjct: 864 DKLERKHRHESGDSRERPSSGEQKSRPDSPRVKQGDSNKSRSDK 907
>BX538177-1|CAD98051.1| 1175|Homo sapiens hypothetical protein
protein.
Length = 1175
Score = 33.1 bits (72), Expect = 1.7
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 229 RPAVGKTGDIIVASHKNRQTSEDMIANDQNRG--SEIVSDKRRLDESSHKYPKSHDKLGT 286
RP + + H N+Q S+D ++++RG S + + S +++ D T
Sbjct: 804 RPDGRSVSESLRRDHDNKQKSDDRGESERHRGDQSRVRRPETLRSSSRNEHGIKSDSSKT 863
Query: 287 SDLHHKNRIRIDECSPGPSNTVRSTSNREPTCCYRTSNATKSDK 330
L K+R + PS+ + + P SN ++SDK
Sbjct: 864 DKLERKHRHESGDSRERPSSGEQKSRPDSPRVKQGDSNKSRSDK 907
>AK126804-1|BAC86701.1| 969|Homo sapiens protein ( Homo sapiens
cDNA FLJ44854 fis, clone BRACE3052410, highly similar
to Homo sapiens IDN3 protein (IDN3). ).
Length = 969
Score = 33.1 bits (72), Expect = 1.7
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 229 RPAVGKTGDIIVASHKNRQTSEDMIANDQNRG--SEIVSDKRRLDESSHKYPKSHDKLGT 286
RP + + H N+Q S+D ++++RG S + + S +++ D T
Sbjct: 672 RPDGRSVSESLRRDHDNKQKSDDRGESERHRGDQSRVRRPETLRSSSRNEHGIKSDSSKT 731
Query: 287 SDLHHKNRIRIDECSPGPSNTVRSTSNREPTCCYRTSNATKSDK 330
L K+R + PS+ + + P SN ++SDK
Sbjct: 732 DKLERKHRHESGDSRERPSSGEQKSRPDSPRVKQGDSNKSRSDK 775
>AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein.
Length = 2697
Score = 33.1 bits (72), Expect = 1.7
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 229 RPAVGKTGDIIVASHKNRQTSEDMIANDQNRG--SEIVSDKRRLDESSHKYPKSHDKLGT 286
RP + + H N+Q S+D ++++RG S + + S +++ D T
Sbjct: 804 RPDGRSVSESLRRDHDNKQKSDDRGESERHRGDQSRVRRPETLRSSSRNEHGIKSDSSKT 863
Query: 287 SDLHHKNRIRIDECSPGPSNTVRSTSNREPTCCYRTSNATKSDK 330
L K+R + PS+ + + P SN ++SDK
Sbjct: 864 DKLERKHRHESGDSRERPSSGEQKSRPDSPRVKQGDSNKSRSDK 907
>AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein.
Length = 2804
Score = 33.1 bits (72), Expect = 1.7
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 229 RPAVGKTGDIIVASHKNRQTSEDMIANDQNRG--SEIVSDKRRLDESSHKYPKSHDKLGT 286
RP + + H N+Q S+D ++++RG S + + S +++ D T
Sbjct: 804 RPDGRSVSESLRRDHDNKQKSDDRGESERHRGDQSRVRRPETLRSSSRNEHGIKSDSSKT 863
Query: 287 SDLHHKNRIRIDECSPGPSNTVRSTSNREPTCCYRTSNATKSDK 330
L K+R + PS+ + + P SN ++SDK
Sbjct: 864 DKLERKHRHESGDSRERPSSGEQKSRPDSPRVKQGDSNKSRSDK 907
>AB019602-1|BAA77349.1| 2158|Homo sapiens IDN3-B protein.
Length = 2158
Score = 33.1 bits (72), Expect = 1.7
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 229 RPAVGKTGDIIVASHKNRQTSEDMIANDQNRG--SEIVSDKRRLDESSHKYPKSHDKLGT 286
RP + + H N+Q S+D ++++RG S + + S +++ D T
Sbjct: 265 RPDGRSVSESLRRDHDNKQKSDDRGESERHRGDQSRVRRPETLRSSSRNEHGIKSDSSKT 324
Query: 287 SDLHHKNRIRIDECSPGPSNTVRSTSNREPTCCYRTSNATKSDK 330
L K+R + PS+ + + P SN ++SDK
Sbjct: 325 DKLERKHRHESGDSRERPSSGEQKSRPDSPRVKQGDSNKSRSDK 368
>AB019494-1|BAA77335.1| 2265|Homo sapiens IDN3 protein.
Length = 2265
Score = 33.1 bits (72), Expect = 1.7
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 229 RPAVGKTGDIIVASHKNRQTSEDMIANDQNRG--SEIVSDKRRLDESSHKYPKSHDKLGT 286
RP + + H N+Q S+D ++++RG S + + S +++ D T
Sbjct: 265 RPDGRSVSESLRRDHDNKQKSDDRGESERHRGDQSRVRRPETLRSSSRNEHGIKSDSSKT 324
Query: 287 SDLHHKNRIRIDECSPGPSNTVRSTSNREPTCCYRTSNATKSDK 330
L K+R + PS+ + + P SN ++SDK
Sbjct: 325 DKLERKHRHESGDSRERPSSGEQKSRPDSPRVKQGDSNKSRSDK 368
>AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor,
arginine/serine-rich 12 variant protein.
Length = 206
Score = 32.7 bits (71), Expect = 2.3
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 244 KNRQTSEDMIANDQNRGSEIVSDKRRLDESSHKYPKSHD----KLGTSDLHHKNRIRIDE 299
K ++ +D + S+ + +KR+ D+ S P+S++ +S + R R
Sbjct: 122 KEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSS 181
Query: 300 CSPGPSNTVRSTSNREPT 317
SP S T++ S+R P+
Sbjct: 182 RSPRTSKTIKRKSSRSPS 199
>BC112273-1|AAI12274.1| 830|Homo sapiens kinesin family member 7
protein.
Length = 830
Score = 32.3 bits (70), Expect = 3.0
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 190 RGELQR-LIDSLLRERVAHVERRKRRHYRIVKLNHRHENCRPAVG-KTGDIIVASHKNRQ 247
+G+LQR L + ++R E KR+H R+ +L +HE + + KT +I K R
Sbjct: 322 QGQLQRRLREETEQKRRLEAEMSKRQH-RVKELELKHEQQQKILKIKTEEIAAFQRKRRS 380
Query: 248 TSEDMIANDQNRGSEIVSDKRRLDESSHK---YPKSHDKLGTSDLHHKNRI 295
S + + + + +I K+ LD+ K ++ ++LG +LH + I
Sbjct: 381 GSNGSVVSLEQQ-QKIEEQKKWLDQEMEKVLQQRRALEELG-EELHKREAI 429
>BC112271-1|AAI12272.1| 830|Homo sapiens kinesin family member 7
protein.
Length = 830
Score = 32.3 bits (70), Expect = 3.0
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 190 RGELQR-LIDSLLRERVAHVERRKRRHYRIVKLNHRHENCRPAVG-KTGDIIVASHKNRQ 247
+G+LQR L + ++R E KR+H R+ +L +HE + + KT +I K R
Sbjct: 322 QGQLQRRLREETEQKRRLEAEMSKRQH-RVKELELKHEQQQKILKIKTEEIAAFQRKRRS 380
Query: 248 TSEDMIANDQNRGSEIVSDKRRLDESSHK---YPKSHDKLGTSDLHHKNRI 295
S + + + + +I K+ LD+ K ++ ++LG +LH + I
Sbjct: 381 GSNGSVVSLEQQ-QKIEEQKKWLDQEMEKVLQQRRALEELG-EELHKREAI 429
>BC104044-1|AAI04045.1| 830|Homo sapiens kinesin family member 7
protein.
Length = 830
Score = 32.3 bits (70), Expect = 3.0
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 190 RGELQR-LIDSLLRERVAHVERRKRRHYRIVKLNHRHENCRPAVG-KTGDIIVASHKNRQ 247
+G+LQR L + ++R E KR+H R+ +L +HE + + KT +I K R
Sbjct: 322 QGQLQRRLREETEQKRRLEAEMSKRQH-RVKELELKHEQQQKILKIKTEEIAAFQRKRRS 380
Query: 248 TSEDMIANDQNRGSEIVSDKRRLDESSHK---YPKSHDKLGTSDLHHKNRI 295
S + + + + +I K+ LD+ K ++ ++LG +LH + I
Sbjct: 381 GSNGSVVSLEQQ-QKIEEQKKWLDQEMEKVLQQRRALEELG-EELHKREAI 429
>AY358384-1|AAQ88750.1| 830|Homo sapiens EQYK340 protein.
Length = 830
Score = 32.3 bits (70), Expect = 3.0
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 190 RGELQR-LIDSLLRERVAHVERRKRRHYRIVKLNHRHENCRPAVG-KTGDIIVASHKNRQ 247
+G+LQR L + ++R E KR+H R+ +L +HE + + KT +I K R
Sbjct: 322 QGQLQRRLREETEQKRRLEAEMSKRQH-RVKELELKHEQQQKILKIKTEEIAAFQRKRRS 380
Query: 248 TSEDMIANDQNRGSEIVSDKRRLDESSHK---YPKSHDKLGTSDLHHKNRI 295
S + + + + +I K+ LD+ K ++ ++LG +LH + I
Sbjct: 381 GSNGSVVSLEQQ-QKIEEQKKWLDQEMEKVLQQRRALEELG-EELHKREAI 429
>EF015905-1|ABM64216.1| 1255|Homo sapiens period 2 protein.
Length = 1255
Score = 31.1 bits (67), Expect = 7.0
Identities = 36/172 (20%), Positives = 64/172 (37%), Gaps = 9/172 (5%)
Query: 179 HPERCSERCTTRGELQRLIDSLLRERVAHVERRKRRHYRIVKLNHRHENCRPAVGKTGDI 238
HP C+E +Q L + + R + V Y + N HE+ + +T
Sbjct: 447 HP--CTEEKALHPSIQELTEQIHRLLLQPVPHSGSSGYGSLGSNGSHEHL---MSQTSSS 501
Query: 239 IVASHKNRQTSEDMIANDQNRGSEIVSDKRRLDESSHKYPKSHDKLGTSDLHHKNRI-RI 297
H++ + I + G++ + ES + KS ++ T+ K + +
Sbjct: 502 DSNGHEDSRRRRAEICKN---GNKTKNRSHYSHESGEQKKKSVTEMQTNPPAEKKAVPAM 558
Query: 298 DECSPGPSNTVRSTSNREPTCCYRTSNATKSDKHYDEPCNDMCFHKESSSKP 349
++ S G S +PTC Y+ + S Y E CN+ K P
Sbjct: 559 EKDSLGVSFPEELACKNQPTCSYQQISCLDSVIRYLESCNEAATLKRKCEFP 610
>AC012485-1|AAX88976.1| 1255|Homo sapiens unknown protein.
Length = 1255
Score = 31.1 bits (67), Expect = 7.0
Identities = 36/172 (20%), Positives = 64/172 (37%), Gaps = 9/172 (5%)
Query: 179 HPERCSERCTTRGELQRLIDSLLRERVAHVERRKRRHYRIVKLNHRHENCRPAVGKTGDI 238
HP C+E +Q L + + R + V Y + N HE+ + +T
Sbjct: 447 HP--CTEEKALHPSIQELTEQIHRLLLQPVPHSGSSGYGSLGSNGSHEHL---MSQTSSS 501
Query: 239 IVASHKNRQTSEDMIANDQNRGSEIVSDKRRLDESSHKYPKSHDKLGTSDLHHKNRI-RI 297
H++ + I + G++ + ES + KS ++ T+ K + +
Sbjct: 502 DSNGHEDSRRRRAEICKN---GNKTKNRSHYSHESGEQKKKSVTEMQTNPPAEKKAVPAM 558
Query: 298 DECSPGPSNTVRSTSNREPTCCYRTSNATKSDKHYDEPCNDMCFHKESSSKP 349
++ S G S +PTC Y+ + S Y E CN+ K P
Sbjct: 559 EKDSLGVSFPEELACKNQPTCSYQQISCLDSVIRYLESCNEAATLKRKCEFP 610
>AB002345-1|BAA20804.2| 1281|Homo sapiens KIAA0347 protein protein.
Length = 1281
Score = 31.1 bits (67), Expect = 7.0
Identities = 36/172 (20%), Positives = 64/172 (37%), Gaps = 9/172 (5%)
Query: 179 HPERCSERCTTRGELQRLIDSLLRERVAHVERRKRRHYRIVKLNHRHENCRPAVGKTGDI 238
HP C+E +Q L + + R + V Y + N HE+ + +T
Sbjct: 473 HP--CTEEKALHPSIQELTEQIHRLLLQPVPHSGSSGYGSLGSNGSHEHL---MSQTSSS 527
Query: 239 IVASHKNRQTSEDMIANDQNRGSEIVSDKRRLDESSHKYPKSHDKLGTSDLHHKNRI-RI 297
H++ + I + G++ + ES + KS ++ T+ K + +
Sbjct: 528 DSNGHEDSRRRRAEICKN---GNKTKNRSHYSHESGEQKKKSVTEMQTNPPAEKKAVPAM 584
Query: 298 DECSPGPSNTVRSTSNREPTCCYRTSNATKSDKHYDEPCNDMCFHKESSSKP 349
++ S G S +PTC Y+ + S Y E CN+ K P
Sbjct: 585 EKDSLGVSFPEELACKNQPTCSYQQISCLDSVIRYLESCNEAATLKRKCEFP 636
>BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase,
18 protein.
Length = 1043
Score = 30.7 bits (66), Expect = 9.2
Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Query: 8 PNLQLSSSDEETKDSMMRSNSASGRPGCSYIQQYSHIPETS--AFQRYAHQTPLSPSKAT 65
P L+ T D M +SNS G+ C + P S A + P SP A
Sbjct: 61 PEFFLAGKQPCTND-MAKSNSV-GQDSCQDSEGDMIFPAESSCALPQEGSAGPGSPGSAP 118
Query: 66 TLEKEH-NSEQYGRDFT---TYDGITARGRRQCASVPCKRDDAPRLAAE 110
K +SE+ T +DG++ + R SVPC R R AE
Sbjct: 119 PSRKRSWSSEEESNQATGTSRWDGVSKKAPRHHLSVPCTRPREARQEAE 167
>BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase,
18 protein.
Length = 1043
Score = 30.7 bits (66), Expect = 9.2
Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Query: 8 PNLQLSSSDEETKDSMMRSNSASGRPGCSYIQQYSHIPETS--AFQRYAHQTPLSPSKAT 65
P L+ T D M +SNS G+ C + P S A + P SP A
Sbjct: 61 PEFFLAGKQPCTND-MAKSNSV-GQDSCQDSEGDMIFPAESSCALPQEGSAGPGSPGSAP 118
Query: 66 TLEKEH-NSEQYGRDFT---TYDGITARGRRQCASVPCKRDDAPRLAAE 110
K +SE+ T +DG++ + R SVPC R R AE
Sbjct: 119 PSRKRSWSSEEESNQATGTSRWDGVSKKAPRHHLSVPCTRPREARQEAE 167
>BC006430-1|AAH06430.1| 402|Homo sapiens Unknown (protein for
IMAGE:3546002) protein.
Length = 402
Score = 30.7 bits (66), Expect = 9.2
Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Query: 8 PNLQLSSSDEETKDSMMRSNSASGRPGCSYIQQYSHIPETS--AFQRYAHQTPLSPSKAT 65
P L+ T D M +SNS G+ C + P S A + P SP A
Sbjct: 5 PEFFLAGKQPCTND-MAKSNSV-GQDSCQDSEGDMIFPAESSCALPQEGSAGPGSPGSAP 62
Query: 66 TLEKEH-NSEQYGRDFT---TYDGITARGRRQCASVPCKRDDAPRLAAE 110
K +SE+ T +DG++ + R SVPC R R AE
Sbjct: 63 PSRKRSWSSEEESNQATGTSRWDGVSKKAPRHHLSVPCTRPREARQEAE 111
>AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase,
18 protein.
Length = 1094
Score = 30.7 bits (66), Expect = 9.2
Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Query: 8 PNLQLSSSDEETKDSMMRSNSASGRPGCSYIQQYSHIPETS--AFQRYAHQTPLSPSKAT 65
P L+ T D M +SNS G+ C + P S A + P SP A
Sbjct: 112 PEFFLAGKQPCTND-MAKSNSV-GQDSCQDSEGDMIFPAESSCALPQEGSAGPGSPGSAP 169
Query: 66 TLEKEH-NSEQYGRDFT---TYDGITARGRRQCASVPCKRDDAPRLAAE 110
K +SE+ T +DG++ + R SVPC R R AE
Sbjct: 170 PSRKRSWSSEEESNQATGTSRWDGVSKKAPRHHLSVPCTRPREARQEAE 218
>AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase,
18 protein.
Length = 1043
Score = 30.7 bits (66), Expect = 9.2
Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Query: 8 PNLQLSSSDEETKDSMMRSNSASGRPGCSYIQQYSHIPETS--AFQRYAHQTPLSPSKAT 65
P L+ T D M +SNS G+ C + P S A + P SP A
Sbjct: 61 PEFFLAGKQPCTND-MAKSNSV-GQDSCQDSEGDMIFPAESSCALPQEGSAGPGSPGSAP 118
Query: 66 TLEKEH-NSEQYGRDFT---TYDGITARGRRQCASVPCKRDDAPRLAAE 110
K +SE+ T +DG++ + R SVPC R R AE
Sbjct: 119 PSRKRSWSSEEESNQATGTSRWDGVSKKAPRHHLSVPCTRPREARQEAE 167
>AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens
cDNA FLJ38024 fis, clone CTONG2012996, highly similar to
Mus musculus F-box protein FBX18 mRNA. ).
Length = 1043
Score = 30.7 bits (66), Expect = 9.2
Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Query: 8 PNLQLSSSDEETKDSMMRSNSASGRPGCSYIQQYSHIPETS--AFQRYAHQTPLSPSKAT 65
P L+ T D M +SNS G+ C + P S A + P SP A
Sbjct: 61 PEFFLAGKQPCTND-MAKSNSV-GQDSCQDSEGDMIFPAESSCALPQEGSAGPGSPGSAP 118
Query: 66 TLEKEH-NSEQYGRDFT---TYDGITARGRRQCASVPCKRDDAPRLAAE 110
K +SE+ T +DG++ + R SVPC R R AE
Sbjct: 119 PSRKRSWSSEEESNQATGTSRWDGVSKKAPRHHLSVPCTRPREARQEAE 167
>AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein.
Length = 1043
Score = 30.7 bits (66), Expect = 9.2
Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Query: 8 PNLQLSSSDEETKDSMMRSNSASGRPGCSYIQQYSHIPETS--AFQRYAHQTPLSPSKAT 65
P L+ T D M +SNS G+ C + P S A + P SP A
Sbjct: 61 PEFFLAGKQPCTND-MAKSNSV-GQDSCQDSEGDMIFPAESSCALPQEGSAGPGSPGSAP 118
Query: 66 TLEKEH-NSEQYGRDFT---TYDGITARGRRQCASVPCKRDDAPRLAAE 110
K +SE+ T +DG++ + R SVPC R R AE
Sbjct: 119 PSRKRSWSSEEESNQATGTSRWDGVSKKAPRHHLSVPCTRPREARQEAE 167
>AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein
protein.
Length = 1042
Score = 30.7 bits (66), Expect = 9.2
Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Query: 8 PNLQLSSSDEETKDSMMRSNSASGRPGCSYIQQYSHIPETS--AFQRYAHQTPLSPSKAT 65
P L+ T D M +SNS G+ C + P S A + P SP A
Sbjct: 61 PEFFLAGKQPCTND-MAKSNSV-GQDSCQDSEGDMIFPAESSCALPQEGSAGPGSPGSAP 118
Query: 66 TLEKEH-NSEQYGRDFT---TYDGITARGRRQCASVPCKRDDAPRLAAE 110
K +SE+ T +DG++ + R SVPC R R AE
Sbjct: 119 PSRKRSWSSEEESNQATGTSRWDGVSKKAPRHHLSVPCTRPREARQEAE 167
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.131 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,186,698
Number of Sequences: 224733
Number of extensions: 2501342
Number of successful extensions: 5813
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 5799
Number of HSP's gapped (non-prelim): 33
length of query: 390
length of database: 73,234,838
effective HSP length: 91
effective length of query: 299
effective length of database: 52,784,135
effective search space: 15782456365
effective search space used: 15782456365
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)
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