GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005402-TA|BGIBMGA005402-PA|IPR001650|Helicase,
C-terminal
         (111 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   4.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   7.9  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 52  LPAHLVIIKNTQQYVNGAYQEYSI 75
           L +H +   NT+Q+V   YQ  ++
Sbjct: 268 LSSHNLNYVNTEQFVKSQYQANNV 291


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor
          protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)

Query: 25 RMYIESAFRNRD 36
          RMYIE  F  RD
Sbjct: 85 RMYIEIKFTTRD 96


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.136    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,821
Number of Sequences: 429
Number of extensions: 999
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 111
length of database: 140,377
effective HSP length: 50
effective length of query: 61
effective length of database: 118,927
effective search space:  7254547
effective search space used:  7254547
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.1 bits)
S2: 39 (19.8 bits)