Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005386-TA|BGIBMGA005386-PA|undefined
(246 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 1.1
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 4.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 4.5
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 6.0
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 22 6.0
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 6.0
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 6.0
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 6.0
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 7.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 7.9
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 24.2 bits (50), Expect = 1.1
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 176 KSTADEITTMRNDTKILDKEMENRHTIVNSKDTVLPSCKTNSEGDSKEGLLSTPCLKNLP 235
K A + T+++ + + E+ ++ S +L SC +N G S +STP K +
Sbjct: 885 KRPASQATSVKAEPGSIMAMSESSKKVL-SPGELLSSCVSNDGGCSSLVDVSTPVNKKVY 943
Query: 236 RMQGYLFKRTS 246
+ Y+ +S
Sbjct: 944 KQNDYIVDESS 954
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 66 HHCYHYYRDIKGVKESKHH 84
HHC Y+ I+G++ H
Sbjct: 474 HHCPEIYKAIEGIRFIADH 492
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 4.5
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 63 QSHHHCYHYYRDIKGVKESKHH 84
Q HHH +++ ++ HH
Sbjct: 139 QRHHHLQNHHHHLQSTAVQDHH 160
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 74 DIKGVKESKHHFDKISNDL 92
DI+G+KE HF ++ D+
Sbjct: 50 DIEGIKEKLDHFLEMGVDM 68
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.8 bits (44), Expect = 6.0
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 63 QSHHHCYHY 71
QSHHH +H+
Sbjct: 71 QSHHHLHHH 79
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 6.0
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 192 LDKEMENRHTIVNSKDTVLPSCKTNSEGDSKEGLLSTPCLKNLPRMQGY 240
L +++ N T ++S + + S + N K L P LP GY
Sbjct: 360 LKQDILNLRTDISSSSSSISSSEENDFWQPKPTLEDAPQNSLLPNFVGY 408
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.8 bits (44), Expect = 6.0
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 167 LTEDLEPF--LKSTADEITTMRNDTKILDKEMENRHTI 202
L D E F L S+ DEI T D+ + ENR TI
Sbjct: 315 LVIDRETFNQLISSLDEIRTRYKDSSSSVEGWENRATI 352
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 74 DIKGVKESKHHFDKISNDL 92
DI+G+KE HF ++ D+
Sbjct: 50 DIEGIKEKLDHFLEMGVDM 68
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 94 LALIRNSQVSRHKSADVEEVVNLLLATR 121
+ L+R + +D E + NLLL+TR
Sbjct: 46 VTLVRAEDIFEDGKSDKEILDNLLLSTR 73
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 94 LALIRNSQVSRHKSADVEEVVNLLLATR 121
+ L+R + +D E + NLLL+TR
Sbjct: 46 VTLVRAEDIFEDGKSDKEILDNLLLSTR 73
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 94 LALIRNSQVSRHKSADVEEVVNLLLATR 121
+ L+R + +D E + NLLL+TR
Sbjct: 46 VTLVRAEDIFEDGKSDKEILDNLLLSTR 73
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 94 LALIRNSQVSRHKSADVEEVVNLLLATR 121
+ L+R + +D E + NLLL+TR
Sbjct: 46 VTLVRAEDIFEDGKSDKEILDNLLLSTR 73
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.134 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,087
Number of Sequences: 429
Number of extensions: 2793
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 12
length of query: 246
length of database: 140,377
effective HSP length: 56
effective length of query: 190
effective length of database: 116,353
effective search space: 22107070
effective search space used: 22107070
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)
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