GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005385-TA|BGIBMGA005385-PA|undefined
         (124 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   1.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   2.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   4.1  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 71   GLSQWKVWFTVQTECRYPYHYTSVHAIEGGD 101
            G  QWK+W     E    +HY+ V  +   D
Sbjct: 1016 GNMQWKIWPMKGEEKSRLFHYSVVPFVSNHD 1046


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query: 99  GGDPVRRLDFC 109
           GGD + R DFC
Sbjct: 569 GGDSLERFDFC 579


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)

Query: 80  TVQTECRYPYHYTSV 94
           T+ T+C YP +Y+ +
Sbjct: 630 TLSTKCPYPSYYSYI 644


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.140    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,863
Number of Sequences: 429
Number of extensions: 1505
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 124
length of database: 140,377
effective HSP length: 51
effective length of query: 73
effective length of database: 118,498
effective search space:  8650354
effective search space used:  8650354
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.1 bits)
S2: 39 (19.8 bits)