Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005384-TA|BGIBMGA005384-PA|IPR007918|Mitochondrial
distribution and morphology family 35/apoptosis
(82 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC119.18 |||mitochondrial distribution and morphology protein ... 69 1e-13
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 25 1.00
SPAC22G7.07c |||mRNA |Schizosaccharomyces pombe|chr 1|||Manual 25 1.3
SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr... 24 3.0
SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2 |Schizosacch... 24 3.0
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 23 4.0
SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyc... 23 5.3
SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|c... 23 7.0
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 23 7.0
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 23 7.0
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 22 9.3
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 22 9.3
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 22 9.3
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 22 9.3
SPBC14F5.11c |mug186||sorting nexin Snx41|Schizosaccharomyces po... 22 9.3
SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces pombe... 22 9.3
>SPBC119.18 |||mitochondrial distribution and morphology protein
Mdm35 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 69
Score = 68.5 bits (160), Expect = 1e-13
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 2 NSIGEECTDLKKKYDDCFNTWFSERFLKGDQDDSVCAGIFKIYQECVKNAMKQQSID 58
+S+ EECT KKKYD CFN W++ +FLKGD + C +F Y+ C+ A+K + ID
Sbjct: 3 SSVSEECTPAKKKYDACFNDWYANKFLKGDLHNRDCDELFAEYKSCLLKALKTKKID 59
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 25.4 bits (53), Expect = 1.00
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 42 KIYQECVKNAMKQQSIDFKEIDKDILGTENEYKTPPNANSS 82
K Y + N K+ ++ +EI K+ L T N + P AN+S
Sbjct: 162 KAYMSHISNLRKKSRLNLQEIQKNSLHTGN--TSHPYANAS 200
>SPAC22G7.07c |||mRNA |Schizosaccharomyces pombe|chr 1|||Manual
Length = 413
Score = 25.0 bits (52), Expect = 1.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 24 SERFLKGDQDDSVCAGIFKIYQECVKN 50
S F+ D+V G+ +IYQ+CV+N
Sbjct: 142 SYSFITIKSKDTVELGLEEIYQQCVQN 168
>SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 178
Score = 23.8 bits (49), Expect = 3.0
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 24 SERFLKGDQDDSVCAGIFKIYQECVKNAMKQQSIDFKEIDKDI 66
+E+ L Q+ + ++K+ ++ K A K+ S+D KE+ K +
Sbjct: 121 AEQLLALTQNQEI--SLYKLLKKYNKQASKEDSLDSKEVLKHL 161
>SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 23.8 bits (49), Expect = 3.0
Identities = 7/31 (22%), Positives = 18/31 (58%)
Query: 34 DSVCAGIFKIYQECVKNAMKQQSIDFKEIDK 64
+S+C+G F C + ++ Q++ + ++K
Sbjct: 918 ESLCSGTFSCLLACCNSVLRTQNLTSESLNK 948
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 23.4 bits (48), Expect = 4.0
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 10 DLKKKYDDCFNTWFSERFLK 29
+L+K D FN W + +FL+
Sbjct: 319 ELEKTVDSLFNIWSNAQFLR 338
>SPCC4B3.15 |mid1|dmf1|medial ring protein
Mid1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 23.0 bits (47), Expect = 5.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 45 QECVKNAMKQQSIDFKEIDKDILGTENEYKTP 76
QE K S+D K ++ L + N KTP
Sbjct: 4 QEFSYREAKDVSLDSKGLENSFLSSPNREKTP 35
>SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 22.6 bits (46), Expect = 7.0
Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Query: 4 IGEECTDLKKKYDDCFNT-WF 23
I EE +KKKY FN+ W+
Sbjct: 758 IREELKKVKKKYGSSFNSRWY 778
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 22.6 bits (46), Expect = 7.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 3 SIGEECTDLKKKYDDCFNTWFSERFLKG 30
SI EE D K K D C + F + + G
Sbjct: 242 SICEEQNDFKAKTDYCLQSSFDNQDITG 269
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 22.6 bits (46), Expect = 7.0
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 57 IDFKEIDKDILGTENEYKTPPNAN 80
I KE+++ +GT + TP ++N
Sbjct: 68 ISLKELERQKVGTPDSNSTPKSSN 91
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 22.2 bits (45), Expect = 9.3
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 34 DSVCAGIFKIYQECVKNAMKQQSIDFKEIDKDIL 67
+S+C + E + A+K+ ++ F EI+ IL
Sbjct: 337 ESLCKDMEDAAVEPINKALKKANLTFSEINSIIL 370
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 22.2 bits (45), Expect = 9.3
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 57 IDFKE--IDKDILGTENEYKTPPNANS 81
I+FKE I D+ G EN++ T +A++
Sbjct: 96 INFKEKNIQHDLDGVENDFATVQSASN 122
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 22.2 bits (45), Expect = 9.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 46 ECVKNAMKQQSIDFKEIDKDILGTENEYKTP 76
E A +QQ + ++I+K +L +NE+ P
Sbjct: 338 EVTMGAAEQQRWEAQQINKALLFDQNEWLPP 368
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 22.2 bits (45), Expect = 9.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 50 NAMKQQSIDFKEIDKDILGTENE 72
NA K ++ID E K+ L TE+E
Sbjct: 234 NAEKGETIDESEDSKNTLVTEDE 256
>SPBC14F5.11c |mug186||sorting nexin Snx41|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 586
Score = 22.2 bits (45), Expect = 9.3
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 45 QECVKNAMKQQSIDFKEIDKD 65
+EC+++ QS DF+ + +D
Sbjct: 449 EECLRDLRHNQSQDFETVSQD 469
>SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 22.2 bits (45), Expect = 9.3
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 10 DLKKKYDDCFNTWFSERFL 28
D+KKKY D + F E+ +
Sbjct: 301 DVKKKYIDALGSSFDEKIM 319
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.133 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,590
Number of Sequences: 5004
Number of extensions: 16266
Number of successful extensions: 35
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 16
length of query: 82
length of database: 2,362,478
effective HSP length: 60
effective length of query: 22
effective length of database: 2,062,238
effective search space: 45369236
effective search space used: 45369236
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 45 (22.2 bits)
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