Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005381-TA|BGIBMGA005381-PA|IPR004088|KH, type 1,
IPR004087|KH
(332 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005225-1|AAH05225.1| 362|Homo sapiens Unknown (protein for IM... 390 e-108
BC026107-1|AAH26107.1| 381|Homo sapiens KRR1, small subunit (SS... 386 e-107
BC033887-1|AAH33887.1| 381|Homo sapiens KRR1, small subunit (SS... 385 e-106
BC016778-1|AAH16778.1| 381|Homo sapiens KRR1, small subunit (SS... 385 e-106
U55766-1|AAB00557.1| 288|Homo sapiens Rev interacting protein R... 338 2e-92
EF010919-1|ABJ97679.1| 324|Homo sapiens HRB2 variant B protein. 288 2e-77
BC000048-1|AAH00048.1| 304|Homo sapiens DnaJ (Hsp40) homolog, s... 33 1.1
AK001496-1|BAA91724.1| 304|Homo sapiens protein ( Homo sapiens ... 33 1.1
BC039263-1|AAH39263.1| 609|Homo sapiens GRID1 protein protein. 32 2.5
AL683834-1|CAI39587.1| 791|Homo sapiens glutamate receptor, ion... 32 2.5
AL596135-1|CAI39475.1| 791|Homo sapiens glutamate receptor, ion... 32 2.5
AB033046-1|BAA86534.1| 791|Homo sapiens KIAA1220 protein protein. 32 2.5
M31523-1|AAA61146.1| 654|Homo sapiens TCF3 protein. 31 4.3
M31222-1|AAA52331.1| 648|Homo sapiens TCF3 protein. 31 4.3
M24405-1|AAA56830.1| 440|Homo sapiens kappa-E2-binding factor p... 31 4.3
DQ323998-1|ABC88600.1| 333|Homo sapiens QKI protein. 31 4.3
BC019917-1|AAH19917.1| 341|Homo sapiens quaking homolog, KH dom... 31 4.3
BC012222-1|AAH12222.1| 293|Homo sapiens QKI protein protein. 31 4.3
BC011665-1|AAH11665.1| 591|Homo sapiens TCF3 protein protein. 31 4.3
AY780788-1|AAV98358.1| 313|Homo sapiens quaking isoform protein. 31 4.3
AL356119-3|CAI23024.1| 325|Homo sapiens quaking homolog, KH dom... 31 4.3
AL356119-2|CAI23023.1| 319|Homo sapiens quaking homolog, KH dom... 31 4.3
AL356119-1|CAI23022.1| 341|Homo sapiens quaking homolog, KH dom... 31 4.3
AL031781-3|CAI21653.1| 325|Homo sapiens quaking homolog, KH dom... 31 4.3
AL031781-2|CAI21652.1| 319|Homo sapiens quaking homolog, KH dom... 31 4.3
AL031781-1|CAI21651.1| 341|Homo sapiens quaking homolog, KH dom... 31 4.3
AK027309-1|BAB55032.1| 323|Homo sapiens protein ( Homo sapiens ... 31 4.3
AF142422-1|AAF63417.1| 341|Homo sapiens QUAKING isoform 3 protein. 31 4.3
AF142421-1|AAF63416.1| 337|Homo sapiens QUAKING isoform 5 protein. 31 4.3
AF142420-1|AAF63415.1| 315|Homo sapiens QUAKING isoform 4 protein. 31 4.3
AF142419-1|AAF63414.1| 363|Homo sapiens QUAKING isoform 6 protein. 31 4.3
AF142418-1|AAF63413.1| 347|Homo sapiens QUAKING isoform 2 protein. 31 4.3
AF142417-1|AAF63412.1| 321|Homo sapiens QUAKING isoform 1 protein. 31 4.3
AC005321-2|AAC27373.1| 606|Homo sapiens TFE2_HUMAN protein. 31 4.3
AB067808-1|BAB69681.1| 325|Homo sapiens RNA binding protein HQK... 31 4.3
AB067801-1|BAB69499.1| 319|Homo sapiens RNA binding protein HQK... 31 4.3
AB067800-1|BAB69498.1| 325|Homo sapiens RNA binding protein HQK... 31 4.3
AB067799-1|BAB69497.1| 319|Homo sapiens RNA binding protein HQK... 31 4.3
AB067798-1|BAB69496.1| 341|Homo sapiens RNA binding protein HQK... 31 4.3
BC094702-1|AAH94702.1| 627|Homo sapiens MAP1A protein protein. 31 7.5
BC068565-1|AAH68565.1| 644|Homo sapiens SULF1 protein protein. 31 7.5
BC052620-1|AAH52620.1| 411|Homo sapiens CHAF1A protein protein. 31 7.5
BC016029-1|AAH16029.1| 639|Homo sapiens CTTNBP2 N-terminal like... 31 7.5
AY101175-1|AAM76860.1| 871|Homo sapiens extracellular sulfatase... 31 7.5
AL354760-2|CAI22308.1| 639|Homo sapiens novel protein protein. 31 7.5
AK074873-1|BAC11258.1| 540|Homo sapiens protein ( Homo sapiens ... 31 7.5
AF545571-1|AAO33315.1| 871|Homo sapiens sulfatase SULF1 precurs... 31 7.5
AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related p... 31 7.5
AF095910-1|AAF03480.1| 378|Homo sapiens microtubule-associated ... 31 7.5
AB037854-1|BAA92671.1| 652|Homo sapiens KIAA1433 protein protein. 31 7.5
AB029000-1|BAA83029.1| 818|Homo sapiens KIAA1077 protein protein. 31 7.5
BC110585-1|AAI10586.1| 975|Homo sapiens ring finger protein 20 ... 30 9.9
BC110584-1|AAI10585.1| 975|Homo sapiens ring finger protein 20 ... 30 9.9
BC063115-1|AAH63115.1| 695|Homo sapiens RNF20 protein protein. 30 9.9
AL591377-3|CAH69963.1| 977|Homo sapiens ring finger protein 20 ... 30 9.9
AL353621-9|CAI14618.1| 977|Homo sapiens ring finger protein 20 ... 30 9.9
AK022532-1|BAB14081.1| 975|Homo sapiens protein ( Homo sapiens ... 30 9.9
AK022300-1|BAB14005.1| 746|Homo sapiens protein ( Homo sapiens ... 30 9.9
AK000697-1|BAA91326.1| 670|Homo sapiens protein ( Homo sapiens ... 30 9.9
AK000389-1|BAA91134.1| 682|Homo sapiens protein ( Homo sapiens ... 30 9.9
AF265230-1|AAK58539.1| 975|Homo sapiens RING finger protein 20 ... 30 9.9
>BC005225-1|AAH05225.1| 362|Homo sapiens Unknown (protein for
IMAGE:3685682) protein.
Length = 362
Score = 390 bits (961), Expect = e-108
Identities = 197/331 (59%), Positives = 239/331 (72%), Gaps = 5/331 (1%)
Query: 5 ETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIV 64
E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+EHH+
Sbjct: 32 ELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVN 89
Query: 65 AELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINS 124
A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R+L D++ CDIIKI S
Sbjct: 90 ATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGS 149
Query: 125 FVRKKETFLKRRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDT 184
VR KE F+KRRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR++V DT
Sbjct: 150 LVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDT 209
Query: 185 MKNIHPMYNIKSLMIKRELMKDPRLKNESWDRFLPTFKSKNVXXXXX-XXXXXXXXXXXX 243
MKNIHP+YNIKSLMIKREL KD L+++SW+RFLP FK KNV
Sbjct: 210 MKNIHPIYNIKSLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPF 269
Query: 244 XXXXXESKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEK-I 302
ES+IDKELA+GEYFLK +QKK + + KQA+A R E+R K FIPP+EK I
Sbjct: 270 PPPQPESQIDKELASGEYFLKANQKKRQKMEAIKAKQAEAISKRQEERNKAFIPPKEKPI 329
Query: 303 EKP-XXXXXXXXXXXQLKAKMKKFTKRKSLK 332
KP +K K+KK K+K K
Sbjct: 330 VKPKEASTETKIDVASIKEKVKKGKKKKKKK 360
>BC026107-1|AAH26107.1| 381|Homo sapiens KRR1, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 381
Score = 386 bits (950), Expect = e-107
Identities = 194/328 (59%), Positives = 236/328 (71%), Gaps = 5/328 (1%)
Query: 5 ETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIV 64
E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+EHH+
Sbjct: 32 ELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVN 89
Query: 65 AELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINS 124
A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R+L D++ CDIIKI S
Sbjct: 90 ATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGS 149
Query: 125 FVRKKETFLKRRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDT 184
VR KE F+KRRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR++ DT
Sbjct: 150 LVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVALDT 209
Query: 185 MKNIHPMYNIKSLMIKRELMKDPRLKNESWDRFLPTFKSKNVXXXXX-XXXXXXXXXXXX 243
MKNIHP+YNIKSLMIKREL KD L+++SW+RFLP FK KNV
Sbjct: 210 MKNIHPIYNIKSLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPF 269
Query: 244 XXXXXESKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEK-I 302
ES+IDKELA+GEYFLK +QKK + + KQA+A R E+R K FIPP+EK I
Sbjct: 270 PPPQPESQIDKELASGEYFLKANQKKRQKMEAIKAKQAEAISKRQEERNKAFIPPKEKPI 329
Query: 303 EKP-XXXXXXXXXXXQLKAKMKKFTKRK 329
KP +K K+KK +K
Sbjct: 330 VKPKEASTETKIDVASIKEKVKKAKNKK 357
>BC033887-1|AAH33887.1| 381|Homo sapiens KRR1, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 381
Score = 385 bits (948), Expect = e-106
Identities = 194/328 (59%), Positives = 236/328 (71%), Gaps = 5/328 (1%)
Query: 5 ETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIV 64
E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+EHH+
Sbjct: 32 ELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVN 89
Query: 65 AELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINS 124
A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R+L D++ CDIIKI S
Sbjct: 90 ATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGS 149
Query: 125 FVRKKETFLKRRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDT 184
VR KE F+KRRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR++V DT
Sbjct: 150 LVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDT 209
Query: 185 MKNIHPMYNIKSLMIKRELMKDPRLKNESWDRFLPTFKSKNVXXXXXXXXXXXXXXXXXX 244
MKNIHP+YNIKSLMIKREL KD L+++SW+RFLP FK KNV
Sbjct: 210 MKNIHPIYNIKSLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPF 269
Query: 245 XXXXE-SKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEK-I 302
S+IDKELA+GEYFLK +QKK + + KQA+A R E+R K FIPP+EK I
Sbjct: 270 PPPQPGSQIDKELASGEYFLKANQKKRQKMEAIKAKQAEAISKRQEERNKAFIPPKEKPI 329
Query: 303 EKP-XXXXXXXXXXXQLKAKMKKFTKRK 329
KP +K K+KK +K
Sbjct: 330 VKPKEASTEAKIDVASIKEKVKKAKNKK 357
>BC016778-1|AAH16778.1| 381|Homo sapiens KRR1, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 381
Score = 385 bits (947), Expect = e-106
Identities = 194/328 (59%), Positives = 236/328 (71%), Gaps = 5/328 (1%)
Query: 5 ETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIV 64
E +V + W K P F+ +DNP GLLEES FATLFPKYR YLKECWPLVQK L+EHH+
Sbjct: 32 ELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYRGAYLKECWPLVQKALNEHHVN 89
Query: 65 AELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINS 124
A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R+L D++ CDIIKI S
Sbjct: 90 ATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGS 149
Query: 125 FVRKKETFLKRRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDT 184
VR KE F+KRRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR++V DT
Sbjct: 150 LVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDT 209
Query: 185 MKNIHPMYNIKSLMIKRELMKDPRLKNESWDRFLPTFKSKNVXXXXX-XXXXXXXXXXXX 243
MKNIHP+YNIKSLMIKREL KD L+++SW+RFLP FK KNV
Sbjct: 210 MKNIHPIYNIKSLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPF 269
Query: 244 XXXXXESKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEK-I 302
ES+IDKELA+GEYFLK +QKK + + KQA+A R E+R K FIPP+EK I
Sbjct: 270 PPPQPESQIDKELASGEYFLKANQKKRQKMEAIKAKQAEAISKRQEERNKAFIPPKEKPI 329
Query: 303 EKP-XXXXXXXXXXXQLKAKMKKFTKRK 329
KP +K K+KK +K
Sbjct: 330 VKPKEASTETKIDVASIKEKVKKAKNKK 357
>U55766-1|AAB00557.1| 288|Homo sapiens Rev interacting protein
Rip-1 protein.
Length = 288
Score = 338 bits (831), Expect = 2e-92
Identities = 156/222 (70%), Positives = 187/222 (84%), Gaps = 2/222 (0%)
Query: 5 ETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIV 64
E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+EHH+
Sbjct: 32 ELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVN 89
Query: 65 AELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINS 124
A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R+L D++ CDIIKI S
Sbjct: 90 ATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGS 149
Query: 125 FVRKKETFLKRRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDT 184
VR KE F+KRRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR++V DT
Sbjct: 150 LVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDT 209
Query: 185 MKNIHPMYNIKSLMIKRELMKDPRLKNESWDRFLPTFKSKNV 226
MKNIHP+YNIKSLMIKREL KD L+++SW+RFLP FK KNV
Sbjct: 210 MKNIHPIYNIKSLMIKRELAKDSELRSQSWERFLPQFKHKNV 251
>EF010919-1|ABJ97679.1| 324|Homo sapiens HRB2 variant B protein.
Length = 324
Score = 288 bits (706), Expect = 2e-77
Identities = 132/191 (69%), Positives = 160/191 (83%), Gaps = 2/191 (1%)
Query: 5 ETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIV 64
E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+EHH+
Sbjct: 32 ELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVN 89
Query: 65 AELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINS 124
A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R+L D++ CDIIKI S
Sbjct: 90 ATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGS 149
Query: 125 FVRKKETFLKRRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDT 184
VR KE F+KR QRL+GP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR++V DT
Sbjct: 150 LVRNKERFVKRGQRLVGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDT 209
Query: 185 MKNIHPMYNIK 195
MKNIHP+YNIK
Sbjct: 210 MKNIHPIYNIK 220
Score = 66.1 bits (154), Expect = 2e-10
Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 251 KIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEK-IEKP-XXX 308
KIDKELA+GEYFLK +QKK + + KQA+A R E+R K FIPP+EK I KP
Sbjct: 220 KIDKELASGEYFLKANQKKRQKMEAIKAKQAEAISKRQEERNKAFIPPKEKPIVKPKEAS 279
Query: 309 XXXXXXXXQLKAKMKKFTKRK 329
+K K+KK +K
Sbjct: 280 TEAKIDVASIKEKVKKAKNKK 300
>BC000048-1|AAH00048.1| 304|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 17 protein.
Length = 304
Score = 33.5 bits (73), Expect = 1.1
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 251 KIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEK 304
K K+ A L E +KK K+ E +E+QAQA+ +E+ + +++IE+
Sbjct: 77 KAKKQAAERTQKLDEKRKKVKLDLEARERQAQAQESEEEEESRSTRTLEQEIER 130
>AK001496-1|BAA91724.1| 304|Homo sapiens protein ( Homo sapiens
cDNA FLJ10634 fis, clone NT2RP2005654, weakly similar to
CYSTEINE STRING PROTEIN. ).
Length = 304
Score = 33.5 bits (73), Expect = 1.1
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 251 KIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEK 304
K K+ A L E +KK K+ E +E+QAQA+ +E+ + +++IE+
Sbjct: 77 KAKKQAAERTQKLDEKRKKVKLDLEARERQAQAQESEEEEESRSTRTLEQEIER 130
>BC039263-1|AAH39263.1| 609|Homo sapiens GRID1 protein protein.
Length = 609
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 102 VPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGP--QGVTLKSIELLTECYVL 159
V FE + G D+ K+ ++ +K ++R +G QG+TLK + +L E +V+
Sbjct: 392 VQFEILGTTYSETFGKDMRKLATWDSEKGLNGSLQERPMGSRLQGLTLKVVTVLEEPFVM 451
Query: 160 VQGNTVSAVGPYKG 173
V N + YKG
Sbjct: 452 VAENILGQPKRYKG 465
>AL683834-1|CAI39587.1| 791|Homo sapiens glutamate receptor,
ionotropic, delta 1 protein.
Length = 791
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 102 VPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGP--QGVTLKSIELLTECYVL 159
V FE + G D+ K+ ++ +K ++R +G QG+TLK + +L E +V+
Sbjct: 174 VQFEILGTTYSETFGKDMRKLATWDSEKGLNGSLQERPMGSRLQGLTLKVVTVLEEPFVM 233
Query: 160 VQGNTVSAVGPYKG 173
V N + YKG
Sbjct: 234 VAENILGQPKRYKG 247
>AL596135-1|CAI39475.1| 791|Homo sapiens glutamate receptor,
ionotropic, delta 1 protein.
Length = 791
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 102 VPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGP--QGVTLKSIELLTECYVL 159
V FE + G D+ K+ ++ +K ++R +G QG+TLK + +L E +V+
Sbjct: 174 VQFEILGTTYSETFGKDMRKLATWDSEKGLNGSLQERPMGSRLQGLTLKVVTVLEEPFVM 233
Query: 160 VQGNTVSAVGPYKG 173
V N + YKG
Sbjct: 234 VAENILGQPKRYKG 247
>AB033046-1|BAA86534.1| 791|Homo sapiens KIAA1220 protein protein.
Length = 791
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 102 VPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGP--QGVTLKSIELLTECYVL 159
V FE + G D+ K+ ++ +K ++R +G QG+TLK + +L E +V+
Sbjct: 174 VQFEILGTTYSETFGKDMRKLATWDSEKGLNGSLQERPMGSRLQGLTLKVVTVLEEPFVM 233
Query: 160 VQGNTVSAVGPYKG 173
V N + YKG
Sbjct: 234 VAENILGQPKRYKG 247
>M31523-1|AAA61146.1| 654|Homo sapiens TCF3 protein.
Length = 654
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 265 EDQKKAKIHHEKQEKQAQAKRVRD--EQRQKDFIPPQEKIEK 304
E+ A H E+++K+ +A R R ++ + D +PP++K E+
Sbjct: 505 EENTSAADHSEEEKKELKAPRARTSPDEDEDDLLPPEQKAER 546
>M31222-1|AAA52331.1| 648|Homo sapiens TCF3 protein.
Length = 648
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 265 EDQKKAKIHHEKQEKQAQAKRVRD--EQRQKDFIPPQEKIEK 304
E+ A H E+++K+ +A R R ++ + D +PP++K E+
Sbjct: 499 EENTSAADHSEEEKKELKAPRARTSPDEDEDDLLPPEQKAER 540
>M24405-1|AAA56830.1| 440|Homo sapiens kappa-E2-binding factor
protein.
Length = 440
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 265 EDQKKAKIHHEKQEKQAQAKRVRD--EQRQKDFIPPQEKIEK 304
E+ A H E+++K+ +A R R ++ + D +PP++K E+
Sbjct: 291 EENTSAADHSEEEKKELKAPRARTSPDEDEDDLLPPEQKAER 332
>DQ323998-1|ABC88600.1| 333|Homo sapiens QKI protein.
Length = 333
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>BC019917-1|AAH19917.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>BC012222-1|AAH12222.1| 293|Homo sapiens QKI protein protein.
Length = 293
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 53 RILGPRGLTAKQLEAETGCKIMVRG 77
>BC011665-1|AAH11665.1| 591|Homo sapiens TCF3 protein protein.
Length = 591
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 265 EDQKKAKIHHEKQEKQAQAKRVRD--EQRQKDFIPPQEKIEK 304
E+ A H E+++K+ +A R R ++ + D +PP++K E+
Sbjct: 442 EENTSAADHSEEEKKELKAPRARTSPDEDEDDLLPPEQKAER 483
>AY780788-1|AAV98358.1| 313|Homo sapiens quaking isoform protein.
Length = 313
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 97 RILGPRGLTAKQLEAETGCKIMVRG 121
>AL356119-3|CAI23024.1| 325|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 325
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AL356119-2|CAI23023.1| 319|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 319
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AL356119-1|CAI23022.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AL031781-3|CAI21653.1| 325|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 325
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AL031781-2|CAI21652.1| 319|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 319
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AL031781-1|CAI21651.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AK027309-1|BAB55032.1| 323|Homo sapiens protein ( Homo sapiens
cDNA FLJ14403 fis, clone HEMBA1003805, highly similar to
Mus musculus KH domain RNA binding protein QKI-5A mRNA.
).
Length = 323
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 83 RILGPRGLTAKQLEAETGCKIMVRG 107
>AF142422-1|AAF63417.1| 341|Homo sapiens QUAKING isoform 3 protein.
Length = 341
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 123 RILGPRGLTAKQLEAETGCKIMVRG 147
>AF142421-1|AAF63416.1| 337|Homo sapiens QUAKING isoform 5 protein.
Length = 337
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 97 RILGPRGLTAKQLEAETGCKIMVRG 121
>AF142420-1|AAF63415.1| 315|Homo sapiens QUAKING isoform 4 protein.
Length = 315
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 97 RILGPRGLTAKQLEAETGCKIMVRG 121
>AF142419-1|AAF63414.1| 363|Homo sapiens QUAKING isoform 6 protein.
Length = 363
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 123 RILGPRGLTAKQLEAETGCKIMVRG 147
>AF142418-1|AAF63413.1| 347|Homo sapiens QUAKING isoform 2 protein.
Length = 347
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 123 RILGPRGLTAKQLEAETGCKIMVRG 147
>AF142417-1|AAF63412.1| 321|Homo sapiens QUAKING isoform 1 protein.
Length = 321
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 97 RILGPRGLTAKQLEAETGCKIMVRG 121
>AC005321-2|AAC27373.1| 606|Homo sapiens TFE2_HUMAN protein.
Length = 606
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 265 EDQKKAKIHHEKQEKQAQAKRVRD--EQRQKDFIPPQEKIEK 304
E+ A H E+++K+ +A R R ++ + D +PP++K E+
Sbjct: 457 EENTSAADHSEEEKKELKAPRARTSPDEDEDDLLPPEQKAER 498
>AB067808-1|BAB69681.1| 325|Homo sapiens RNA binding protein HQK
protein.
Length = 325
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AB067801-1|BAB69499.1| 319|Homo sapiens RNA binding protein HQK-7B
protein.
Length = 319
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AB067800-1|BAB69498.1| 325|Homo sapiens RNA binding protein HQK-7
protein.
Length = 325
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AB067799-1|BAB69497.1| 319|Homo sapiens RNA binding protein HQK-6
protein.
Length = 319
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AB067798-1|BAB69496.1| 341|Homo sapiens RNA binding protein HQK-5
protein.
Length = 341
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 138 RLIGPQGVTLKSIELLTECYVLVQG 162
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>BC094702-1|AAH94702.1| 627|Homo sapiens MAP1A protein protein.
Length = 627
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/56 (28%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 250 SKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEKP 305
SK++++ + +K+++K+ K ++E++ AK+ E+++KD P +KI KP
Sbjct: 410 SKLEEKKDKEKKEIKKERKELKKDEGRKEEKKDAKK---EEKRKDTKPELKKISKP 462
>BC068565-1|AAH68565.1| 644|Homo sapiens SULF1 protein protein.
Length = 644
Score = 30.7 bits (66), Expect = 7.5
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 96 KLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQR 138
KL S PF++A++ +D ++ + K N+ RKKE KRRQR
Sbjct: 453 KLKSHLHPFKEAAQEVDSKL--QLFKENNRRRKKERKEKRRQR 493
>BC052620-1|AAH52620.1| 411|Homo sapiens CHAF1A protein protein.
Length = 411
Score = 30.7 bits (66), Expect = 7.5
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 263 LKEDQKKAK--IHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEKPXXXXXXXXXXXQ-LK 319
LKE+ K+AK +K+E++ ++ R E+R+KD +EK EK + L+
Sbjct: 342 LKEEAKRAKEEAKKKKEEEKELKEKERREKREKD---EKEKAEKQRLKEERRKERQEALE 398
Query: 320 AKMKKFTKRKSLK 332
AK+++ K+K K
Sbjct: 399 AKLEEKRKKKKKK 411
>BC016029-1|AAH16029.1| 639|Homo sapiens CTTNBP2 N-terminal like
protein.
Length = 639
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/64 (26%), Positives = 38/64 (59%), Gaps = 9/64 (14%)
Query: 249 ESKIDKELATGEYFLKEDQKKAKIHHE-------KQEKQAQAKRVRDEQRQKDFIPPQEK 301
E++++K+L+ E+ ++ +Q +AK++ E K+E ++ K V+D + P E+
Sbjct: 232 EAQVEKQLS--EFDIEREQLRAKLNREENRTKTLKEEMESLKKIVKDLEASHQHSSPNEQ 289
Query: 302 IEKP 305
++KP
Sbjct: 290 LKKP 293
>AY101175-1|AAM76860.1| 871|Homo sapiens extracellular sulfatase
SULF-1 protein.
Length = 871
Score = 30.7 bits (66), Expect = 7.5
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 96 KLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQR 138
KL S PF++A++ +D ++ + K N+ RKKE KRRQR
Sbjct: 694 KLKSHLHPFKEAAQEVDSKL--QLFKENNRRRKKERKEKRRQR 734
>AL354760-2|CAI22308.1| 639|Homo sapiens novel protein protein.
Length = 639
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/64 (26%), Positives = 38/64 (59%), Gaps = 9/64 (14%)
Query: 249 ESKIDKELATGEYFLKEDQKKAKIHHE-------KQEKQAQAKRVRDEQRQKDFIPPQEK 301
E++++K+L+ E+ ++ +Q +AK++ E K+E ++ K V+D + P E+
Sbjct: 232 EAQVEKQLS--EFDIEREQLRAKLNREENRTKTLKEEMESLKKIVKDLEASHQHSSPNEQ 289
Query: 302 IEKP 305
++KP
Sbjct: 290 LKKP 293
>AK074873-1|BAC11258.1| 540|Homo sapiens protein ( Homo sapiens
cDNA FLJ90392 fis, clone NT2RP2005541, weakly similar to
N-ACETYLGLUCOSAMINE-6-SULFATASE PRECURSOR (EC 3.1.6.14).
).
Length = 540
Score = 30.7 bits (66), Expect = 7.5
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 96 KLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQR 138
KL S PF++A++ +D ++ + K N+ RKKE KRRQR
Sbjct: 363 KLKSHLHPFKEAAQEVDSKL--QLFKENNRRRKKERREKRRQR 403
>AF545571-1|AAO33315.1| 871|Homo sapiens sulfatase SULF1 precursor
protein.
Length = 871
Score = 30.7 bits (66), Expect = 7.5
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 96 KLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQR 138
KL S PF++A++ +D ++ + K N+ RKKE KRRQR
Sbjct: 694 KLKSHLHPFKEAAQEVDSKL--QLFKENNRRRKKERKEKRRQR 734
>AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related
protein P80 protein.
Length = 1825
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/56 (28%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 250 SKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEKP 305
SK++++ + +K+++K+ K ++E++ AK+ E+++KD P +KI KP
Sbjct: 410 SKLEEKKDKEKKEIKKERKELKKDEGRKEEKKDAKK---EEKRKDTKPELKKISKP 462
>AF095910-1|AAF03480.1| 378|Homo sapiens microtubule-associated
protein 1A like protein protein.
Length = 378
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/56 (28%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 250 SKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEKP 305
SK++++ + +K+++K+ K ++E++ AK+ E+++KD P +KI KP
Sbjct: 119 SKLEEKKDKEKKEIKKERKELKKDEGRKEEKKDAKK---EEKRKDTKPELKKISKP 171
>AB037854-1|BAA92671.1| 652|Homo sapiens KIAA1433 protein protein.
Length = 652
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/64 (26%), Positives = 38/64 (59%), Gaps = 9/64 (14%)
Query: 249 ESKIDKELATGEYFLKEDQKKAKIHHE-------KQEKQAQAKRVRDEQRQKDFIPPQEK 301
E++++K+L+ E+ ++ +Q +AK++ E K+E ++ K V+D + P E+
Sbjct: 245 EAQVEKQLS--EFDIEREQLRAKLNREENRTKTLKEEMESLKKIVKDLEASHQHSSPNEQ 302
Query: 302 IEKP 305
++KP
Sbjct: 303 LKKP 306
>AB029000-1|BAA83029.1| 818|Homo sapiens KIAA1077 protein protein.
Length = 818
Score = 30.7 bits (66), Expect = 7.5
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 96 KLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQR 138
KL S PF++A++ +D ++ + K N+ RKKE KRRQR
Sbjct: 641 KLKSHLHPFKEAAQEVDSKL--QLFKENNRRRKKERKEKRRQR 681
>BC110585-1|AAI10586.1| 975|Homo sapiens ring finger protein 20
protein.
Length = 975
Score = 30.3 bits (65), Expect = 9.9
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 249 ESKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEKPXXX 308
+SK D+E E KE +++ + EK E++ + +++++ ++++D +EK +
Sbjct: 561 KSKRDEEERERERREKEREREREREKEK-EREREKQKLKESEKERDSAKDKEKGKHDDGR 619
Query: 309 XXXXXXXXQLKAKMKK 324
QLK ++KK
Sbjct: 620 KKEAEIIKQLKIELKK 635
>BC110584-1|AAI10585.1| 975|Homo sapiens ring finger protein 20
protein.
Length = 975
Score = 30.3 bits (65), Expect = 9.9
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 249 ESKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEKPXXX 308
+SK D+E E KE +++ + EK E++ + +++++ ++++D +EK +
Sbjct: 561 KSKRDEEERERERREKEREREREREKEK-EREREKQKLKESEKERDSAKDKEKGKHDDGR 619
Query: 309 XXXXXXXXQLKAKMKK 324
QLK ++KK
Sbjct: 620 KKEAEIIKQLKIELKK 635
>BC063115-1|AAH63115.1| 695|Homo sapiens RNF20 protein protein.
Length = 695
Score = 30.3 bits (65), Expect = 9.9
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 249 ESKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEKPXXX 308
+SK D+E E KE +++ + EK E++ + +++++ ++++D +EK +
Sbjct: 561 KSKRDEEERERERREKEREREREREKEK-EREREKQKLKESEKERDSAKDKEKGKHDDGR 619
Query: 309 XXXXXXXXQLKAKMKK 324
QLK ++KK
Sbjct: 620 KKEAEIIKQLKIELKK 635
>AL591377-3|CAH69963.1| 977|Homo sapiens ring finger protein 20
protein.
Length = 977
Score = 30.3 bits (65), Expect = 9.9
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 249 ESKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEKPXXX 308
+SK D+E E KE +++ + EK E++ + +++++ ++++D +EK +
Sbjct: 563 KSKRDEEERERERREKEREREREREKEK-EREREKQKLKESEKERDSAKDKEKGKHDDGR 621
Query: 309 XXXXXXXXQLKAKMKK 324
QLK ++KK
Sbjct: 622 KKEAEIIKQLKIELKK 637
>AL353621-9|CAI14618.1| 977|Homo sapiens ring finger protein 20
protein.
Length = 977
Score = 30.3 bits (65), Expect = 9.9
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 249 ESKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEKPXXX 308
+SK D+E E KE +++ + EK E++ + +++++ ++++D +EK +
Sbjct: 563 KSKRDEEERERERREKEREREREREKEK-EREREKQKLKESEKERDSAKDKEKGKHDDGR 621
Query: 309 XXXXXXXXQLKAKMKK 324
QLK ++KK
Sbjct: 622 KKEAEIIKQLKIELKK 637
>AK022532-1|BAB14081.1| 975|Homo sapiens protein ( Homo sapiens
cDNA FLJ12470 fis, clone NT2RM1000885, weakly similar to
HYPOTHETICAL 97.1 KD PROTEIN R05D3.4 IN CHROMOSOME III.
).
Length = 975
Score = 30.3 bits (65), Expect = 9.9
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 249 ESKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEKPXXX 308
+SK D+E E KE +++ + EK E++ + +++++ ++++D +EK +
Sbjct: 561 KSKRDEEERERERREKEREREREREKEK-EREREKQKLKESEKERDSAKDKEKGKHDDGR 619
Query: 309 XXXXXXXXQLKAKMKK 324
QLK ++KK
Sbjct: 620 KKEAEIIKQLKIELKK 635
>AK022300-1|BAB14005.1| 746|Homo sapiens protein ( Homo sapiens
cDNA FLJ12238 fis, clone MAMMA1001260, weakly similar to
HYPOTHETICAL 97.1 KD PROTEIN R05D3.4 IN CHROMOSOME III.
).
Length = 746
Score = 30.3 bits (65), Expect = 9.9
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 249 ESKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEKPXXX 308
+SK D+E E KE +++ + EK E++ + +++++ ++++D +EK +
Sbjct: 332 KSKRDEEERERERREKEREREREREKEK-EREREKQKLKESEKERDSAKDKEKGKHDDGR 390
Query: 309 XXXXXXXXQLKAKMKK 324
QLK ++KK
Sbjct: 391 KKEAEIIKQLKIELKK 406
>AK000697-1|BAA91326.1| 670|Homo sapiens protein ( Homo sapiens
cDNA FLJ20690 fis, clone KAIA2769. ).
Length = 670
Score = 30.3 bits (65), Expect = 9.9
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 249 ESKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEKPXXX 308
+SK D+E E KE +++ + EK E++ + +++++ ++++D +EK +
Sbjct: 545 KSKRDEEERERERREKEREREREREKEK-EREREKQKLKESEKERDSAKDKEKGKHDDGR 603
Query: 309 XXXXXXXXQLKAKMKK 324
QLK ++KK
Sbjct: 604 KKEAEIIKQLKIELKK 619
>AK000389-1|BAA91134.1| 682|Homo sapiens protein ( Homo sapiens
cDNA FLJ20382 fis, clone KAIA2779. ).
Length = 682
Score = 30.3 bits (65), Expect = 9.9
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 249 ESKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEKPXXX 308
+SK D+E E KE +++ + EK E++ + +++++ ++++D +EK +
Sbjct: 545 KSKRDEEERERERREKEREREREREKEK-EREREKQKLKESEKERDSAKDKEKGKHDDGR 603
Query: 309 XXXXXXXXQLKAKMKK 324
QLK ++KK
Sbjct: 604 KKEAEIIKQLKIELKK 619
>AF265230-1|AAK58539.1| 975|Homo sapiens RING finger protein 20
protein.
Length = 975
Score = 30.3 bits (65), Expect = 9.9
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 249 ESKIDKELATGEYFLKEDQKKAKIHHEKQEKQAQAKRVRDEQRQKDFIPPQEKIEKPXXX 308
+SK D+E E KE +++ + EK E++ + +++++ ++++D +EK +
Sbjct: 561 KSKRDEEERERERREKEREREREREKEK-EREREKQKLKESEKERDSAKDKEKGKHDDGR 619
Query: 309 XXXXXXXXQLKAKMKK 324
QLK ++KK
Sbjct: 620 KKEAEIIKQLKIELKK 635
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.134 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,330,141
Number of Sequences: 224733
Number of extensions: 1452588
Number of successful extensions: 6600
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 6535
Number of HSP's gapped (non-prelim): 82
length of query: 332
length of database: 73,234,838
effective HSP length: 90
effective length of query: 242
effective length of database: 53,008,868
effective search space: 12828146056
effective search space used: 12828146056
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
- SilkBase 1999-2023 -