Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005377-TA|BGIBMGA005377-PA|IPR004595|TFIIH C1-like,
C-terminal, IPR007198|Ssl1-like
(352 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30094-1|CAA82910.1| 395|Homo sapiens basic transcripion factor... 187 6e-47
BC105980-1|AAI05981.1| 395|Homo sapiens DKFZP686P18101 protein ... 186 8e-47
BC065021-1|AAH65021.1| 395|Homo sapiens similar to TFIIH basal ... 186 8e-47
BC064557-1|AAH64557.1| 395|Homo sapiens LOC653866 protein protein. 186 8e-47
BT006773-1|AAP35419.1| 165|Homo sapiens general transcription f... 157 5e-38
BC005345-1|AAH05345.1| 165|Homo sapiens GTF2H2 protein protein. 157 5e-38
U21911-1|AAA64502.1| 130|Homo sapiens BTF2p44 protein. 153 1e-36
U80017-1|AAC52046.1| 143|Homo sapiens basic transcription facto... 118 4e-26
U21910-1|AAA64503.1| 69|Homo sapiens BTF2p44 protein. 45 3e-04
AB046779-1|BAB13385.1| 544|Homo sapiens KIAA1559 protein protein. 33 1.1
BC111054-1|AAI11055.1| 725|Homo sapiens FGD3 protein protein. 33 1.5
BC045552-1|AAH45552.1| 471|Homo sapiens FGD4 protein protein. 33 1.5
BC032571-1|AAH32571.1| 600|Homo sapiens RUN and FYVE domain con... 33 1.5
BC032429-1|AAH32429.1| 725|Homo sapiens FGD3 protein protein. 33 1.5
AY211386-1|AAP20645.1| 634|Homo sapiens FGD3 protein. 33 1.5
AL451065-1|CAI95107.1| 725|Homo sapiens FYVE, RhoGEF and PH dom... 33 1.5
AL389924-2|CAI41118.1| 725|Homo sapiens FYVE, RhoGEF and PH dom... 33 1.5
AK057294-1|BAB71413.1| 766|Homo sapiens protein ( Homo sapiens ... 33 1.5
AK025904-1|BAB15276.1| 310|Homo sapiens protein ( Homo sapiens ... 33 1.5
AK000004-1|BAA92229.1| 698|Homo sapiens FLJ00004 protein protein. 33 1.5
AF361055-1|AAK50771.1| 600|Homo sapiens RUFY1 protein. 33 1.5
AF312367-1|AAQ14554.1| 708|Homo sapiens La binding protein 1 pr... 33 1.5
AK128700-1|BAC87578.1| 615|Homo sapiens protein ( Homo sapiens ... 32 2.6
AK128282-1|BAC87366.1| 512|Homo sapiens protein ( Homo sapiens ... 32 2.6
BC032577-1|AAH32577.1| 532|Homo sapiens ZNF545 protein protein. 32 3.5
AK074942-1|BAC11308.1| 532|Homo sapiens protein ( Homo sapiens ... 32 3.5
AB075828-1|BAB85534.1| 487|Homo sapiens KIAA1948 protein protein. 32 3.5
X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein. 31 4.6
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote... 31 4.6
AK057495-1|BAB71510.1| 519|Homo sapiens protein ( Homo sapiens ... 31 4.6
DQ991252-1|ABJ55983.1| 521|Homo sapiens prosaposin-like protein... 31 6.1
BX664608-2|CAH70029.2| 1059|Homo sapiens zinc finger protein 658... 31 6.1
BX248098-4|CAI95420.1| 819|Homo sapiens zinc finger protein 658... 31 6.1
BC125053-1|AAI25054.1| 548|Homo sapiens PIP5K3 protein protein. 31 6.1
BC068579-1|AAH68579.1| 543|Homo sapiens Unknown (protein for IM... 31 6.1
BC045649-1|AAH45649.1| 836|Homo sapiens zinc finger protein 546... 31 6.1
BC030538-1|AAH30538.1| 563|Homo sapiens FLJ21986 protein protein. 31 6.1
AY457063-1|AAR19397.1| 2098|Homo sapiens FYVE domain-containing ... 31 6.1
AY358220-1|AAQ88587.1| 783|Homo sapiens VCRP9432 protein. 31 6.1
AL832638-1|CAD89953.1| 1026|Homo sapiens hypothetical protein pr... 31 6.1
AL832619-1|CAD89961.1| 1026|Homo sapiens hypothetical protein pr... 31 6.1
AL353770-5|CAM18525.1| 1059|Homo sapiens zinc finger protein 658... 31 6.1
AK097698-1|BAC05143.1| 241|Homo sapiens protein ( Homo sapiens ... 31 6.1
AK025639-1|BAB15198.1| 563|Homo sapiens protein ( Homo sapiens ... 31 6.1
AK022636-1|BAB14145.1| 569|Homo sapiens protein ( Homo sapiens ... 31 6.1
AB208969-1|BAD92206.1| 980|Homo sapiens KIAA0182 protein varian... 31 6.1
>Z30094-1|CAA82910.1| 395|Homo sapiens basic transcripion factor 2,
44 kD subunit protein.
Length = 395
Score = 187 bits (455), Expect = 6e-47
Identities = 86/204 (42%), Positives = 124/204 (60%), Gaps = 7/204 (3%)
Query: 135 QTLKTDGIRCSVIGLAAEVRICKKMCQDTNGDYGVVLDDCHYQSLLLEYTSPPPRARSLD 194
+TLK IR SVIGL+AEVR+C + ++T G Y V+LD+ HY+ LL + SPPP + S +
Sbjct: 187 KTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPPASSSSE 246
Query: 195 AGLVKMGFPHSTPLEEQADPGANVDPPITVCMCHLXXXXXXXXXXHLCPQCRSKYCSLPA 254
L++MGFP T + +D A P ++ + CPQCR+KYC LP
Sbjct: 247 CSLIRMGFPQHT-IASLSDQDAK--PSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPV 303
Query: 255 QCRTCGLTLASAPHLARSYHHLFPVEPYEE--LDNDGQAQYCFGCLRTFTDIDKKIHRCP 312
+C+ CGLTL SAPHLARSYHHLFP++ ++E L+ ++C+GC D+ ++ C
Sbjct: 304 ECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQGELK--DQHVYVCA 361
Query: 313 RCKEYYCWECEGAVTATLHVCPGC 336
C+ +C +C+ V +LH CPGC
Sbjct: 362 VCQNVFCVDCDVFVHDSLHCCPGC 385
Score = 157 bits (381), Expect = 5e-38
Identities = 70/131 (53%), Positives = 92/131 (70%)
Query: 3 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAEFXXXXXXXXXXXXXGPVRLGMMRHL 62
DE+ + RWE GYE+TWE +KEDE G +++ + + G VRLGMMRHL
Sbjct: 2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHL 61
Query: 63 LLAIDCSEAMSSQDLKPSRFLCTLKLLEKFVEEFFDQNPLSQLGLIAMKNKRAEKITDLS 122
+ +D S M QDLKP+R CTLKLLE FVEE+FDQNP+SQ+G+I K+KRAEK+T+LS
Sbjct: 62 YVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELS 121
Query: 123 GNVRKHIKAIQ 133
GN RKHI +++
Sbjct: 122 GNPRKHITSLK 132
>BC105980-1|AAI05981.1| 395|Homo sapiens DKFZP686P18101 protein
protein.
Length = 395
Score = 186 bits (454), Expect = 8e-47
Identities = 86/204 (42%), Positives = 124/204 (60%), Gaps = 7/204 (3%)
Query: 135 QTLKTDGIRCSVIGLAAEVRICKKMCQDTNGDYGVVLDDCHYQSLLLEYTSPPPRARSLD 194
+TLK IR SVIGL+AEVR+C + ++T G Y V+LD+ HY+ LL + SPPP + S +
Sbjct: 187 KTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHLSPPPASSSSE 246
Query: 195 AGLVKMGFPHSTPLEEQADPGANVDPPITVCMCHLXXXXXXXXXXHLCPQCRSKYCSLPA 254
L++MGFP T + +D A P ++ + CPQCR+KYC LP
Sbjct: 247 CSLIRMGFPQHT-IASLSDQDAK--PSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPV 303
Query: 255 QCRTCGLTLASAPHLARSYHHLFPVEPYEE--LDNDGQAQYCFGCLRTFTDIDKKIHRCP 312
+C+ CGLTL SAPHLARSYHHLFP++ ++E L+ ++C+GC D+ ++ C
Sbjct: 304 ECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQGELK--DQHVYVCA 361
Query: 313 RCKEYYCWECEGAVTATLHVCPGC 336
C+ +C +C+ V +LH CPGC
Sbjct: 362 VCQNVFCVDCDVFVHDSLHCCPGC 385
Score = 157 bits (381), Expect = 5e-38
Identities = 70/131 (53%), Positives = 92/131 (70%)
Query: 3 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAEFXXXXXXXXXXXXXGPVRLGMMRHL 62
DE+ + RWE GYE+TWE +KEDE G +++ + + G VRLGMMRHL
Sbjct: 2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHL 61
Query: 63 LLAIDCSEAMSSQDLKPSRFLCTLKLLEKFVEEFFDQNPLSQLGLIAMKNKRAEKITDLS 122
+ +D S M QDLKP+R CTLKLLE FVEE+FDQNP+SQ+G+I K+KRAEK+T+LS
Sbjct: 62 YVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELS 121
Query: 123 GNVRKHIKAIQ 133
GN RKHI +++
Sbjct: 122 GNPRKHITSLK 132
>BC065021-1|AAH65021.1| 395|Homo sapiens similar to TFIIH basal
transcription factor complex p44 subunit (Basic transcri
protein.
Length = 395
Score = 186 bits (454), Expect = 8e-47
Identities = 86/204 (42%), Positives = 124/204 (60%), Gaps = 7/204 (3%)
Query: 135 QTLKTDGIRCSVIGLAAEVRICKKMCQDTNGDYGVVLDDCHYQSLLLEYTSPPPRARSLD 194
+TLK IR SVIGL+AEVR+C + ++T G Y V+LD+ HY+ LL + SPPP + S +
Sbjct: 187 KTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHLSPPPASSSSE 246
Query: 195 AGLVKMGFPHSTPLEEQADPGANVDPPITVCMCHLXXXXXXXXXXHLCPQCRSKYCSLPA 254
L++MGFP T + +D A P ++ + CPQCR+KYC LP
Sbjct: 247 CSLIRMGFPQHT-IASLSDQDAK--PSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPV 303
Query: 255 QCRTCGLTLASAPHLARSYHHLFPVEPYEE--LDNDGQAQYCFGCLRTFTDIDKKIHRCP 312
+C+ CGLTL SAPHLARSYHHLFP++ ++E L+ ++C+GC D+ ++ C
Sbjct: 304 ECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQGELK--DQHVYVCA 361
Query: 313 RCKEYYCWECEGAVTATLHVCPGC 336
C+ +C +C+ V +LH CPGC
Sbjct: 362 VCQNVFCVDCDVFVHDSLHCCPGC 385
Score = 157 bits (381), Expect = 5e-38
Identities = 70/131 (53%), Positives = 92/131 (70%)
Query: 3 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAEFXXXXXXXXXXXXXGPVRLGMMRHL 62
DE+ + RWE GYE+TWE +KEDE G +++ + + G VRLGMMRHL
Sbjct: 2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHL 61
Query: 63 LLAIDCSEAMSSQDLKPSRFLCTLKLLEKFVEEFFDQNPLSQLGLIAMKNKRAEKITDLS 122
+ +D S M QDLKP+R CTLKLLE FVEE+FDQNP+SQ+G+I K+KRAEK+T+LS
Sbjct: 62 YVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELS 121
Query: 123 GNVRKHIKAIQ 133
GN RKHI +++
Sbjct: 122 GNPRKHITSLK 132
>BC064557-1|AAH64557.1| 395|Homo sapiens LOC653866 protein protein.
Length = 395
Score = 186 bits (454), Expect = 8e-47
Identities = 86/204 (42%), Positives = 124/204 (60%), Gaps = 7/204 (3%)
Query: 135 QTLKTDGIRCSVIGLAAEVRICKKMCQDTNGDYGVVLDDCHYQSLLLEYTSPPPRARSLD 194
+TLK IR SVIGL+AEVR+C + ++T G Y V+LD+ HY+ LL + SPPP + S +
Sbjct: 187 KTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHLSPPPASSSSE 246
Query: 195 AGLVKMGFPHSTPLEEQADPGANVDPPITVCMCHLXXXXXXXXXXHLCPQCRSKYCSLPA 254
L++MGFP T + +D A P ++ + CPQCR+KYC LP
Sbjct: 247 CSLIRMGFPQHT-IASLSDQDAK--PSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPV 303
Query: 255 QCRTCGLTLASAPHLARSYHHLFPVEPYEE--LDNDGQAQYCFGCLRTFTDIDKKIHRCP 312
+C+ CGLTL SAPHLARSYHHLFP++ ++E L+ ++C+GC D+ ++ C
Sbjct: 304 ECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQGELK--DQHVYVCA 361
Query: 313 RCKEYYCWECEGAVTATLHVCPGC 336
C+ +C +C+ V +LH CPGC
Sbjct: 362 VCQNVFCVDCDVFVHDSLHCCPGC 385
Score = 157 bits (381), Expect = 5e-38
Identities = 70/131 (53%), Positives = 92/131 (70%)
Query: 3 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAEFXXXXXXXXXXXXXGPVRLGMMRHL 62
DE+ + RWE GYE+TWE +KEDE G +++ + + G VRLGMMRHL
Sbjct: 2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHL 61
Query: 63 LLAIDCSEAMSSQDLKPSRFLCTLKLLEKFVEEFFDQNPLSQLGLIAMKNKRAEKITDLS 122
+ +D S M QDLKP+R CTLKLLE FVEE+FDQNP+SQ+G+I K+KRAEK+T+LS
Sbjct: 62 YVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELS 121
Query: 123 GNVRKHIKAIQ 133
GN RKHI +++
Sbjct: 122 GNPRKHITSLK 132
>BT006773-1|AAP35419.1| 165|Homo sapiens general transcription
factor IIH, polypeptide 2, 44kDa protein.
Length = 165
Score = 157 bits (381), Expect = 5e-38
Identities = 70/131 (53%), Positives = 92/131 (70%)
Query: 3 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAEFXXXXXXXXXXXXXGPVRLGMMRHL 62
DE+ + RWE GYE+TWE +KEDE G +++ + + G VRLGMMRHL
Sbjct: 2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHL 61
Query: 63 LLAIDCSEAMSSQDLKPSRFLCTLKLLEKFVEEFFDQNPLSQLGLIAMKNKRAEKITDLS 122
+ +D S M QDLKP+R CTLKLLE FVEE+FDQNP+SQ+G+I K+KRAEK+T+LS
Sbjct: 62 YVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELS 121
Query: 123 GNVRKHIKAIQ 133
GN RKHI +++
Sbjct: 122 GNPRKHITSLK 132
>BC005345-1|AAH05345.1| 165|Homo sapiens GTF2H2 protein protein.
Length = 165
Score = 157 bits (381), Expect = 5e-38
Identities = 70/131 (53%), Positives = 92/131 (70%)
Query: 3 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAEFXXXXXXXXXXXXXGPVRLGMMRHL 62
DE+ + RWE GYE+TWE +KEDE G +++ + + G VRLGMMRHL
Sbjct: 2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHL 61
Query: 63 LLAIDCSEAMSSQDLKPSRFLCTLKLLEKFVEEFFDQNPLSQLGLIAMKNKRAEKITDLS 122
+ +D S M QDLKP+R CTLKLLE FVEE+FDQNP+SQ+G+I K+KRAEK+T+LS
Sbjct: 62 YVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELS 121
Query: 123 GNVRKHIKAIQ 133
GN RKHI +++
Sbjct: 122 GNPRKHITSLK 132
>U21911-1|AAA64502.1| 130|Homo sapiens BTF2p44 protein.
Length = 130
Score = 153 bits (370), Expect = 1e-36
Identities = 69/129 (53%), Positives = 89/129 (68%)
Query: 3 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAEFXXXXXXXXXXXXXGPVRLGMMRHL 62
DE+ + RWE GYE+TWE +KEDE G +++ + + G VRLGMMRHL
Sbjct: 2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHL 61
Query: 63 LLAIDCSEAMSSQDLKPSRFLCTLKLLEKFVEEFFDQNPLSQLGLIAMKNKRAEKITDLS 122
+ +D S M QDLKP+R CTLKLLE FVEE+FDQNP+SQ+G+I K+KRAEK+T+LS
Sbjct: 62 YVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELS 121
Query: 123 GNVRKHIKA 131
GN RK I +
Sbjct: 122 GNPRKXISS 130
>U80017-1|AAC52046.1| 143|Homo sapiens basic transcription factor 2
p44 protein.
Length = 143
Score = 118 bits (283), Expect = 4e-26
Identities = 47/99 (47%), Positives = 67/99 (67%), Gaps = 4/99 (4%)
Query: 240 HLCPQCRSKYCSLPAQCRTCGLTLASAPHLARSYHHLFPVEPYEE--LDNDGQAQYCFGC 297
+ CPQCR+KYC LP +C+ CGLTL SAPHLARSYHHLFP++ ++E L+ ++C+GC
Sbjct: 37 YFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGC 96
Query: 298 LRTFTDIDKKIHRCPRCKEYYCWECEGAVTATLHVCPGC 336
D+ ++ C C+ +C +C+ V +LH CPGC
Sbjct: 97 QGELK--DQHVYVCAVCQNVFCVDCDVFVHDSLHCCPGC 133
>U21910-1|AAA64503.1| 69|Homo sapiens BTF2p44 protein.
Length = 69
Score = 45.2 bits (102), Expect = 3e-04
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 278 PVEPYEE--LDNDGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWECEGAVTATLHVCPG 335
P++ ++E L+ ++C+GC D + ++ C C+ +C +C+ V +LH CPG
Sbjct: 1 PLDAFQEIPLEEYNGERFCYGCQGELKD--QHVYVCAXCQNVFCVDCDVFVHDSLHCCPG 58
Query: 336 C 336
C
Sbjct: 59 C 59
>AB046779-1|BAB13385.1| 544|Homo sapiens KIAA1559 protein protein.
Length = 544
Score = 33.5 bits (73), Expect = 1.1
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 253 PAQCRTCGLTLASAPHLARSYHHLFPVEPYEELDNDGQAQYCFGCLRTFTDIDKKIHRCP 312
P +C+ CG T HL R + L E E G+A C LR + +KIH
Sbjct: 294 PYECKDCGKTFRQCTHLTR-HQRLHTAEKLYECKECGKAFVCGPDLR----VHQKIHFGE 348
Query: 313 RCKEYYCWEC 322
K Y C EC
Sbjct: 349 --KPYECKEC 356
>BC111054-1|AAI11055.1| 725|Homo sapiens FGD3 protein protein.
Length = 725
Score = 33.1 bits (72), Expect = 1.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWEC 322
D + Q C C TF I K+ H C C C +C
Sbjct: 532 DKEKQSCKSCGETFNSITKRRHHCKLCGAVICGKC 566
>BC045552-1|AAH45552.1| 471|Homo sapiens FGD4 protein protein.
Length = 471
Score = 33.1 bits (72), Expect = 1.5
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWEC 322
D + C C F + ++ H C C CW+C
Sbjct: 311 DNEVTMCMKCKEPFNALTRRRHHCRACGYVVCWKC 345
>BC032571-1|AAH32571.1| 600|Homo sapiens RUN and FYVE domain
containing 1 protein.
Length = 600
Score = 33.1 bits (72), Expect = 1.5
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWECEGAVTA------TLHVCPGCATRPH 341
D +A +C C + F+ I ++ H C C +C C A + VC C T
Sbjct: 534 DDEATHCRQCEKEFS-ISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSCHTL-- 590
Query: 342 LYQRLPSTTS 351
L QR ST S
Sbjct: 591 LLQRCSSTAS 600
>BC032429-1|AAH32429.1| 725|Homo sapiens FGD3 protein protein.
Length = 725
Score = 33.1 bits (72), Expect = 1.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWEC 322
D + Q C C TF I K+ H C C C +C
Sbjct: 532 DKEKQSCKSCGETFNSITKRRHHCKLCGAVICGKC 566
>AY211386-1|AAP20645.1| 634|Homo sapiens FGD3 protein.
Length = 634
Score = 33.1 bits (72), Expect = 1.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWEC 322
D + Q C C TF I K+ H C C C +C
Sbjct: 532 DKEKQSCKSCGETFNSITKRRHHCKLCGAVICGKC 566
>AL451065-1|CAI95107.1| 725|Homo sapiens FYVE, RhoGEF and PH domain
containing 3 protein.
Length = 725
Score = 33.1 bits (72), Expect = 1.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWEC 322
D + Q C C TF I K+ H C C C +C
Sbjct: 532 DKEKQSCKSCGETFNSITKRRHHCKLCGAVICGKC 566
>AL389924-2|CAI41118.1| 725|Homo sapiens FYVE, RhoGEF and PH domain
containing 3 protein.
Length = 725
Score = 33.1 bits (72), Expect = 1.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWEC 322
D + Q C C TF I K+ H C C C +C
Sbjct: 532 DKEKQSCKSCGETFNSITKRRHHCKLCGAVICGKC 566
>AK057294-1|BAB71413.1| 766|Homo sapiens protein ( Homo sapiens
cDNA FLJ32732 fis, clone TESTI2001141, highly similar to
Rattus norvegicus actin-filament binding protein Frabin
mRNA. ).
Length = 766
Score = 33.1 bits (72), Expect = 1.5
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWEC 322
D + C C F + ++ H C C CW+C
Sbjct: 559 DNEVTMCMKCKEPFNALTRRRHHCRACGYVVCWKC 593
>AK025904-1|BAB15276.1| 310|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22251 fis, clone HRC02686. ).
Length = 310
Score = 33.1 bits (72), Expect = 1.5
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWECEGAVTA------TLHVCPGCATRPH 341
D +A +C C + F+ I ++ H C C +C C A + VC C T
Sbjct: 244 DDEATHCRQCEKEFS-ISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSCHTL-- 300
Query: 342 LYQRLPSTTS 351
L QR ST S
Sbjct: 301 LLQRCSSTAS 310
>AK000004-1|BAA92229.1| 698|Homo sapiens FLJ00004 protein protein.
Length = 698
Score = 33.1 bits (72), Expect = 1.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWEC 322
D + Q C C TF I K+ H C C C +C
Sbjct: 596 DKEKQSCKSCGETFNSITKRRHHCKLCGAVICGKC 630
>AF361055-1|AAK50771.1| 600|Homo sapiens RUFY1 protein.
Length = 600
Score = 33.1 bits (72), Expect = 1.5
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWECEGAVTA------TLHVCPGCATRPH 341
D +A +C C + F+ I ++ H C C +C C A + VC C T
Sbjct: 534 DDEATHCRQCEKEFS-ISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSCHTL-- 590
Query: 342 LYQRLPSTTS 351
L QR ST S
Sbjct: 591 LLQRCSSTAS 600
>AF312367-1|AAQ14554.1| 708|Homo sapiens La binding protein 1
protein.
Length = 708
Score = 33.1 bits (72), Expect = 1.5
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWECEGAVTA------TLHVCPGCATRPH 341
D +A +C C + F+ I ++ H C C +C C A + VC C T
Sbjct: 642 DDEATHCRQCEKEFS-ISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSCHTL-- 698
Query: 342 LYQRLPSTTS 351
L QR ST S
Sbjct: 699 LLQRCSSTAS 708
>AK128700-1|BAC87578.1| 615|Homo sapiens protein ( Homo sapiens
cDNA FLJ46867 fis, clone UTERU3012293, weakly similar
to Homo sapiens zinc finger protein 14 (KOX 6) (ZNF14).
).
Length = 615
Score = 32.3 bits (70), Expect = 2.6
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 253 PAQCRTCGLTLASAPHLARSYHHLFPVEPYEELDNDGQAQYCFGC-LRTFTDIDKKIHRC 311
P +C+ CG T A L +PYE ++Y G + T I KK++ C
Sbjct: 195 PHECKQCGKTFRCASSLRIHGRTHTGEKPYECKQCGKVSRYWSGLQVHEVTHIGKKLYEC 254
Query: 312 PRC-KEYY 318
C K YY
Sbjct: 255 KECGKSYY 262
>AK128282-1|BAC87366.1| 512|Homo sapiens protein ( Homo sapiens
cDNA FLJ46419 fis, clone THYMU3012983, moderately
similar to Homo sapiens zinc finger protein 14 (KOX 6)
(ZNF14). ).
Length = 512
Score = 32.3 bits (70), Expect = 2.6
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 253 PAQCRTCGLTLASAPHLARSYHHLFPVEPYEELDNDGQAQYCFGC-LRTFTDIDKKIHRC 311
P +C+ CG T A L +PYE ++Y G + T I KK++ C
Sbjct: 92 PHECKQCGKTFRCASSLRIHGRTHTGEKPYECKQCGKVSRYWSGLQVHEVTHIGKKLYEC 151
Query: 312 PRC-KEYY 318
C K YY
Sbjct: 152 KECGKSYY 159
>BC032577-1|AAH32577.1| 532|Homo sapiens ZNF545 protein protein.
Length = 532
Score = 31.9 bits (69), Expect = 3.5
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 253 PAQCRTCGLTLASAPHLARSYHHLFPVEPYEELDNDGQAQYCFGCLRTF--TDIDKKIHR 310
P +C+ CG+ HL R + L E E G+A C LR I +K +
Sbjct: 197 PYECKECGMAFRQTAHLTR-HQRLHSGEKLYECKECGEAFICGADLRVHQKMHIGEKPYE 255
Query: 311 CPRC 314
C C
Sbjct: 256 CKEC 259
>AK074942-1|BAC11308.1| 532|Homo sapiens protein ( Homo sapiens
cDNA FLJ90461 fis, clone NT2RP3001976, moderately
similar to ZINC FINGER PROTEIN 84. ).
Length = 532
Score = 31.9 bits (69), Expect = 3.5
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 253 PAQCRTCGLTLASAPHLARSYHHLFPVEPYEELDNDGQAQYCFGCLRTF--TDIDKKIHR 310
P +C+ CG+ HL R + L E E G+A C LR I +K +
Sbjct: 197 PYECKECGMAFRQTAHLTR-HQRLHSGEKLYECKECGEAFICGADLRVHQKMHIGEKPYE 255
Query: 311 CPRC 314
C C
Sbjct: 256 CKEC 259
>AB075828-1|BAB85534.1| 487|Homo sapiens KIAA1948 protein protein.
Length = 487
Score = 31.9 bits (69), Expect = 3.5
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 253 PAQCRTCGLTLASAPHLARSYHHLFPVEPYEELDNDGQAQYCFGCLRTF--TDIDKKIHR 310
P +C+ CG+ HL R + L E E G+A C LR I +K +
Sbjct: 152 PYECKECGMAFRQTAHLTR-HQRLHSGEKLYECKECGEAFICGADLRVHQKMHIGEKPYE 210
Query: 311 CPRC 314
C C
Sbjct: 211 CKEC 214
>X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.
Length = 1411
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWEC--EGAVTAT----LHVCPGC 336
D + Q C C + F+ + + H C +C +C EC + A+T + + VC C
Sbjct: 1352 DNEVQNCMACGKGFS-VTVRRHHCRQCGNIFCAECSAKNALTPSSKKPVRVCDAC 1405
>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
protein.
Length = 1410
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWEC--EGAVTAT----LHVCPGC 336
D + Q C C + F+ + + H C +C +C EC + A+T + + VC C
Sbjct: 1351 DNEVQNCMACGKGFS-VTVRRHHCRQCGNIFCAECSAKNALTPSSKKPVRVCDAC 1404
>AK057495-1|BAB71510.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ32933 fis, clone TESTI2007466, moderately
similar to ZINC FINGER PROTEIN 91. ).
Length = 519
Score = 31.5 bits (68), Expect = 4.6
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 240 HLCPQCRSKYCSLPAQCRTCGLTLASAPHLARSYHHLFPVEPYEELDNDGQAQYCFGCLR 299
HL R P +C CG + + HLA +PY + + G+A C L
Sbjct: 308 HLTAHKRIHTGEKPYKCEECGKSFRKSSHLAAHKRIHTGEKPY-QCEECGKAYKCSSALT 366
Query: 300 TFTDI--DKKIHRCPRC-KEYYC 319
I +K ++C C K Y C
Sbjct: 367 RHRRIHTGEKPYKCEECGKAYIC 389
>DQ991252-1|ABJ55983.1| 521|Homo sapiens prosaposin-like protein 1
protein.
Length = 521
Score = 31.1 bits (67), Expect = 6.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 270 ARSYHHLFPVEPYEELDNDGQAQYCFGCLRTFT 302
AR+ H + + P E D + Q +C GC R T
Sbjct: 372 ARAVHDAYAIVPSPEWDAENQGSFCNGCKRLLT 404
>BX664608-2|CAH70029.2| 1059|Homo sapiens zinc finger protein 658
protein.
Length = 1059
Score = 31.1 bits (67), Expect = 6.1
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 15/87 (17%)
Query: 240 HLCPQCRSKYCSLPAQCRTCGLTLASAPHLARSYHHLFPVE-PYEELDNDGQAQYCFGCL 298
HLC R P +C CG T A L R++H + E PYE C C
Sbjct: 840 HLCAHQRIHTGEKPYECNECGKTFADNSAL-RAHHRIHTGEKPYE----------CNDCG 888
Query: 299 RTFTDIDK-KIHRCPRC--KEYYCWEC 322
+TF+ + H R K Y C EC
Sbjct: 889 KTFSKTSHLRAHLRTRSGEKPYECSEC 915
>BX248098-4|CAI95420.1| 819|Homo sapiens zinc finger protein 658B
protein.
Length = 819
Score = 31.1 bits (67), Expect = 6.1
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 15/87 (17%)
Query: 240 HLCPQCRSKYCSLPAQCRTCGLTLASAPHLARSYHHLFPVE-PYEELDNDGQAQYCFGCL 298
HLC R P +C CG T A L R++H + E PYE C C
Sbjct: 600 HLCAHQRIHTGEKPYECNECGKTFADNSAL-RAHHRIHTGEKPYE----------CNDCG 648
Query: 299 RTFTDIDK-KIHRCPRC--KEYYCWEC 322
+TF+ + H R K Y C EC
Sbjct: 649 KTFSKTSHLRAHLRTRSGEKPYECSEC 675
>BC125053-1|AAI25054.1| 548|Homo sapiens PIP5K3 protein protein.
Length = 548
Score = 31.1 bits (67), Expect = 6.1
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWEC 322
D Q + C+ C FT ++ H C C + +C C
Sbjct: 158 DSQCKECYDCSEKFTTFRRR-HHCRLCGQIFCSRC 191
>BC068579-1|AAH68579.1| 543|Homo sapiens Unknown (protein for
IMAGE:5260398) protein.
Length = 543
Score = 31.1 bits (67), Expect = 6.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 270 ARSYHHLFPVEPYEELDNDGQAQYCFGCLRTFT 302
AR+ H + + P E D + Q +C GC R T
Sbjct: 394 ARAVHDAYAIVPSPEWDAENQGSFCNGCKRLLT 426
>BC045649-1|AAH45649.1| 836|Homo sapiens zinc finger protein 546
protein.
Length = 836
Score = 31.1 bits (67), Expect = 6.1
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 252 LPAQCRTCGLTLASAPHLARSYHHLFPVEPYEELDNDGQAQYCFGCLRTFTDIDKKIHRC 311
+P +C+ CG T +S HL + Y +PY + G+A G L +IH C
Sbjct: 495 IPYECKECGKTFSSRYHLTQHYRIHTGEKPY-ICNECGKAFRLQGELTR----HHRIHTC 549
Query: 312 PRCKEYYCWEC 322
K Y C EC
Sbjct: 550 E--KPYECKEC 558
>BC030538-1|AAH30538.1| 563|Homo sapiens FLJ21986 protein protein.
Length = 563
Score = 31.1 bits (67), Expect = 6.1
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 312 PRCKEYYCWECEGAVTATLHV-CPGCATRPHLYQRL-PSTTS 351
P+ K+YYC VT T+ V P C + HLY++ PS S
Sbjct: 371 PKIKDYYCEVPFDVVTVTIGVETPKCLCKVHLYEQAGPSFAS 412
>AY457063-1|AAR19397.1| 2098|Homo sapiens FYVE domain-containing
phosphoinositide kinase protein.
Length = 2098
Score = 31.1 bits (67), Expect = 6.1
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 288 DGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWEC 322
D Q + C+ C FT ++ H C C + +C C
Sbjct: 158 DSQCKECYDCSEKFTTFRRR-HHCRLCGQIFCSRC 191
>AY358220-1|AAQ88587.1| 783|Homo sapiens VCRP9432 protein.
Length = 783
Score = 31.1 bits (67), Expect = 6.1
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 312 PRCKEYYCWECEGAVTATLHV-CPGCATRPHLYQRL-PSTTS 351
P+ K+YYC VT T+ V P C + HLY++ PS S
Sbjct: 591 PKIKDYYCEVPFDVVTVTIGVETPKCLCKVHLYEQAGPSFAS 632
>AL832638-1|CAD89953.1| 1026|Homo sapiens hypothetical protein
protein.
Length = 1026
Score = 31.1 bits (67), Expect = 6.1
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 312 PRCKEYYCWECEGAVTATLHV-CPGCATRPHLYQRL-PSTTS 351
P+ K+YYC VT T+ V P C + HLY++ PS S
Sbjct: 591 PKIKDYYCEVPFDVVTVTIGVETPKCLCKVHLYEQAGPSFAS 632
>AL832619-1|CAD89961.1| 1026|Homo sapiens hypothetical protein
protein.
Length = 1026
Score = 31.1 bits (67), Expect = 6.1
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 312 PRCKEYYCWECEGAVTATLHV-CPGCATRPHLYQRL-PSTTS 351
P+ K+YYC VT T+ V P C + HLY++ PS S
Sbjct: 591 PKIKDYYCEVPFDVVTVTIGVETPKCLCKVHLYEQAGPSFAS 632
>AL353770-5|CAM18525.1| 1059|Homo sapiens zinc finger protein 658
protein.
Length = 1059
Score = 31.1 bits (67), Expect = 6.1
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 15/87 (17%)
Query: 240 HLCPQCRSKYCSLPAQCRTCGLTLASAPHLARSYHHLFPVE-PYEELDNDGQAQYCFGCL 298
HLC R P +C CG T A L R++H + E PYE C C
Sbjct: 840 HLCAHQRIHTGEKPYECNECGKTFADNSAL-RAHHRIHTGEKPYE----------CNDCG 888
Query: 299 RTFTDIDK-KIHRCPRC--KEYYCWEC 322
+TF+ + H R K Y C EC
Sbjct: 889 KTFSKTSHLRAHLRTRSGEKPYECSEC 915
>AK097698-1|BAC05143.1| 241|Homo sapiens protein ( Homo sapiens
cDNA FLJ40379 fis, clone TESTI2035262, weakly similar to
PROACTIVATOR POLYPEPTIDE PRECURSOR. ).
Length = 241
Score = 31.1 bits (67), Expect = 6.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 270 ARSYHHLFPVEPYEELDNDGQAQYCFGCLRTFT 302
AR+ H + + P E D + Q +C GC R T
Sbjct: 104 ARAVHDAYAIVPSPEWDAENQGSFCNGCKRLLT 136
>AK025639-1|BAB15198.1| 563|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21986 fis, clone HEP06248. ).
Length = 563
Score = 31.1 bits (67), Expect = 6.1
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 312 PRCKEYYCWECEGAVTATLHV-CPGCATRPHLYQRL-PSTTS 351
P+ K+YYC VT T+ V P C + HLY++ PS S
Sbjct: 371 PKIKDYYCEVPFDVVTVTIGVETPKCLCKVHLYEQAGPSFAS 412
>AK022636-1|BAB14145.1| 569|Homo sapiens protein ( Homo sapiens
cDNA FLJ12574 fis, clone NT2RM4000996, moderately
similar to ZINC FINGER PROTEIN 91. ).
Length = 569
Score = 31.1 bits (67), Expect = 6.1
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 15/87 (17%)
Query: 240 HLCPQCRSKYCSLPAQCRTCGLTLASAPHLARSYHHLFPVE-PYEELDNDGQAQYCFGCL 298
HLC R P +C CG T A L R++H + E PYE C C
Sbjct: 350 HLCAHQRIHTGEKPYECNECGKTFADNSAL-RAHHRIHTGEKPYE----------CNDCG 398
Query: 299 RTFTDIDK-KIHRCPRC--KEYYCWEC 322
+TF+ + H R K Y C EC
Sbjct: 399 KTFSKTSHLRAHLRTRSGEKPYECSEC 425
>AB208969-1|BAD92206.1| 980|Homo sapiens KIAA0182 protein variant
protein.
Length = 980
Score = 31.1 bits (67), Expect = 6.1
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 281 PYEELDNDGQAQYCFGCLRTFTDIDKKIHRCPRCKEYYCWECEGAVTATLHVCPGC 336
P E L D + C L+ +D C RC +C + +GA ++ CP C
Sbjct: 20 PGERLREDARCPVCLDFLQEPVSVDCGHSFCLRCISEFCEKSDGA-QGGVYACPQC 74
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.137 0.440
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,145,563
Number of Sequences: 224733
Number of extensions: 2303974
Number of successful extensions: 6775
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 6700
Number of HSP's gapped (non-prelim): 88
length of query: 352
length of database: 73,234,838
effective HSP length: 91
effective length of query: 261
effective length of database: 52,784,135
effective search space: 13776659235
effective search space used: 13776659235
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 66 (30.7 bits)
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