Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005373-TA|BGIBMGA005373-PA|IPR001917|Aminotransferase,
class-II, IPR001611|Leucine-rich repeat, IPR004841|Amino acid
permease-associated region, IPR003591|Leucine-rich repeat, typical
subtype, IPR002293|Amino acid/polyamine transporter I
(1372 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 71 7e-14
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 27 0.80
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 26 1.8
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 26 2.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 26 2.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 26 2.4
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 26 2.4
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 26 2.4
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 25 3.2
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 25 3.2
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 25 3.2
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 25 3.2
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 25 3.2
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 25 3.2
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 25 3.2
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 25 4.2
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 25 5.6
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 25 5.6
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 25 5.6
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 25 5.6
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 25 5.6
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 5.6
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 24 7.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 24 7.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 7.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 24 7.4
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 24 7.4
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 24 9.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 24 9.8
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 24 9.8
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 70.9 bits (166), Expect = 7e-14
Identities = 94/348 (27%), Positives = 151/348 (43%), Gaps = 38/348 (10%)
Query: 63 LKFLDVSDNEVSAIP--AAISSLVNLQHLNISRNTLTSIP-ETMKALKYLLFLDLSVNPL 119
++ LD+S NE++ + + + L LQ L++ RN + I + + L L + S N L
Sbjct: 214 IRILDLSRNEITRLQENSPLLDLRQLQELHLQRNAIVEIAGDALTGLTVLRTFNASYNSL 273
Query: 120 EKLPDAI-TNLIALQELYLNDTYLEYLP-GNFGRLANLRILELRDNYLMILPKSLSRSTE 177
+ LP+ + + L+E++L L LP G F RL L +L L N L +
Sbjct: 274 DSLPEGLFASTRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAGNRLGSDRVDETTFLG 333
Query: 178 LLRLDIGQNDFQQFPEVIGRFLK----LKELWIDSNSLTCIPA-VIKPLENLIHLEATN- 231
L+RL + + + R K L+ L + +NS+ I + PL NL LE ++
Sbjct: 334 LIRLIVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSIDRIESNAFLPLYNLHTLELSDN 393
Query: 232 -----------------------NMIEELAP-EIGCCKQLQDLTLTLNHLTQLPDSIGQL 267
N I + P C L++L L+ N LT +PD++ L
Sbjct: 394 KLRTVGAQLFNGLFVLNRLTLSGNAIASIDPLAFRNCSDLKELDLSGNELTSVPDALRDL 453
Query: 268 SSLTTLKLDNNRLYSIPE-SIGQLSNLEELMLMCNYLDKIP-SSIGLLRKLQYLNLDDNM 325
+ L TL L NR+ + S L L L L+ N + + + L LQ LNL N
Sbjct: 454 ALLKTLDLGENRISNFYNGSFRNLDQLTGLRLIGNDIGNLSRGMLWDLPNLQILNLARNK 513
Query: 326 LRLIPPEIGSCN-KLSVLSLRGNKLNKIPPEIGHLTSLRVLYLVRNSL 372
++ + N +L + L GN L+ I + SL +L L N +
Sbjct: 514 VQHVERYAFERNMRLEAIRLDGNFLSDINGVFTSIASLLLLNLSENHI 561
Score = 57.2 bits (132), Expect = 9e-10
Identities = 101/377 (26%), Positives = 158/377 (41%), Gaps = 50/377 (13%)
Query: 47 SNRITELPRQLFM-CHGLKFLDVSDNEVSAIPA-AISSLVNLQHLNISRNTLTSIPET-- 102
++R EL F+ L L++ ++ V A+P ++ SL NLQ LN++ N L I +
Sbjct: 132 ASRFLELAPDSFLGLRELHTLEIVESNVQALPVNSLCSLDNLQTLNLTENRLRDINDIGL 191
Query: 103 ----------------MKALKYLLFLDLSVNPLEKLPD--AITNLIALQELYLNDTYLEY 144
+ LDLS N + +L + + +L LQEL+L +
Sbjct: 192 NRRDSDDGSDGNDGDESSCRADIRILDLSRNEITRLQENSPLLDLRQLQELHLQRNAIVE 251
Query: 145 LPGN-FGRLANLRILELRDNYLMILPKSLSRSTELLR-LDIGQNDFQQFPEVIGRFLKLK 202
+ G+ L LR N L LP+ L ST LR + + N + P+ G F +L+
Sbjct: 252 IAGDALTGLTVLRTFNASYNSLDSLPEGLFASTRDLREIHLAYNGLRDLPK--GIFTRLE 309
Query: 203 ELWIDSNSLTCIPAVIKPLENLIHLEATNNMIEELAPEIGCCKQLQDLTLTLNHLTQLPD 262
+L + NL ++ ++E +G + + L L+ N LT +
Sbjct: 310 QLLV---------------LNLAGNRLGSDRVDETT-FLGLIRLIV-LNLSYNMLTHIDA 352
Query: 263 SIGQ-LSSLTTLKLDNNRLYSIPESIG-QLSNLEELMLMCNYLDKIPSSI--GLLRKLQY 318
+ + L L L L NN + I + L NL L L N L + + + GL L
Sbjct: 353 RMFKDLFFLQILDLRNNSIDRIESNAFLPLYNLHTLELSDNKLRTVGAQLFNGLF-VLNR 411
Query: 319 LNLDDNMLRLIPP-EIGSCNKLSVLSLRGNKLNKIPPEIGHLTSLRVLYLVRNSLTCLPQ 377
L L N + I P +C+ L L L GN+L +P + L L+ L L N ++
Sbjct: 412 LTLSGNAIASIDPLAFRNCSDLKELDLSGNELTSVPDALRDLALLKTLDLGENRISNFYN 471
Query: 378 -SLLNCDNLVALWLSEN 393
S N D L L L N
Sbjct: 472 GSFRNLDQLTGLRLIGN 488
Score = 53.2 bits (122), Expect = 1e-08
Identities = 77/265 (29%), Positives = 122/265 (46%), Gaps = 16/265 (6%)
Query: 141 YLEYLPGNFGRLANLRILELRDNYLMILP-KSLSRSTELLRLDIGQNDFQQFPEVIGRFL 199
+LE P +F L L LE+ ++ + LP SL L L++ +N + + IG
Sbjct: 135 FLELAPDSFLGLRELHTLEIVESNVQALPVNSLCSLDNLQTLNLTENRLRDIND-IGLNR 193
Query: 200 KLKELWIDSN--SLTCIPAVIKPLENLIHLEATNNMIEELAPEIGCCKQLQDLTLTLNHL 257
+ + D N + A I+ L+ L E T ++E +P + +QLQ+L L N +
Sbjct: 194 RDSDDGSDGNDGDESSCRADIRILD-LSRNEITR--LQENSPLLD-LRQLQELHLQRNAI 249
Query: 258 TQLP-DSIGQLSSLTTLKLDNNRLYSIPESI-GQLSNLEELMLMCNYLDKIPSSI-GLLR 314
++ D++ L+ L T N L S+PE + +L E+ L N L +P I L
Sbjct: 250 VEIAGDALTGLTVLRTFNASYNSLDSLPEGLFASTRDLREIHLAYNGLRDLPKGIFTRLE 309
Query: 315 KLQYLNLDDNML---RLIPPEIGSCNKLSVLSLRGNKLNKIPPEI-GHLTSLRVLYLVRN 370
+L LNL N L R+ +L VL+L N L I + L L++L L N
Sbjct: 310 QLLVLNLAGNRLGSDRVDETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQILDLRNN 369
Query: 371 SLTCL-PQSLLNCDNLVALWLSENQ 394
S+ + + L NL L LS+N+
Sbjct: 370 SIDRIESNAFLPLYNLHTLELSDNK 394
Score = 25.0 bits (52), Expect = 4.2
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 132 LQELYLNDTYLEYLPGN-FGRLANLRILELRDN 163
++ LY+N + +E + F L NL+IL L DN
Sbjct: 820 MRVLYVNGSGIESIQNRTFNGLNNLQILHLEDN 852
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 27.5 bits (58), Expect = 0.80
Identities = 18/140 (12%), Positives = 56/140 (40%)
Query: 524 IEQESSKDHTDGINNEAMKTSVYDNLSSENTYDKPLDLAHEQGTTYKSVDHALYPENNET 583
IE+ ++ ++ ++++ +D + + Y + + ++ YK D +NE
Sbjct: 200 IEKSGNESKKYATSSNSLRSRTHDFQHTSSRYSRERSCSRDRNREYKEKDRRYEKLHNEK 259
Query: 584 SQSKYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNETNPYRMTN 643
+ + S + Y ++ + K + ++ S R+ + S + + E +
Sbjct: 260 EKLLEERTSRKRYSCSREREQKSYKNENSYRKYRETSKERSRDRTERERSREPKIISSLS 319
Query: 644 TPLVSDDGSYSQIHATSSQN 663
+ ++ +Y + ++ N
Sbjct: 320 NKTIHNNNNYKYNYNNNNYN 339
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 26.2 bits (55), Expect = 1.8
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 551 SENTYDKPLDLAHEQGTTYKSVDHALYPENNETSQSKYKNESSETY-DLTQTQYCKQHGD 609
+EN+Y K + + E+ K + + P+ + + YK + Y + Y +
Sbjct: 285 NENSYRKYRETSKERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNYNNNNYNNYNKK 344
Query: 610 KYSARQEIDRSHAPTPQNVYSGH 632
Y I+ P P +Y G+
Sbjct: 345 LYYKNYIINIEQIPVPVPIYCGN 367
Score = 23.8 bits (49), Expect = 9.8
Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 529 SKDHTDGINNEAMKTSVYDNLSSENTYDKPLDLAHEQGTTYKSVDHALYPENNETSQSKY 588
SK + N+ +T + + SS Y + + ++ YK D +NE +
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSH--YSRERSCSRDRNREYKEKDRRYEKLHNEKEKLLE 264
Query: 589 KNESSETYDLTQTQYCKQHGDKYSARQ 615
+ S + Y ++ + K + ++ S R+
Sbjct: 265 ERTSRKRYSRSREREQKSYKNENSYRK 291
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 25.8 bits (54), Expect = 2.4
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 584 SQSKYKNESSETYDLTQTQYCKQ--HGDKYSARQEID-RSHAPTPQNVYSGHTNETNPYR 640
S + +S T+D ++ K G+ Y+A+ I + +P N+Y T+ Y
Sbjct: 219 SDDSFHRLTSNTFDY-DPKFTKMTIDGESYTAQDGISGMALSPMTNNLYYSPVASTSLYY 277
Query: 641 MTNTPLVSDDGSYSQIHATSSQNMYE 666
+ + D + IH QN+ +
Sbjct: 278 VNTEQFRTSDYQQNDIHYEGVQNILD 303
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 25.8 bits (54), Expect = 2.4
Identities = 21/137 (15%), Positives = 53/137 (38%), Gaps = 2/137 (1%)
Query: 529 SKDHTDGINNEAMKTSVYDNLSSENTYDKPLDLAHEQGTTYKSVDHALYPENNETSQSKY 588
SK + N+ +T + + SS Y + + ++ YK D +NE +
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSR--YSRERSCSRDRNREYKEKDRRYEKLHNEKEKLLE 264
Query: 589 KNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNETNPYRMTNTPLVS 648
+ S + Y ++ + + ++ R+ +RS + + E + +
Sbjct: 265 ERTSRKRYSRSREREQNSYKNEREYRKYRERSKERSRDRTERERSREPKIISSLSNKTIH 324
Query: 649 DDGSYSQIHATSSQNMY 665
++ +Y+ + ++ N Y
Sbjct: 325 NNNNYNNNNYNNNYNNY 341
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 25.8 bits (54), Expect = 2.4
Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 4/150 (2%)
Query: 529 SKDHTDGINNEAMKTSVYDNLSSENTYDKPLDLAHEQGTTYKSVDHALYPENNETSQSKY 588
SK + N+ +T + + SS Y + + ++ Y+ D +NE +
Sbjct: 212 SKKYATSSNSLRNRTHGFQHTSSR--YSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLE 269
Query: 589 KNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNETNPYRMTNTPLVS 648
+ S + Y ++ + K + ++ S R+ + S + + E + +S
Sbjct: 270 ERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDKTERERSKERKIISSLSNNYIS 329
Query: 649 DDGSYSQIHATSSQNMYEI--YDAMPAPNP 676
+ +Y+ + + + Y I + +P P P
Sbjct: 330 NISNYNNNNNYNKKLYYNINYIEQIPVPVP 359
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 25.8 bits (54), Expect = 2.4
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 584 SQSKYKNESSETYDLTQTQYCKQ--HGDKYSARQEID-RSHAPTPQNVYSGHTNETNPYR 640
S + +S T+D ++ K G+ Y+A+ I + +P N+Y T+ Y
Sbjct: 219 SDDSFHRLTSNTFDY-DPKFTKMTIDGESYTAQDGISGMALSPMTNNLYYSPVASTSLYY 277
Query: 641 MTNTPLVSDDGSYSQIHATSSQNMYE 666
+ + D + IH QN+ +
Sbjct: 278 VNTEQFRTSDYQQNDIHYEGVQNILD 303
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 25.8 bits (54), Expect = 2.4
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 584 SQSKYKNESSETYDLTQTQYCKQ--HGDKYSARQEID-RSHAPTPQNVYSGHTNETNPYR 640
S + +S T+D ++ K G+ Y+A+ I + +P N+Y T+ Y
Sbjct: 219 SDDSFHRLTSNTFDY-DPKFTKMTIDGESYTAQDGISGMALSPMTNNLYYSPVASTSLYY 277
Query: 641 MTNTPLVSDDGSYSQIHATSSQNMYE 666
+ + D + IH QN+ +
Sbjct: 278 VNTEQFRTSDYQQNDIHYEGVQNILD 303
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 25.4 bits (53), Expect = 3.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 1039 AKYAVAVGAVCGMTTTLLGSMFSLPRCLYAMSAD 1072
A+ A+ + V MTT G SLPR Y + D
Sbjct: 272 ARVALGITTVLTMTTISTGVRSSLPRISYVKAID 305
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.4 bits (53), Expect = 3.2
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 577 YPENNETSQSKYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNET 636
Y + E Q YKNE+S +Y K ++ R E +RS P + S + N +
Sbjct: 39 YSRSREREQKSYKNENS------YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYS 92
Query: 637 N 637
N
Sbjct: 93 N 93
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.4 bits (53), Expect = 3.2
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 577 YPENNETSQSKYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNET 636
Y + E Q YKNE+S +Y K ++ R E +RS P + S + N +
Sbjct: 39 YSRSREREQKSYKNENS------YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYS 92
Query: 637 N 637
N
Sbjct: 93 N 93
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.4 bits (53), Expect = 3.2
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 577 YPENNETSQSKYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNET 636
Y + E Q YKNE+S +Y K ++ R E +RS P + S + N +
Sbjct: 39 YSRSREREQKSYKNENS------YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYS 92
Query: 637 N 637
N
Sbjct: 93 N 93
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.4 bits (53), Expect = 3.2
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 577 YPENNETSQSKYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNET 636
Y + E Q YKNE+S +Y K ++ R E +RS P + S + N +
Sbjct: 39 YSRSREREQKSYKNENS------YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYS 92
Query: 637 N 637
N
Sbjct: 93 N 93
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.4 bits (53), Expect = 3.2
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 577 YPENNETSQSKYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNET 636
Y + E Q YKNE+S +Y K ++ R E +RS P + S + N +
Sbjct: 39 YSRSREREQKSYKNENS------YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYS 92
Query: 637 N 637
N
Sbjct: 93 N 93
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.4 bits (53), Expect = 3.2
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 577 YPENNETSQSKYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNET 636
Y + E Q YKNE+S +Y K ++ R E +RS P + S + N +
Sbjct: 39 YSRSREREQKSYKNENS------YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYS 92
Query: 637 N 637
N
Sbjct: 93 N 93
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 25.0 bits (52), Expect = 4.2
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 577 YPENNETSQSKYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNET 636
Y + E Q+ YKNE +Y + ++ R+E +RS P + S N +
Sbjct: 261 YSRSREREQNSYKNERE------YRKYRETSKERSRDRRERERSKEPKIISSLSNSCNYS 314
Query: 637 NPYRMTN 643
N Y N
Sbjct: 315 NNYYNNN 321
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 5.6
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 577 YPENNETSQSKYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNET 636
Y + E Q+ YKNE +Y + ++ R E +RS P + S +T
Sbjct: 39 YSRSREREQNSYKNERE------YRKYRETSKERSRDRTERERSREPKIISSLSNNTIHN 92
Query: 637 NPYR 640
N Y+
Sbjct: 93 NNYK 96
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 5.6
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 577 YPENNETSQSKYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNET 636
Y + E Q+ YKNE +Y + ++ R E +RS P + S +T
Sbjct: 39 YSRSREREQNSYKNERE------YRKYRETSKERSRDRTERERSREPKIISSLSNNTIHN 92
Query: 637 NPYR 640
N Y+
Sbjct: 93 NNYK 96
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 5.6
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 577 YPENNETSQSKYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNET 636
Y + E Q+ YKNE +Y + ++ R E +RS P + S +T
Sbjct: 39 YSRSREREQNSYKNERE------YRKYRETSKERSRDRTERERSREPKIISSLSNNTIHN 92
Query: 637 NPYR 640
N Y+
Sbjct: 93 NNYK 96
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 5.6
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 577 YPENNETSQSKYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNET 636
Y + E Q+ YKNE +Y + ++ R E +RS P + S +T
Sbjct: 39 YSRSREREQNSYKNERE------YRKYRETSKERSRDRTERERSREPKIISSLSNNTIHN 92
Query: 637 NPYR 640
N Y+
Sbjct: 93 NNYK 96
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.6 bits (51), Expect = 5.6
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 577 YPENNETSQSKYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNET 636
Y + E Q YKNE+S +Y + ++ R E +RS P + S +T
Sbjct: 272 YSRSREREQRSYKNENS------YRKYRETSKERSRDRIERERSREPKIISSLSNNTIHN 325
Query: 637 NPY 639
N Y
Sbjct: 326 NNY 328
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 24.6 bits (51), Expect = 5.6
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 532 HTDGINNEAMKTSVYDNLSSENTYDKPLDLAHEQGTTYKSVDHALYPENNETSQSK 587
+++ I +E+ S Y + + EN + LD+ H+ T KS Y E ++ S+ K
Sbjct: 220 NSNSIKHES-DNSDYSHTTDENRHSSTLDIDHKMLTPIKSEPIDAY-EMHQISKKK 273
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.2 bits (50), Expect = 7.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 1039 AKYAVAVGAVCGMTTTLLGSMFSLPRCLYAMSAD 1072
A+ A+ V V MTT + + +LP+ Y S D
Sbjct: 251 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSID 284
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.2 bits (50), Expect = 7.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 1039 AKYAVAVGAVCGMTTTLLGSMFSLPRCLYAMSAD 1072
A+ A+ V V MTT + + +LP+ Y S D
Sbjct: 251 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSID 284
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.2 bits (50), Expect = 7.4
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 1074 LLFGFFSDISNKAQIPVANLAISGLSSAFI 1103
++F ++++ Q PVA++A+SG AF+
Sbjct: 332 VIFSVVGFMAHEQQKPVADVAVSGPGLAFL 361
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 24.2 bits (50), Expect = 7.4
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 527 ESSKDHTDGINNEAMKTSVYDNLSSENTYDKPLDLAHEQGTTYKSVDHALYPENNETSQS 586
E ++D N+ + + D + ++ T+ K + A EQ TT +S+D + TS
Sbjct: 528 EVTEDCNKSFNDLLTQVAELDQIYAD-THAKLVQAAFEQNTTDQSMDIDVCDNQTYTSLQ 586
Query: 587 KYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNET 636
E DL+ +++ D + + ++S P T ET
Sbjct: 587 MAMKNPIEFTDLSNE---RKYEDVCVLKTDTNQSCPSPPVTTKRDGTQET 633
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl subunit
protein.
Length = 365
Score = 24.2 bits (50), Expect = 7.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 1039 AKYAVAVGAVCGMTTTLLGSMFSLPRCLYAMSAD 1072
A+ A+ V V MTT + + +LP+ Y S D
Sbjct: 190 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSID 223
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 9.8
Identities = 18/91 (19%), Positives = 41/91 (45%)
Query: 584 SQSKYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNETNPYRMTN 643
S+S+ + ++S + +Y + ++ R E +RS P + S +T N Y+
Sbjct: 39 SRSREREQNSYKNEREYRKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNYKYNY 98
Query: 644 TPLVSDDGSYSQIHATSSQNMYEIYDAMPAP 674
++ +Y++ + N+ +I +P P
Sbjct: 99 NNNNYNNNNYNKKLYYNIINIEQIPVPVPVP 129
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 9.8
Identities = 18/91 (19%), Positives = 41/91 (45%)
Query: 584 SQSKYKNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNETNPYRMTN 643
S+S+ + ++S + +Y + ++ R E +RS P + S +T N Y+
Sbjct: 39 SRSREREQNSYKNEREYRKYRETSKERSRDRAERERSREPKIISSLSNNTIHNNNYKYNY 98
Query: 644 TPLVSDDGSYSQIHATSSQNMYEIYDAMPAP 674
++ +Y++ + N+ +I +P P
Sbjct: 99 NNNNYNNNNYNKKLYYNIINIEQIPVPVPVP 129
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.8 bits (49), Expect = 9.8
Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 2/107 (1%)
Query: 529 SKDHTDGINNEAMKTSVYDNLSSENTYDKPLDLAHEQGTTYKSVDHALYPENNETSQSKY 588
SK + N+ +T + + SS Y + + ++ YK D +NE +
Sbjct: 207 SKKYATSSNSLRNRTHGFQHTSSR--YSRERSCSRDRNREYKKKDRRYEKLHNEKKKLLE 264
Query: 589 KNESSETYDLTQTQYCKQHGDKYSARQEIDRSHAPTPQNVYSGHTNE 635
+ S + Y ++ + K + ++ S R+ + S + G + E
Sbjct: 265 ERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRRERGRSRE 311
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.135 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,490
Number of Sequences: 429
Number of extensions: 18032
Number of successful extensions: 90
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 67
Number of HSP's gapped (non-prelim): 38
length of query: 1372
length of database: 140,377
effective HSP length: 66
effective length of query: 1306
effective length of database: 112,063
effective search space: 146354278
effective search space used: 146354278
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)
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