GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005370-TA|BGIBMGA005370-PA|IPR000719|Protein kinase,
IPR011009|Protein kinase-like, IPR008984|SMAD/FHA,
IPR000253|Forkhead-associated, IPR008271|Serine/threonine protein
kinase, active site, IPR002290|Serine/threonine protein kinase
         (528 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...   127   2e-31
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...   116   6e-28
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    81   3e-17
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                78   2e-16
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    71   2e-14
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    71   2e-14
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    54   4e-09
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   6.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   8.3  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score =  127 bits (307), Expect = 2e-31
 Identities = 66/159 (41%), Positives = 93/159 (58%), Gaps = 5/159 (3%)

Query: 283 RQMVLAVKYLHSQGITHRDLKPENVLLEGDEDETLVKITDFGLS-KFVGEDSFMKTMCGT 341
           +Q++ +V + H  G+ HRDLKPEN+LL        VK+ DFGL+ +  GE        GT
Sbjct: 16  QQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGFAGT 75

Query: 342 PLYLAPEVLRANGQNTYGPEVDVWSLGVIFFVCLVGYLPFSHDYKEMSLKNQILNGQYKF 401
           P YL+PEVL+   +  YG  VD+W+ GVI ++ LVGY PF  D  +  L  QI  G Y +
Sbjct: 76  PGYLSPEVLK---KEPYGKPVDIWACGVILYILLVGYPPF-WDEDQHRLYAQIKTGSYDY 131

Query: 402 SQAHWKNISLQAKLLMKRMLTVQVSRRITLDQILNHAWM 440
               W  ++ +AK L+ +MLTV  S+RIT  + L H W+
Sbjct: 132 PSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI 170


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score =  116 bits (278), Expect = 6e-28
 Identities = 93/298 (31%), Positives = 145/298 (48%), Gaps = 18/298 (6%)

Query: 179 LGQGACGLVKLVYDKIKCTKH-AMKIIKKSRLTNGQINHINKPAKIMNEINIMKALRHPC 237
           LG G  G V+LV      ++  A+K +KK+     QI    +   IM+E  IM       
Sbjct: 373 LGVGGFGRVELVQIAGDSSRSFALKQMKKA-----QIVETRQQQHIMSEKRIMGEADCDF 427

Query: 238 IISIEEVFDSRDAVYIILELMEGGELFDRITKFSHLTEPLTRFIFRQMVLAVKYLHSQGI 297
           ++ + + F  R  +Y+++E   GGEL+  +    H  +  TRF    +V A  YLHS+ I
Sbjct: 428 VVKLFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNI 487

Query: 298 THRDLKPENVLLEGDEDETLVKITDFGLSKFVGEDSFMKTMCGTPLYLAPEVLRANGQNT 357
            +RDLKPEN+LL   + +  VK+ DFG +K +       T CGTP Y+APEV+   G + 
Sbjct: 488 IYRDLKPENLLL---DSQGYVKLVDFGFAKRLDHGRKTWTFCGTPEYVAPEVILNKGHDI 544

Query: 358 YGPEVDVWSLGVIFFVCLVGYLPFSHDYKEMSLKNQILNG--QYKFSQAHWKNISLQAKL 415
                D WSLGV+ F  L G  PF+     M   N IL G    +F ++  +N +   K 
Sbjct: 545 ---SADYWSLGVLMFELLTGTPPFTGG-DPMKTYNIILKGIDAIEFPRSITRNATALIKK 600

Query: 416 LMKRMLTVQVS-RRITLDQILNHAWMQDVD-TIIRVEKLLSHIRSKGMKQATNSTTGD 471
           L +     ++  ++  + +I  H W    +   +R   L   I  + ++ AT++T  D
Sbjct: 601 LCRDNPAERLGYQKGGISEIQKHKWFDGFNWEGLRARTLEPPIMPR-VQNATDTTNFD 657


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 80.6 bits (190), Expect = 3e-17
 Identities = 44/145 (30%), Positives = 79/145 (54%), Gaps = 8/145 (5%)

Query: 199 HAMKIIKKSRLTNGQINHINKPAKIMNEINIMKALRHPCIISIEEVFDSRDAVYIILELM 258
           +A+KI+KK  +    I   +    ++ +  +  + + P ++ +   F + D +Y ++E +
Sbjct: 12  YAIKILKKDII----IQDDDVECTMVEKRVLALSTKPPFLVQLHSCFQTMDRLYFVMEYV 67

Query: 259 EGGELFDRITKFSHLTEPLTRFIFRQMVLAVKYLHSQGITHRDLKPENVLLEGDEDETLV 318
            GG+L  +I +     EP+  F   ++ + + +LH +GI +RDLK +NVLL+ D     +
Sbjct: 68  NGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDGH---I 124

Query: 319 KITDFGLSK-FVGEDSFMKTMCGTP 342
           KI DFG+ K  +  D   KT CGTP
Sbjct: 125 KIADFGMCKEGISGDKTTKTFCGTP 149


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 78.2 bits (184), Expect = 2e-16
 Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 202 KIIKKSRLTNGQINHINKPAKIMNEINIMKALRHPCIISIEEVFDSRDAVYIILELMEGG 261
           K + K      +I    K + ++N       L+H  I+ +  +        I +EL  G 
Sbjct: 83  KALYKGEQVAAKIIQTEKYSNMLNSEKHASFLKHSNIVKVLMIEQGASLSLITMELC-GT 141

Query: 262 ELFDRITKFSHLTEPLTRFIFRQMVLAVKYLHSQGITHRDLKPENVLLEGDEDETLVKIT 321
            L +R+ + + L +     I + +  A+++ H+ GI H D+KP+N+L+  +      K+T
Sbjct: 142 TLQNRLDE-AILIKNERICILKSITCALQFCHNAGIVHADVKPKNILMSKNGQP---KLT 197

Query: 322 DFGLSKFVGEDSFMKTMCGTPLYLAPEVLRANGQNTYGPEVDVWSLGVIFFVCLVGYLPF 381
           DFG S  +G  + +    GTP Y APEV++   QN   P  D++SLG++ +  L   LPF
Sbjct: 198 DFGSSVLIGAPNEIDKFYGTPGYTAPEVIK---QNRPTPAADIYSLGIVAWQMLFRKLPF 254

Query: 382 S 382
           +
Sbjct: 255 A 255


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 70.9 bits (166), Expect = 2e-14
 Identities = 36/103 (34%), Positives = 63/103 (61%), Gaps = 9/103 (8%)

Query: 289 VKYLHSQGITHRDLKPENVLLEGDEDETLVKITDFGLSKFVGEDSFMKTMCGTPLYLAPE 348
           ++YLHSQG+ HRD+K +NVLL   + E   K+TDFG    + E   + ++ GTP+++APE
Sbjct: 710 IRYLHSQGLVHRDVKLKNVLL---DIENRAKLTDFGFC--ITEVMMLGSIVGTPVHMAPE 764

Query: 349 VLRANGQNTYGPEVDVWSLGVIFFVCLVGYLPFSHDYKEMSLK 391
           +L  +    Y   VDV++ G++F+    G++   + +++   K
Sbjct: 765 LLSGH----YDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNK 803


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 70.9 bits (166), Expect = 2e-14
 Identities = 36/103 (34%), Positives = 63/103 (61%), Gaps = 9/103 (8%)

Query: 289 VKYLHSQGITHRDLKPENVLLEGDEDETLVKITDFGLSKFVGEDSFMKTMCGTPLYLAPE 348
           ++YLHSQG+ HRD+K +NVLL   + E   K+TDFG    + E   + ++ GTP+++APE
Sbjct: 748 IRYLHSQGLVHRDVKLKNVLL---DIENRAKLTDFGFC--ITEVMMLGSIVGTPVHMAPE 802

Query: 349 VLRANGQNTYGPEVDVWSLGVIFFVCLVGYLPFSHDYKEMSLK 391
           +L  +    Y   VDV++ G++F+    G++   + +++   K
Sbjct: 803 LLSGH----YDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNK 841


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 53.6 bits (123), Expect = 4e-09
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 13/153 (8%)

Query: 224 MNEINIMKALRHPCIISIEEVFDSRDAVYIILELMEGGELFDRITKFSHLTEPLTRFI-- 281
           + E +IM    HP +I ++ V    + V II E ME G L D   + +     + + +  
Sbjct: 682 LTEASIMGQFEHPNVIFLQGVVTKSNPVMIITEFMENGSL-DTFLRANDGKFQVLQLVGM 740

Query: 282 FRQMVLAVKYLHSQGITHRDLKPENVLLEGDEDETLVKITDFGLSKFV---GEDSFMKTM 338
            R +   ++YL      HRDL   NVL+       + KI DFGLS+ +    E ++    
Sbjct: 741 LRGIASGMQYLAEMNYVHRDLAARNVLVNA---ALVCKIADFGLSREIESATEGAYTTRG 797

Query: 339 CGTPL-YLAPEVLRANGQNTYGPEVDVWSLGVI 370
              P+ + APE +       +    DVWS+G++
Sbjct: 798 GKIPVRWTAPEAI---AFRKFTSASDVWSMGIV 827


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 335 MKTMCGTPLYLAPEVLRANGQNTYGPEVD---VWSLGVIFFVCLVG 377
           M T   T   LA +  + +  +TY   V    ++SLG +F +C+ G
Sbjct: 132 MLTTTITLTLLAYQATKIHAVDTYAASVVGYLLYSLGQVFMLCIFG 177


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 76  CT-FIMRKDNIKESIIRNVSKLHFVIKRNLSELLSPAIITDLSHNG 120
           CT F+M KD++  S   +   L    ++N   L S + + + S NG
Sbjct: 500 CTKFLMHKDSLGLSTATSTCSLAVAKQQNQVPLTSSSNVNNNSGNG 545


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.135    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,328
Number of Sequences: 429
Number of extensions: 6208
Number of successful extensions: 37
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 11
length of query: 528
length of database: 140,377
effective HSP length: 61
effective length of query: 467
effective length of database: 114,208
effective search space: 53335136
effective search space used: 53335136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)