Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005367-TA|BGIBMGA005367-PA|IPR004582|Checkpoint protein
Rad24
(142 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein pr... 75 9e-14
BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe... 75 9e-14
AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe... 75 9e-14
AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein. 75 9e-14
AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint p... 75 9e-14
AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint p... 75 9e-14
AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint p... 75 9e-14
AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein. 75 9e-14
AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolo... 75 9e-14
AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein prot... 75 9e-14
AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint p... 75 9e-14
AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein. 75 1e-13
L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-... 33 0.27
CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein. 33 0.27
BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C (a... 33 0.27
BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C (a... 33 0.27
AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C (a... 33 0.27
AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5 ... 33 0.27
BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase interac... 31 1.9
AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase interac... 31 1.9
AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase interac... 31 1.9
AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase interac... 31 1.9
AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase interac... 31 1.9
AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL... 31 1.9
AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase interac... 31 1.9
M23234-1|AAA36207.1| 1279|Homo sapiens protein ( Human membrane ... 30 2.5
EF034088-1|ABJ53424.1| 1286|Homo sapiens ATP-binding cassette, s... 30 2.5
BC042531-1|AAH42531.1| 1286|Homo sapiens ATP-binding cassette, s... 30 2.5
AY490254-1|AAR99172.1| 164|Homo sapiens P-glycoprotein protein. 30 2.5
AC006154-1|AAD05023.1| 407|Homo sapiens unknown protein. 30 2.5
M29447-1|AAA59576.1| 1280|Homo sapiens P glycoprotein protein. 29 4.3
M14758-1|AAA59575.1| 1280|Homo sapiens PGY1 protein. 29 4.3
BC130424-1|AAI30425.1| 1280|Homo sapiens ATP-binding cassette, s... 29 4.3
AY910577-1|AAW82430.1| 1280|Homo sapiens ATP-binding cassette, s... 29 4.3
AF016535-1|AAB69423.1| 1279|Homo sapiens P-glycoprotein protein. 29 4.3
AB208970-1|BAD92207.1| 1062|Homo sapiens Multidrug resistance pr... 29 4.3
Y16610-1|CAA76314.1| 795|Homo sapiens paraplegin protein. 29 7.6
X52104-1|CAA36324.1| 614|Homo sapiens protein ( Human mRNA for ... 29 7.6
X15729-1|CAA33751.1| 614|Homo sapiens protein ( Human mRNA for ... 29 7.6
BT006943-1|AAP35589.1| 614|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 29 7.6
BC050576-1|AAH50576.1| 479|Homo sapiens chromosome 9 open readi... 29 7.6
BC035929-1|AAH35929.1| 732|Homo sapiens SPG7 protein protein. 29 7.6
BC034776-1|AAH34776.1| 479|Homo sapiens chromosome 9 open readi... 29 7.6
BC016027-1|AAH16027.1| 614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 29 7.6
AL445645-1|CAH72109.1| 479|Homo sapiens chromosome 9 open readi... 29 7.6
AL160165-5|CAH70535.1| 479|Homo sapiens chromosome 9 open readi... 29 7.6
AK093446-1|BAC04168.1| 275|Homo sapiens protein ( Homo sapiens ... 29 7.6
AK057266-1|BAB71402.1| 479|Homo sapiens protein ( Homo sapiens ... 29 7.6
AF080525-1|AAD28099.1| 795|Homo sapiens paraplegin protein. 29 7.6
AF015812-1|AAB84094.1| 614|Homo sapiens RNA helicase p68 protein. 29 7.6
AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase interac... 29 7.6
>BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein
protein.
Length = 670
Score = 74.9 bits (176), Expect = 9e-14
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLIIA 103
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ I++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 104 KKHNVKITEWITPIDIEFPNDN 125
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
>BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 74.9 bits (176), Expect = 9e-14
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLIIA 103
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ I++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 104 KKHNVKITEWITPIDIEFPNDN 125
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
>AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 74.9 bits (176), Expect = 9e-14
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLIIA 103
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ I++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 104 KKHNVKITEWITPIDIEFPNDN 125
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
>AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein.
Length = 670
Score = 74.9 bits (176), Expect = 9e-14
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLIIA 103
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ I++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 104 KKHNVKITEWITPIDIEFPNDN 125
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
>AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 74.9 bits (176), Expect = 9e-14
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLIIA 103
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ I++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 104 KKHNVKITEWITPIDIEFPNDN 125
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
>AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 74.9 bits (176), Expect = 9e-14
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLIIA 103
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ I++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 104 KKHNVKITEWITPIDIEFPNDN 125
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
>AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 74.9 bits (176), Expect = 9e-14
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLIIA 103
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ I++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 104 KKHNVKITEWITPIDIEFPNDN 125
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
>AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein.
Length = 670
Score = 74.9 bits (176), Expect = 9e-14
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLIIA 103
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ I++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 104 KKHNVKITEWITPIDIEFPNDN 125
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
>AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolog
protein.
Length = 681
Score = 74.9 bits (176), Expect = 9e-14
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLIIA 103
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ I++
Sbjct: 92 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 151
Query: 104 KKHNVKITEWITPIDIEFPNDN 125
K+H +++ EWI P+ +F D+
Sbjct: 152 KEHGIQVQEWINPVLPDFQKDD 173
>AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein
protein.
Length = 670
Score = 74.9 bits (176), Expect = 9e-14
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLIIA 103
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ I++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 104 KKHNVKITEWITPIDIEFPNDN 125
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
>AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint
protein RAD17 protein.
Length = 670
Score = 74.9 bits (176), Expect = 9e-14
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLIIA 103
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ I++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 104 KKHNVKITEWITPIDIEFPNDN 125
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
>AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein.
Length = 584
Score = 74.5 bits (175), Expect = 1e-13
Identities = 30/76 (39%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 54 VNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLIIAKKHNVK 109
+N ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ I++K+H ++
Sbjct: 1 MNQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQ 60
Query: 110 ITEWITPIDIEFPNDN 125
+ EWI P+ +F D+
Sbjct: 61 VQEWINPVLPDFQKDD 76
>L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-kDa
subunit protein.
Length = 340
Score = 33.5 bits (73), Expect = 0.27
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLIIAKK 105
+ + P +NDL H Q++ I I ++ LLL GP G GK+ T+L AK+
Sbjct: 23 VEKYRPQTLNDLISH----QDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQ 76
>CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein.
Length = 340
Score = 33.5 bits (73), Expect = 0.27
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLIIAKK 105
+ + P +NDL H Q++ I I ++ LLL GP G GK+ T+L AK+
Sbjct: 23 VEKYRPQTLNDLISH----QDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQ 76
>BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 33.5 bits (73), Expect = 0.27
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLIIAKK 105
+ + P +NDL H Q++ I I ++ LLL GP G GK+ T+L AK+
Sbjct: 23 VEKYRPQTLNDLISH----QDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQ 76
>BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 33.5 bits (73), Expect = 0.27
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLIIAKK 105
+ + P +NDL H Q++ I I ++ LLL GP G GK+ T+L AK+
Sbjct: 23 VEKYRPQTLNDLISH----QDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQ 76
>AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 33.5 bits (73), Expect = 0.27
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLIIAKK 105
+ + P +NDL H Q++ I I ++ LLL GP G GK+ T+L AK+
Sbjct: 23 VEKYRPQTLNDLISH----QDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQ 76
>AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5
isoform 1 variant protein.
Length = 351
Score = 33.5 bits (73), Expect = 0.27
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 48 IRNFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLIIAKK 105
+ + P +NDL H Q++ I I ++ LLL GP G GK+ T+L AK+
Sbjct: 37 VEKYRPQTLNDLISH----QDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQ 90
>BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 77 IKKNTSEMLLLTGPVGCGKSVTVLIIA---KKHNVK 109
++ N L+L GP GCGK+ IIA KKH+++
Sbjct: 256 LETNEIPSLILWGPPGCGKTTLAHIIASNSKKHSIR 291
>AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 445
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 77 IKKNTSEMLLLTGPVGCGKSVTVLIIA---KKHNVK 109
++ N L+L GP GCGK+ IIA KKH+++
Sbjct: 36 LETNEIPSLILWGPPGCGKTTLAHIIASNSKKHSIR 71
>AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 665
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 77 IKKNTSEMLLLTGPVGCGKSVTVLIIA---KKHNVK 109
++ N L+L GP GCGK+ IIA KKH+++
Sbjct: 256 LETNEIPSLILWGPPGCGKTTLAHIIASNSKKHSIR 291
>AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 77 IKKNTSEMLLLTGPVGCGKSVTVLIIA---KKHNVK 109
++ N L+L GP GCGK+ IIA KKH+++
Sbjct: 256 LETNEIPSLILWGPPGCGKTTLAHIIASNSKKHSIR 291
>AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 665
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 77 IKKNTSEMLLLTGPVGCGKSVTVLIIA---KKHNVK 109
++ N L+L GP GCGK+ IIA KKH+++
Sbjct: 256 LETNEIPSLILWGPPGCGKTTLAHIIASNSKKHSIR 291
>AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL
protein.
Length = 445
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 77 IKKNTSEMLLLTGPVGCGKSVTVLIIA---KKHNVK 109
++ N L+L GP GCGK+ IIA KKH+++
Sbjct: 36 LETNEIPSLILWGPPGCGKTTLAHIIASNSKKHSIR 71
>AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 646
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 77 IKKNTSEMLLLTGPVGCGKSVTVLIIA---KKHNVK 109
++ N L+L GP GCGK+ IIA KKH+++
Sbjct: 237 LETNEIPSLILWGPPGCGKTTLAHIIASNSKKHSIR 272
>M23234-1|AAA36207.1| 1279|Homo sapiens protein ( Human membrane
glycoprotein P (mdr3) mRNA, complete cds. ).
Length = 1279
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 76 NIKKNTSEMLLLTGPVGCGKSVTVLIIAKKHN 107
N+K + + + L G GCGKS TV +I + ++
Sbjct: 416 NLKVQSGQTVALVGSSGCGKSTTVQLIQRLYD 447
>EF034088-1|ABJ53424.1| 1286|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 4 protein.
Length = 1286
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 76 NIKKNTSEMLLLTGPVGCGKSVTVLIIAKKHN 107
N+K + + + L G GCGKS TV +I + ++
Sbjct: 416 NLKVQSGQTVALVGSSGCGKSTTVQLIQRLYD 447
>BC042531-1|AAH42531.1| 1286|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 4 protein.
Length = 1286
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 76 NIKKNTSEMLLLTGPVGCGKSVTVLIIAKKHN 107
N+K + + + L G GCGKS TV +I + ++
Sbjct: 416 NLKVQSGQTVALVGSSGCGKSTTVQLIQRLYD 447
>AY490254-1|AAR99172.1| 164|Homo sapiens P-glycoprotein protein.
Length = 164
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 76 NIKKNTSEMLLLTGPVGCGKSVTVLIIAKKHNVKITEWITPIDIE 120
N+K + + + L G GCGKS TV ++ + ++ TE + P ++
Sbjct: 43 NLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDP--TEGMLPFQLQ 85
>AC006154-1|AAD05023.1| 407|Homo sapiens unknown protein.
Length = 407
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 76 NIKKNTSEMLLLTGPVGCGKSVTVLIIAKKHN 107
N+K + + + L G GCGKS TV +I + ++
Sbjct: 371 NLKVQSGQTVALVGSSGCGKSTTVQLIQRLYD 402
>M29447-1|AAA59576.1| 1280|Homo sapiens P glycoprotein protein.
Length = 1280
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 76 NIKKNTSEMLLLTGPVGCGKSVTVLIIAKKHNVKITEWITPID 118
N+K + + + L G GCGKS TV ++ + ++ TE + +D
Sbjct: 414 NLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDP--TEGMVSVD 454
>M14758-1|AAA59575.1| 1280|Homo sapiens PGY1 protein.
Length = 1280
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 76 NIKKNTSEMLLLTGPVGCGKSVTVLIIAKKHNVKITEWITPID 118
N+K + + + L G GCGKS TV ++ + ++ TE + +D
Sbjct: 414 NLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDP--TEGMVSVD 454
>BC130424-1|AAI30425.1| 1280|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 1 protein.
Length = 1280
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 76 NIKKNTSEMLLLTGPVGCGKSVTVLIIAKKHNVKITEWITPID 118
N+K + + + L G GCGKS TV ++ + ++ TE + +D
Sbjct: 414 NLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDP--TEGMVSVD 454
>AY910577-1|AAW82430.1| 1280|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 1 protein.
Length = 1280
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 76 NIKKNTSEMLLLTGPVGCGKSVTVLIIAKKHNVKITEWITPID 118
N+K + + + L G GCGKS TV ++ + ++ TE + +D
Sbjct: 414 NLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDP--TEGMVSVD 454
>AF016535-1|AAB69423.1| 1279|Homo sapiens P-glycoprotein protein.
Length = 1279
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 76 NIKKNTSEMLLLTGPVGCGKSVTVLIIAKKHNVKITEWITPID 118
N+K + + + L G GCGKS TV ++ + ++ TE + +D
Sbjct: 413 NLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDP--TEGMVSVD 453
>AB208970-1|BAD92207.1| 1062|Homo sapiens Multidrug resistance
protein 1 variant protein.
Length = 1062
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 76 NIKKNTSEMLLLTGPVGCGKSVTVLIIAKKHNVKITEWITPID 118
N+K + + + L G GCGKS TV ++ + ++ TE + +D
Sbjct: 196 NLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDP--TEGMVSVD 236
>Y16610-1|CAA76314.1| 795|Homo sapiens paraplegin protein.
Length = 795
Score = 28.7 bits (61), Expect = 7.6
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 11/106 (10%)
Query: 23 TSSPAKFSKSNTIKPMIFNIIDQNHIRNFDPVNINDLA-IHNKK--VQEVEDWILG---- 75
T FS N +K F I+D + V+ D+A +H K V+E D++
Sbjct: 278 TGREGGFSAFNQLKMARFTIVDGKMGKG---VSFKDVAGMHEAKLEVREFVDYLKSPERF 334
Query: 76 -NIKKNTSEMLLLTGPVGCGKSVTVLIIAKKHNVKITEWITPIDIE 120
+ + LL GP GCGK++ +A + V P +E
Sbjct: 335 LQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVE 380
>X52104-1|CAA36324.1| 614|Homo sapiens protein ( Human mRNA for p68
protein. ).
Length = 614
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 59 LAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSV 97
+ IH K Q+ DW+L K + +L+ T G V
Sbjct: 369 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDV 407
>X15729-1|CAA33751.1| 614|Homo sapiens protein ( Human mRNA for
nuclear p68 protein. ).
Length = 614
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 59 LAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSV 97
+ IH K Q+ DW+L K + +L+ T G V
Sbjct: 369 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDV 407
>BT006943-1|AAP35589.1| 614|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase,
68kDa) protein.
Length = 614
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 59 LAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSV 97
+ IH K Q+ DW+L K + +L+ T G V
Sbjct: 369 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDV 407
>BC050576-1|AAH50576.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 28.7 bits (61), Expect = 7.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 85 LLLTGPVGCGKSVTVLIIAKKHNV 108
+LL GPVG GKS+ ++A+K+ +
Sbjct: 271 VLLLGPVGSGKSLQAALLAQKYRL 294
>BC035929-1|AAH35929.1| 732|Homo sapiens SPG7 protein protein.
Length = 732
Score = 28.7 bits (61), Expect = 7.6
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 11/106 (10%)
Query: 23 TSSPAKFSKSNTIKPMIFNIIDQNHIRNFDPVNINDLA-IHNKK--VQEVEDWILG---- 75
T FS N +K F I+D + V+ D+A +H K V+E D++
Sbjct: 215 TGREGGFSAFNQLKMARFTIVDGKMGKG---VSFKDVAGMHEAKLEVREFVDYLKSPERF 271
Query: 76 -NIKKNTSEMLLLTGPVGCGKSVTVLIIAKKHNVKITEWITPIDIE 120
+ + LL GP GCGK++ +A + V P +E
Sbjct: 272 LQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVE 317
>BC034776-1|AAH34776.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 28.7 bits (61), Expect = 7.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 85 LLLTGPVGCGKSVTVLIIAKKHNV 108
+LL GPVG GKS+ ++A+K+ +
Sbjct: 271 VLLLGPVGSGKSLQAALLAQKYRL 294
>BC016027-1|AAH16027.1| 614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 5 protein.
Length = 614
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 59 LAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSV 97
+ IH K Q+ DW+L K + +L+ T G V
Sbjct: 369 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDV 407
>AL445645-1|CAH72109.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 28.7 bits (61), Expect = 7.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 85 LLLTGPVGCGKSVTVLIIAKKHNV 108
+LL GPVG GKS+ ++A+K+ +
Sbjct: 271 VLLLGPVGSGKSLQAALLAQKYRL 294
>AL160165-5|CAH70535.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 28.7 bits (61), Expect = 7.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 85 LLLTGPVGCGKSVTVLIIAKKHNV 108
+LL GPVG GKS+ ++A+K+ +
Sbjct: 271 VLLLGPVGSGKSLQAALLAQKYRL 294
>AK093446-1|BAC04168.1| 275|Homo sapiens protein ( Homo sapiens
cDNA FLJ36127 fis, clone TESTI2024446, weakly similar to
ADENYLATE KINASE, CHLOROPLAST (EC 2.7.4.3). ).
Length = 275
Score = 28.7 bits (61), Expect = 7.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 85 LLLTGPVGCGKSVTVLIIAKKHNV 108
+LL GPVG GKS+ ++A+K+ +
Sbjct: 67 VLLLGPVGSGKSLQAALLAQKYRL 90
>AK057266-1|BAB71402.1| 479|Homo sapiens protein ( Homo sapiens
cDNA FLJ32704 fis, clone TESTI2000591, weakly similar to
ADENYLATE KINASE, CHLOROPLAST (EC 2.7.4.3). ).
Length = 479
Score = 28.7 bits (61), Expect = 7.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 85 LLLTGPVGCGKSVTVLIIAKKHNV 108
+LL GPVG GKS+ ++A+K+ +
Sbjct: 271 VLLLGPVGSGKSLQAALLAQKYRL 294
>AF080525-1|AAD28099.1| 795|Homo sapiens paraplegin protein.
Length = 795
Score = 28.7 bits (61), Expect = 7.6
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 11/106 (10%)
Query: 23 TSSPAKFSKSNTIKPMIFNIIDQNHIRNFDPVNINDLA-IHNKK--VQEVEDWILG---- 75
T FS N +K F I+D + V+ D+A +H K V+E D++
Sbjct: 278 TGREGGFSAFNQLKMARFTIVDGKMGKG---VSFKDVAGMHEAKLEVREFVDYLKSPERF 334
Query: 76 -NIKKNTSEMLLLTGPVGCGKSVTVLIIAKKHNVKITEWITPIDIE 120
+ + LL GP GCGK++ +A + V P +E
Sbjct: 335 LQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVE 380
>AF015812-1|AAB84094.1| 614|Homo sapiens RNA helicase p68 protein.
Length = 614
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 59 LAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSV 97
+ IH K Q+ DW+L K + +L+ T G V
Sbjct: 369 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDV 407
>AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase
interacting protein protein.
Length = 665
Score = 28.7 bits (61), Expect = 7.6
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 77 IKKNTSEMLLLTGPVGCGKSVTVLIIA---KKHNVK 109
++ N L L GP GCGK+ IIA KKH+++
Sbjct: 256 LETNEIPSLNLWGPPGCGKTTLAHIIASNSKKHSIR 291
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.318 0.136 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,342,160
Number of Sequences: 224733
Number of extensions: 804852
Number of successful extensions: 2467
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2412
Number of HSP's gapped (non-prelim): 60
length of query: 142
length of database: 73,234,838
effective HSP length: 83
effective length of query: 59
effective length of database: 54,581,999
effective search space: 3220337941
effective search space used: 3220337941
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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