GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005366-TA|BGIBMGA005366-PA|undefined
         (126 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p pro...    39   0.002
AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA...    39   0.002
AE014297-4128|AAF56713.2|  391|Drosophila melanogaster CG13976-P...    27   9.7  

>AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p
           protein.
          Length = 2486

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 16/20 (80%), Positives = 19/20 (95%)

Query: 61  EEDIIDGFAIMAFRTYEDLE 80
           EE+IIDGFAI+ F+TYEDLE
Sbjct: 465 EEEIIDGFAILEFKTYEDLE 484


>AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA
           protein.
          Length = 2486

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 16/20 (80%), Positives = 19/20 (95%)

Query: 61  EEDIIDGFAIMAFRTYEDLE 80
           EE+IIDGFAI+ F+TYEDLE
Sbjct: 465 EEEIIDGFAILEFKTYEDLE 484


>AE014297-4128|AAF56713.2|  391|Drosophila melanogaster CG13976-PA
           protein.
          Length = 391

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 68  FAIMAFRTYEDLEVRFDVDYFFINISFTKTLARKRIIAL 106
           F  + F +Y      ++ DY F+N  F+ T+     +AL
Sbjct: 43  FVSLGFSSYWRFSFDYEFDYDFLNDRFSSTIDLSNFVAL 81


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.139    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,575,716
Number of Sequences: 52641
Number of extensions: 91237
Number of successful extensions: 99
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96
Number of HSP's gapped (non-prelim): 3
length of query: 126
length of database: 24,830,863
effective HSP length: 77
effective length of query: 49
effective length of database: 20,777,506
effective search space: 1018097794
effective search space used: 1018097794
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)