Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005364-TA|BGIBMGA005364-PA|IPR001611|Leucine-rich repeat
(204 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 52 4e-09
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 25 0.38
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 22 3.6
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 22 3.6
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 22 3.6
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 4.7
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 21 6.2
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 52.0 bits (119), Expect = 4e-09
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Query: 51 LRLEGNKIDTIRSIVQNSHYKRLADLYLDNNSIAAVKELEGSEWFSTFRVLSLRGNYLKQ 110
L LE N+I ++ + L +LYL NN I + L + +L L GN L
Sbjct: 847 LHLEDNRIRELKGF-EFERLSHLRELYLQNNLIGFIGNLTFLP-LRSLEILRLSGNRLVT 904
Query: 111 IPVYAFDKAFQANNNIMHVFLGQNPWRCDCHFIPRFQGLLLKYKRVIRDLTDIRCSKSSD 170
PV+ N ++ + LG NPW C C F+ + + D +D+ C D
Sbjct: 905 FPVWQVT----LNARLVELSLGSNPWSCRCKFLQELSSWVSDNAHKVVDASDVWCYYGGD 960
Query: 171 KK 172
+
Sbjct: 961 AR 962
Score = 33.5 bits (73), Expect = 0.001
Identities = 19/89 (21%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 30 VDCSDKQLTAAPASLPPSVTTLRLEGNKIDTIRSIVQNSHYKRLADLYLDNNSIAAVKEL 89
VDCS + P +P T + L+GN + +++ V K + LY++ + I +++
Sbjct: 778 VDCSGLGVEEIPRRIPMDATEVYLDGNVLRELQNHVFIGR-KNMRVLYVNGSGIESIQN- 835
Query: 90 EGSEWFSTFRVLSLRGNYLKQIPVYAFDK 118
+ ++L L N ++++ + F++
Sbjct: 836 RTFNGLNNLQILHLEDNRIRELKGFEFER 864
Score = 29.1 bits (62), Expect = 0.031
Identities = 24/109 (22%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 76 LYLDNNSIAAVKELEGSEWFSTFRVLSLRGNYLKQIPVYAFDKAFQANNN-IMHVFLGQN 134
L+++NN I V+ ++ + RV + N ++ + + + A + + ++G N
Sbjct: 622 LFINNNYINLVRPNTFTDKVNLTRV-DMYANMIETMELTSLLLTKVAEDRPLPEFYIGGN 680
Query: 135 PWRCDC--HFIPRF--QGLLLKYKRVIRDLTDIRCSKSSDKKTSLVQVS 179
P+ C+C ++P Q +Y R++ DL ++ C S + ++V S
Sbjct: 681 PFNCNCSMDWLPGINNQTSTREYPRIM-DLDNVMCRTSGPRGVAIVSAS 728
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 25.4 bits (53), Expect = 0.38
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 28 ITVDCSDKQLTAAPASLPPSVTTLRLEGNKIDTIRSIVQNSHYKRLADLYLDNNSIAAVK 87
+ +DC K+ T P + T +L + DT+R I QN LA +D + +V
Sbjct: 870 LMLDCWQKERTHRPTFANLTQTLDKLIRSP-DTLRKIAQNRGTNPLAPDAVDLTQLTSV- 927
Query: 88 ELEGSEWFSTFRV 100
SEW ++ ++
Sbjct: 928 ----SEWLASIKM 936
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 22.2 bits (45), Expect = 3.6
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 154 KRVIRDLTDIRCSKSSDKKTSLVQVSMQAQQVVDQHNRLW 193
KRV+ D C K +DK+ +++ ++ +V+ LW
Sbjct: 65 KRVLPDALATDCKKCTDKQREVIKKVIKF--LVENKPELW 102
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 22.2 bits (45), Expect = 3.6
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 154 KRVIRDLTDIRCSKSSDKKTSLVQVSMQAQQVVDQHNRLW 193
KRV+ D C K +DK+ +++ ++ +V+ LW
Sbjct: 65 KRVLPDALATDCKKCTDKQREVIKKVIKF--LVENKPELW 102
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 22.2 bits (45), Expect = 3.6
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 154 KRVIRDLTDIRCSKSSDKKTSLVQVSMQAQQVVDQHNRLW 193
KRV+ D C K +DK+ +++ ++ +V+ LW
Sbjct: 65 KRVLPDALATDCKKCTDKQREVIKKVIKF--LVENKPELW 102
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 4.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 162 DIRCSKSSDKKTSLVQVSMQAQQVVDQHNRL 192
D R SD+ +L +V+DQH++L
Sbjct: 338 DRRTRHLSDRVVALEAEKKNLSKVIDQHSQL 368
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 21.4 bits (43), Expect = 6.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 34 DKQLTAAPASLPPSVTTLRLEGNKID 59
D+ A P PP ++T +G+ ID
Sbjct: 219 DEDDGATPRKAPPQLSTTDKKGSAID 244
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.324 0.136 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,452
Number of Sequences: 429
Number of extensions: 2385
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 10
length of query: 204
length of database: 140,377
effective HSP length: 55
effective length of query: 149
effective length of database: 116,782
effective search space: 17400518
effective search space used: 17400518
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 42 (21.0 bits)
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