Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005361-TA|BGIBMGA005361-PA|undefined
(212 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY013251-1|AAG48511.1| 470|Homo sapiens hUPF3B protein. 31 3.0
AF318576-1|AAG60691.1| 483|Homo sapiens UPF3X protein. 31 3.0
L14837-1|AAA02891.1| 1736|Homo sapiens tight junction (zonula oc... 31 3.9
DQ015919-1|AAY22179.1| 1748|Homo sapiens tight junction protein ... 31 3.9
BC111712-1|AAI11713.1| 1748|Homo sapiens tight junction protein ... 31 3.9
AB051476-1|BAB21780.3| 2627|Homo sapiens KIAA1689 protein protein. 31 3.9
U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein. 30 5.2
U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein. 30 5.2
D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein. 30 5.2
D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein. 30 5.2
BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein. 30 5.2
AL161729-2|CAH73818.1| 1296|Homo sapiens patched homolog 1 (Dros... 30 5.2
AL161729-1|CAH73817.1| 1447|Homo sapiens patched homolog 1 (Dros... 30 5.2
AK124593-1|BAC85893.1| 242|Homo sapiens protein ( Homo sapiens ... 30 5.2
AB209345-1|BAD92582.1| 774|Homo sapiens atrophin-1 variant prot... 30 5.2
BC035512-1|AAH35512.1| 697|Homo sapiens WD repeat domain 49 pro... 30 6.8
BC011889-1|AAH11889.1| 424|Homo sapiens protein kinase C and ca... 30 6.8
BC007914-1|AAH07914.1| 424|Homo sapiens protein kinase C and ca... 30 6.8
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom... 30 6.8
AL512408-2|CAI23483.1| 1175|Homo sapiens AT rich interactive dom... 30 6.8
AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive dom... 30 6.8
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom... 30 6.8
AL034380-7|CAI21622.1| 1175|Homo sapiens AT rich interactive dom... 30 6.8
AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive dom... 30 6.8
AK090939-1|BAC03552.1| 522|Homo sapiens protein ( Homo sapiens ... 30 6.8
AK000577-1|BAA91267.1| 405|Homo sapiens protein ( Homo sapiens ... 30 6.8
AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remod... 30 6.8
AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein pr... 30 6.8
AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein... 30 6.8
AF242530-1|AAK29207.1| 424|Homo sapiens protein kinase C and ca... 30 6.8
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ... 30 6.8
AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling f... 30 6.8
AF149825-1|AAG31023.1| 424|Homo sapiens PACSIN3 protein. 30 6.8
AF130979-1|AAF04472.1| 424|Homo sapiens SH3 domain-containing p... 30 6.8
AB210022-1|BAE06104.1| 1374|Homo sapiens ARID1A variant protein ... 30 6.8
AB177856-1|BAD66834.1| 1484|Homo sapiens LAR splice variant 1 pr... 30 6.8
AB051293-1|BAB55599.1| 1208|Homo sapiens SWI related protein pro... 30 6.8
AB024075-1|BAA83073.1| 1119|Homo sapiens B120 protein. 30 6.8
AB001895-1|BAA23269.1| 1142|Homo sapiens B120 protein. 30 6.8
L78838-3|AAL40088.1| 635|Homo sapiens T cell surface glycoprote... 29 9.0
BC131772-1|AAI31773.1| 983|Homo sapiens PHC3 protein protein. 29 9.0
BC034028-1|AAH34028.1| 387|Homo sapiens SHANK-associated RH dom... 29 9.0
BC025244-1|AAH25244.1| 326|Homo sapiens SHARPIN protein protein. 29 9.0
BC012925-1|AAH12925.1| 721|Homo sapiens MLXIPL protein protein. 29 9.0
AL360169-1|CAI16559.1| 1543|Homo sapiens RP3-442A17.1 protein. 29 9.0
AL353800-1|CAI20993.1| 1543|Homo sapiens RP3-442A17.1 protein. 29 9.0
AK075518-1|BAC11666.1| 410|Homo sapiens protein ( Homo sapiens ... 29 9.0
AJ320486-1|CAC86587.2| 983|Homo sapiens homolog of polyhomeotic... 29 9.0
AJ279120-1|CAC21448.1| 2187|Homo sapiens TFNR protein. 29 9.0
AJ238520-1|CAC04245.1| 2254|Homo sapiens putative transcription ... 29 9.0
AF444193-1|AAM51781.1| 983|Homo sapiens polyhomeotic 3 protein ... 29 9.0
AF380154-1|AAM46139.1| 964|Homo sapiens early development regul... 29 9.0
AF245471-1|AAK20936.1| 833|Homo sapiens Mlx interactor beta pro... 29 9.0
AF245470-1|AAK20935.1| 852|Homo sapiens Mlx interactor alpha pr... 29 9.0
AF219946-1|AAF87975.1| 1544|Homo sapiens tubby super-family prot... 29 9.0
AF156673-1|AAF68176.1| 852|Homo sapiens putative hepatic transc... 29 9.0
AF156603-1|AAF68174.1| 852|Homo sapiens putative hepatic transc... 29 9.0
AB052764-1|BAC53797.1| 345|Homo sapiens shank-interacting prote... 29 9.0
AB051514-1|BAB21818.1| 1130|Homo sapiens KIAA1727 protein protein. 29 9.0
>AY013251-1|AAG48511.1| 470|Homo sapiens hUPF3B protein.
Length = 470
Score = 31.1 bits (67), Expect = 3.0
Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 8/146 (5%)
Query: 33 LQDEPEIRRSATLPAQSGYATKEDDRHRPQMCTIGTNTDPPPNMLER--LRILFKRQENE 90
L DE +S TLP +S K++ RP+ G + ER RIL +R+ +
Sbjct: 296 LSDERASGQSCTLPKRSDSELKDEKPKRPE-DESGRDYREREREYERDQERILRERERLK 354
Query: 91 TINHHRAGQFTIAPRETSFEVKEESSASKK-LSRIKKALANAKYKIAPRSETIESPKIV- 148
R Q +E +F+ KEE +K R K A + I +T + ++V
Sbjct: 355 RQEEERRRQKERYEKEKTFKRKEEEMKKEKDTLRDKGKKAESTESIGSSEKTEKKEEVVK 414
Query: 149 YDTSKPGDRMKTTF---GVRDNRRIC 171
D + DR G R R+C
Sbjct: 415 RDRIRNKDRPAMQLYQPGARSRNRLC 440
>AF318576-1|AAG60691.1| 483|Homo sapiens UPF3X protein.
Length = 483
Score = 31.1 bits (67), Expect = 3.0
Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 8/146 (5%)
Query: 33 LQDEPEIRRSATLPAQSGYATKEDDRHRPQMCTIGTNTDPPPNMLER--LRILFKRQENE 90
L DE +S TLP +S K++ RP+ G + ER RIL +R+ +
Sbjct: 309 LSDERASGQSCTLPKRSDSELKDEKPKRPE-DESGRDYREREREYERDQERILRERERLK 367
Query: 91 TINHHRAGQFTIAPRETSFEVKEESSASKK-LSRIKKALANAKYKIAPRSETIESPKIV- 148
R Q +E +F+ KEE +K R K A + I +T + ++V
Sbjct: 368 RQEEERRRQKERYEKEKTFKRKEEEMKKEKDTLRDKGKKAESTESIGSSEKTEKKEEVVK 427
Query: 149 YDTSKPGDRMKTTF---GVRDNRRIC 171
D + DR G R R+C
Sbjct: 428 RDRIRNKDRPAMQLYQPGARSRNRLC 453
>L14837-1|AAA02891.1| 1736|Homo sapiens tight junction (zonula
occludens) protein ZO-1 protein.
Length = 1736
Score = 30.7 bits (66), Expect = 3.9
Identities = 35/144 (24%), Positives = 55/144 (38%), Gaps = 11/144 (7%)
Query: 8 PVPPTRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHRPQMCTIG 67
P PP + P QP++ ++L I E S +L Q+ +K D P
Sbjct: 1415 PPPPLPSQYAQPSQPVTSASLHIHSKGAHGE-GNSVSLDFQNSLVSKPD----PPPSQNK 1469
Query: 68 TNTDPPPNMLERLRILFKRQ----ENETINHHRAGQFTIAPRETSFEVKEESSASKKLSR 123
T PPN + + F Q + +N Q T+ P F K +S+++ R
Sbjct: 1470 PATFRPPNREDTAQAAFYPQKSFPDKAPVNGTEQTQKTVTPAYNRFTPKPYTSSARPFER 1529
Query: 124 IKKALANAKYKIAPRSETIESPKI 147
K + + P SET P +
Sbjct: 1530 -KFESPKFNHNLLP-SETAHKPDL 1551
>DQ015919-1|AAY22179.1| 1748|Homo sapiens tight junction protein 1
(zona occludens 1) protein.
Length = 1748
Score = 30.7 bits (66), Expect = 3.9
Identities = 35/144 (24%), Positives = 55/144 (38%), Gaps = 11/144 (7%)
Query: 8 PVPPTRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHRPQMCTIG 67
P PP + P QP++ ++L I E S +L Q+ +K D P
Sbjct: 1427 PPPPLPSQYAQPSQPVTSASLHIHSKGAHGE-GNSVSLDFQNSLVSKPD----PPPSQNK 1481
Query: 68 TNTDPPPNMLERLRILFKRQ----ENETINHHRAGQFTIAPRETSFEVKEESSASKKLSR 123
T PPN + + F Q + +N Q T+ P F K +S+++ R
Sbjct: 1482 PATFRPPNREDTAQAAFYPQKSFPDKAPVNGTEQTQKTVTPAYNRFTPKPYTSSARPFER 1541
Query: 124 IKKALANAKYKIAPRSETIESPKI 147
K + + P SET P +
Sbjct: 1542 -KFESPKFNHNLLP-SETAHKPDL 1563
>BC111712-1|AAI11713.1| 1748|Homo sapiens tight junction protein 1
(zona occludens 1) protein.
Length = 1748
Score = 30.7 bits (66), Expect = 3.9
Identities = 35/144 (24%), Positives = 55/144 (38%), Gaps = 11/144 (7%)
Query: 8 PVPPTRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHRPQMCTIG 67
P PP + P QP++ ++L I E S +L Q+ +K D P
Sbjct: 1427 PPPPLPSQYAQPSQPVTSASLHIHSKGAHGE-GNSVSLDFQNSLVSKPD----PPPSQNK 1481
Query: 68 TNTDPPPNMLERLRILFKRQ----ENETINHHRAGQFTIAPRETSFEVKEESSASKKLSR 123
T PPN + + F Q + +N Q T+ P F K +S+++ R
Sbjct: 1482 PATFRPPNREDTAQAAFYPQKSFPDKAPVNGTEQTQKTVTPAYNRFTPKPYTSSARPFER 1541
Query: 124 IKKALANAKYKIAPRSETIESPKI 147
K + + P SET P +
Sbjct: 1542 -KFESPKFNHNLLP-SETAHKPDL 1563
>AB051476-1|BAB21780.3| 2627|Homo sapiens KIAA1689 protein protein.
Length = 2627
Score = 30.7 bits (66), Expect = 3.9
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 104 PRETS-FEVKEESSASKKLSRIKKALANAKYKIAPRSETIESPKIVYDTSKPGDRMKTTF 162
P+E E+K + R K LA A K ET ES K +Y+ ++M+T
Sbjct: 1423 PQEQKPLEIKPAPFVRSRFKRPKPNLARAALK----RETTESEKYIYEKKSETEKMETIV 1478
Query: 163 GVRDNRRICKMPSRSE 178
+N + +PS+ +
Sbjct: 1479 MQENNEQTDTLPSQHD 1494
>U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein.
Length = 1190
Score = 30.3 bits (65), Expect = 5.2
Identities = 35/133 (26%), Positives = 47/133 (35%), Gaps = 12/133 (9%)
Query: 6 PSPVPPTR-----DLWPPPQQPLSISTLQISYLQDEP----EIRRSATLPAQS-GYATKE 55
P P+PP L PPP P S L + ++ EP E S PA+S K
Sbjct: 694 PGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKV 753
Query: 56 DD--RHRPQMCTIGTNTDPPPNMLERLRILFKRQENETINHHRAGQFTIAPRETSFEVKE 113
D H Q + D N R + F E + RA RE +E
Sbjct: 754 VDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLEGSKLAKKRADLVEKVRREAEQRARE 813
Query: 114 ESSASKKLSRIKK 126
E ++ R K+
Sbjct: 814 EKEREREREREKE 826
>U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein.
Length = 1184
Score = 30.3 bits (65), Expect = 5.2
Identities = 35/133 (26%), Positives = 47/133 (35%), Gaps = 12/133 (9%)
Query: 6 PSPVPPTR-----DLWPPPQQPLSISTLQISYLQDEP----EIRRSATLPAQS-GYATKE 55
P P+PP L PPP P S L + ++ EP E S PA+S K
Sbjct: 688 PGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKV 747
Query: 56 DD--RHRPQMCTIGTNTDPPPNMLERLRILFKRQENETINHHRAGQFTIAPRETSFEVKE 113
D H Q + D N R + F E + RA RE +E
Sbjct: 748 VDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLEGSKLAKKRADLVEKVRREAEQRARE 807
Query: 114 ESSASKKLSRIKK 126
E ++ R K+
Sbjct: 808 EKEREREREREKE 820
>D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein.
Length = 1182
Score = 30.3 bits (65), Expect = 5.2
Identities = 35/133 (26%), Positives = 47/133 (35%), Gaps = 12/133 (9%)
Query: 6 PSPVPPTR-----DLWPPPQQPLSISTLQISYLQDEP----EIRRSATLPAQS-GYATKE 55
P P+PP L PPP P S L + ++ EP E S PA+S K
Sbjct: 689 PGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKV 748
Query: 56 DD--RHRPQMCTIGTNTDPPPNMLERLRILFKRQENETINHHRAGQFTIAPRETSFEVKE 113
D H Q + D N R + F E + RA RE +E
Sbjct: 749 VDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLEGSKLAKKRADLVEKVRREAEQRARE 808
Query: 114 ESSASKKLSRIKK 126
E ++ R K+
Sbjct: 809 EKEREREREREKE 821
>D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein.
Length = 1185
Score = 30.3 bits (65), Expect = 5.2
Identities = 35/133 (26%), Positives = 47/133 (35%), Gaps = 12/133 (9%)
Query: 6 PSPVPPTR-----DLWPPPQQPLSISTLQISYLQDEP----EIRRSATLPAQS-GYATKE 55
P P+PP L PPP P S L + ++ EP E S PA+S K
Sbjct: 689 PGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKV 748
Query: 56 DD--RHRPQMCTIGTNTDPPPNMLERLRILFKRQENETINHHRAGQFTIAPRETSFEVKE 113
D H Q + D N R + F E + RA RE +E
Sbjct: 749 VDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLEGSKLAKKRADLVEKVRREAEQRARE 808
Query: 114 ESSASKKLSRIKK 126
E ++ R K+
Sbjct: 809 EKEREREREREKE 821
>BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein.
Length = 1191
Score = 30.3 bits (65), Expect = 5.2
Identities = 35/133 (26%), Positives = 47/133 (35%), Gaps = 12/133 (9%)
Query: 6 PSPVPPTR-----DLWPPPQQPLSISTLQISYLQDEP----EIRRSATLPAQS-GYATKE 55
P P+PP L PPP P S L + ++ EP E S PA+S K
Sbjct: 695 PGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKV 754
Query: 56 DD--RHRPQMCTIGTNTDPPPNMLERLRILFKRQENETINHHRAGQFTIAPRETSFEVKE 113
D H Q + D N R + F E + RA RE +E
Sbjct: 755 VDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLEGSKLAKKRADLVEKVRREAEQRARE 814
Query: 114 ESSASKKLSRIKK 126
E ++ R K+
Sbjct: 815 EKEREREREREKE 827
>AL161729-2|CAH73818.1| 1296|Homo sapiens patched homolog 1
(Drosophila) protein.
Length = 1296
Score = 30.3 bits (65), Expect = 5.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 3 GERPSPVPPTRDLWPPPQQP 22
G++P PP LWPPP +P
Sbjct: 1148 GQQPRRDPPREGLWPPPYRP 1167
>AL161729-1|CAH73817.1| 1447|Homo sapiens patched homolog 1
(Drosophila) protein.
Length = 1447
Score = 30.3 bits (65), Expect = 5.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 3 GERPSPVPPTRDLWPPPQQP 22
G++P PP LWPPP +P
Sbjct: 1299 GQQPRRDPPREGLWPPPYRP 1318
>AK124593-1|BAC85893.1| 242|Homo sapiens protein ( Homo sapiens
cDNA FLJ42602 fis, clone BRACE3011271, moderately
similar to Patched protein. ).
Length = 242
Score = 30.3 bits (65), Expect = 5.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 3 GERPSPVPPTRDLWPPPQQP 22
G++P PP LWPPP +P
Sbjct: 91 GQQPRRDPPREGLWPPPYRP 110
>AB209345-1|BAD92582.1| 774|Homo sapiens atrophin-1 variant
protein.
Length = 774
Score = 30.3 bits (65), Expect = 5.2
Identities = 35/133 (26%), Positives = 47/133 (35%), Gaps = 12/133 (9%)
Query: 6 PSPVPPTR-----DLWPPPQQPLSISTLQISYLQDEP----EIRRSATLPAQS-GYATKE 55
P P+PP L PPP P S L + ++ EP E S PA+S K
Sbjct: 278 PGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKV 337
Query: 56 DD--RHRPQMCTIGTNTDPPPNMLERLRILFKRQENETINHHRAGQFTIAPRETSFEVKE 113
D H Q + D N R + F E + RA RE +E
Sbjct: 338 VDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLEGSKLAKKRADLVEKVRREAEQRARE 397
Query: 114 ESSASKKLSRIKK 126
E ++ R K+
Sbjct: 398 EKEREREREREKE 410
>BC035512-1|AAH35512.1| 697|Homo sapiens WD repeat domain 49
protein.
Length = 697
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 27 TLQISYLQDEPEIRRSATLPAQSGYATKEDDRHRPQMCTIGTNTDPPPNMLERLRILFKR 86
+L I L++ PE+ + A L Y KE + RPQ+ P++ + L+ +F
Sbjct: 614 SLNIGALEELPEVNKPAFLLDPEKYFRKEPEEERPQIL-------EAPSLFKTLKAVFDE 666
Query: 87 QE---NETINHHRAGQFTIAPRETSFEVKE 113
+ E ++H R + +E S EVK+
Sbjct: 667 KNLFPKEILHHERKAKQLC--QEKSCEVKK 694
>BC011889-1|AAH11889.1| 424|Homo sapiens protein kinase C and
casein kinase substrate in neurons 3 protein.
Length = 424
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 9 VPPTRD-LWPPPQQPLSISTLQISYLQDEPEIRRSAT---LPAQSGYATKEDD 57
+ PTRD PPPQ P S T Q DE R++AT + A YA +E D
Sbjct: 328 IVPTRDGTAPPPQSPGSPGTGQDEEWSDEESPRKAATGVRVRALYDYAGQEAD 380
>BC007914-1|AAH07914.1| 424|Homo sapiens protein kinase C and
casein kinase substrate in neurons 3 protein.
Length = 424
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 9 VPPTRD-LWPPPQQPLSISTLQISYLQDEPEIRRSAT---LPAQSGYATKEDD 57
+ PTRD PPPQ P S T Q DE R++AT + A YA +E D
Sbjct: 328 IVPTRDGTAPPPQSPGSPGTGQDEEWSDEESPRKAATGVRVRALYDYAGQEAD 380
>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 4 ERPSPVPP---TRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHR 60
+ P+P P T P Q P S Q Y Q +P+ +TL Q+ Y + +
Sbjct: 529 QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAY--PQPQSQQ 586
Query: 61 PQMCTIGTNTDPPPNMLER 79
Q PPP L +
Sbjct: 587 SQQTAYSQQRFPPPQELSQ 605
>AL512408-2|CAI23483.1| 1175|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1175
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 4 ERPSPVPP---TRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHR 60
+ P+P P T P Q P S Q Y Q +P+ +TL Q+ Y + +
Sbjct: 146 QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAY--PQPQSQQ 203
Query: 61 PQMCTIGTNTDPPPNMLER 79
Q PPP L +
Sbjct: 204 SQQTAYSQQRFPPPQELSQ 222
>AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 4 ERPSPVPP---TRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHR 60
+ P+P P T P Q P S Q Y Q +P+ +TL Q+ Y + +
Sbjct: 146 QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAY--PQPQSQQ 203
Query: 61 PQMCTIGTNTDPPPNMLER 79
Q PPP L +
Sbjct: 204 SQQTAYSQQRFPPPQELSQ 222
>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 4 ERPSPVPP---TRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHR 60
+ P+P P T P Q P S Q Y Q +P+ +TL Q+ Y + +
Sbjct: 529 QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAY--PQPQSQQ 586
Query: 61 PQMCTIGTNTDPPPNMLER 79
Q PPP L +
Sbjct: 587 SQQTAYSQQRFPPPQELSQ 605
>AL034380-7|CAI21622.1| 1175|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1175
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 4 ERPSPVPP---TRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHR 60
+ P+P P T P Q P S Q Y Q +P+ +TL Q+ Y + +
Sbjct: 146 QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAY--PQPQSQQ 203
Query: 61 PQMCTIGTNTDPPPNMLER 79
Q PPP L +
Sbjct: 204 SQQTAYSQQRFPPPQELSQ 222
>AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 4 ERPSPVPP---TRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHR 60
+ P+P P T P Q P S Q Y Q +P+ +TL Q+ Y + +
Sbjct: 146 QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAY--PQPQSQQ 203
Query: 61 PQMCTIGTNTDPPPNMLER 79
Q PPP L +
Sbjct: 204 SQQTAYSQQRFPPPQELSQ 222
>AK090939-1|BAC03552.1| 522|Homo sapiens protein ( Homo sapiens
cDNA FLJ33620 fis, clone BRAMY2020634. ).
Length = 522
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 27 TLQISYLQDEPEIRRSATLPAQSGYATKEDDRHRPQMCTIGTNTDPPPNMLERLRILFKR 86
+L I L++ PE+ + A L Y KE + RPQ+ P++ + L+ +F
Sbjct: 439 SLNIGALEELPEVNKPAFLLDPEKYFRKEPEEERPQIL-------EAPSLFKTLKAVFDE 491
Query: 87 QE---NETINHHRAGQFTIAPRETSFEVKE 113
+ E ++H R + +E S EVK+
Sbjct: 492 KNLFPKEILHHERKAKQLC--QEKSCEVKK 519
>AK000577-1|BAA91267.1| 405|Homo sapiens protein ( Homo sapiens
cDNA FLJ20570 fis, clone REC00956. ).
Length = 405
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 9 VPPTRD-LWPPPQQPLSISTLQISYLQDEPEIRRSAT---LPAQSGYATKEDD 57
+ PTRD PPPQ P S T Q DE R++AT + A YA +E D
Sbjct: 328 IVPTRDGTAPPPQSPGSPGTGQDEEWSDEESPRKAATGVRVRALYDYAGQEAD 380
>AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin
remodeling complex subunit OSA1 protein.
Length = 1999
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 4 ERPSPVPP---TRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHR 60
+ P+P P T P Q P S Q Y Q +P+ +TL Q+ Y + +
Sbjct: 243 QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAY--PQPQSQQ 300
Query: 61 PQMCTIGTNTDPPPNMLER 79
Q PPP L +
Sbjct: 301 SQQTAYSQQRFPPPQELSQ 319
>AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein
protein.
Length = 1685
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 4 ERPSPVPP---TRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHR 60
+ P+P P T P Q P S Q Y Q +P+ +TL Q+ Y + +
Sbjct: 146 QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAY--PQPQSQQ 203
Query: 61 PQMCTIGTNTDPPPNMLER 79
Q PPP L +
Sbjct: 204 SQQTAYSQQRFPPPQELSQ 222
>AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein
p270 protein.
Length = 1927
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 4 ERPSPVPP---TRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHR 60
+ P+P P T P Q P S Q Y Q +P+ +TL Q+ Y + +
Sbjct: 171 QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAY--PQPQSQQ 228
Query: 61 PQMCTIGTNTDPPPNMLER 79
Q PPP L +
Sbjct: 229 SQQTAYSQQRFPPPQELSQ 247
>AF242530-1|AAK29207.1| 424|Homo sapiens protein kinase C and
casein kinase substrate 3 protein.
Length = 424
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 9 VPPTRD-LWPPPQQPLSISTLQISYLQDEPEIRRSAT---LPAQSGYATKEDD 57
+ PTRD PPPQ P S T Q DE R++AT + A YA +E D
Sbjct: 328 IVPTRDGTAPPPQSPGSPGTGQDEEWSDEESPRKAATGVRVRALYDYAGQEAD 380
>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor
250a protein.
Length = 2285
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 4 ERPSPVPP---TRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHR 60
+ P+P P T P Q P S Q Y Q +P+ +TL Q+ Y + +
Sbjct: 529 QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAY--PQPQSQQ 586
Query: 61 PQMCTIGTNTDPPPNMLER 79
Q PPP L +
Sbjct: 587 SQQTAYSQQRFPPPQELSQ 605
>AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling
factor p250 protein.
Length = 1939
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 4 ERPSPVPP---TRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHR 60
+ P+P P T P Q P S Q Y Q +P+ +TL Q+ Y + +
Sbjct: 183 QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAY--PQPQSQQ 240
Query: 61 PQMCTIGTNTDPPPNMLER 79
Q PPP L +
Sbjct: 241 SQQTAYSQQRFPPPQELSQ 259
>AF149825-1|AAG31023.1| 424|Homo sapiens PACSIN3 protein.
Length = 424
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 9 VPPTRD-LWPPPQQPLSISTLQISYLQDEPEIRRSAT---LPAQSGYATKEDD 57
+ PTRD PPPQ P S T Q DE R++AT + A YA +E D
Sbjct: 328 IVPTRDGTAPPPQSPGSPGTGQDEEWSDEESPRKAATGVRVRALYDYAGQEAD 380
>AF130979-1|AAF04472.1| 424|Homo sapiens SH3 domain-containing
protein 6511 protein.
Length = 424
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 9 VPPTRD-LWPPPQQPLSISTLQISYLQDEPEIRRSAT---LPAQSGYATKEDD 57
+ PTRD PPPQ P S T Q DE R++AT + A YA +E D
Sbjct: 328 IVPTRDGTAPPPQSPGSPGTGQDEEWSDEESPRKAATGVRVRALYDYAGQEAD 380
>AB210022-1|BAE06104.1| 1374|Homo sapiens ARID1A variant protein
protein.
Length = 1374
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 4 ERPSPVPP---TRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHR 60
+ P+P P T P Q P S Q Y Q +P+ +TL Q+ Y + +
Sbjct: 183 QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAY--PQPQSQQ 240
Query: 61 PQMCTIGTNTDPPPNMLER 79
Q PPP L +
Sbjct: 241 SQQTAYSQQRFPPPQELSQ 259
>AB177856-1|BAD66834.1| 1484|Homo sapiens LAR splice variant 1
protein.
Length = 1484
Score = 29.9 bits (64), Expect = 6.8
Identities = 27/102 (26%), Positives = 37/102 (36%), Gaps = 3/102 (2%)
Query: 55 EDDRHRPQMCTIGTNTDPPPNMLERLRILFKRQENETINHHRAGQFTIAPRETSFEVKEE 114
E R +C G N DP + + + N I R+G I E S + K E
Sbjct: 167 EKARTATMLCAAGGNPDPEISWFKDFLPVDPATSNGRIKQLRSGALQIESSEESDQGKYE 226
Query: 115 SSASKKLSRIKKALANAKY---KIAPRSETIESPKIVYDTSK 153
A+ A AN ++APR SP I T +
Sbjct: 227 CVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSPTIQVKTQQ 268
>AB051293-1|BAB55599.1| 1208|Homo sapiens SWI related protein
protein.
Length = 1208
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 4 ERPSPVPP---TRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHR 60
+ P+P P T P Q P S Q Y Q +P+ +TL Q+ Y + +
Sbjct: 146 QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAY--PQPQSQQ 203
Query: 61 PQMCTIGTNTDPPPNMLER 79
Q PPP L +
Sbjct: 204 SQQTAYSQQRFPPPQELSQ 222
>AB024075-1|BAA83073.1| 1119|Homo sapiens B120 protein.
Length = 1119
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 4 ERPSPVPP---TRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHR 60
+ P+P P T P Q P S Q Y Q +P+ +TL Q+ Y + +
Sbjct: 146 QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAY--PQPQSQQ 203
Query: 61 PQMCTIGTNTDPPPNMLER 79
Q PPP L +
Sbjct: 204 SQQTAYSQQRFPPPQELSQ 222
>AB001895-1|BAA23269.1| 1142|Homo sapiens B120 protein.
Length = 1142
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 4 ERPSPVPP---TRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHR 60
+ P+P P T P Q P S Q Y Q +P+ +TL Q+ Y + +
Sbjct: 146 QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAY--PQPQSQQ 203
Query: 61 PQMCTIGTNTDPPPNMLER 79
Q PPP L +
Sbjct: 204 SQQTAYSQQRFPPPQELSQ 222
>L78838-3|AAL40088.1| 635|Homo sapiens T cell surface glycoprotein
CD6 isoform b protein.
Length = 635
Score = 29.5 bits (63), Expect = 9.0
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 18 PPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHRPQMCTIGTNTDPPP 74
PP P S+ + S+L+ P + ++T PA SG DD N PPP
Sbjct: 549 PPWNPQVFSSERSSFLEQPPNLELASTQPAFSG--PPADDSSSTSSGEWYQNFQPPP 603
>BC131772-1|AAI31773.1| 983|Homo sapiens PHC3 protein protein.
Length = 983
Score = 29.5 bits (63), Expect = 9.0
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 2 LGERPSPV--PPTRDLWPPPQ-QPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDR 58
L P P+ PP PP Q PL + ++Q LQ +PEI + Q+ ++E+
Sbjct: 492 LQSSPIPIASPPQMSTSPPAQIPPLPLQSMQS--LQVQPEILSQGQVLVQNALVSEEELP 549
Query: 59 HRPQMCTIGTNTDPPP 74
+ + T PPP
Sbjct: 550 AAEALVQLPFQTLPPP 565
>BC034028-1|AAH34028.1| 387|Homo sapiens SHANK-associated RH domain
interactor protein.
Length = 387
Score = 29.5 bits (63), Expect = 9.0
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 10 PPTRDLWPPPQQP--LSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHRPQMCTIG 67
P +L PPP P LS+ L Q + R AT+ Q+G + P+ C +
Sbjct: 84 PTQHELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEACPVS 143
Query: 68 TNTDPPPNMLE 78
+ P + L+
Sbjct: 144 LPSPPEASTLK 154
>BC025244-1|AAH25244.1| 326|Homo sapiens SHARPIN protein protein.
Length = 326
Score = 29.5 bits (63), Expect = 9.0
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 10 PPTRDLWPPPQQP--LSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHRPQMCTIG 67
P +L PPP P LS+ L Q + R AT+ Q+G + P+ C +
Sbjct: 84 PTQHELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEACPVS 143
Query: 68 TNTDPPPNMLE 78
+ P + L+
Sbjct: 144 LPSPPEASTLK 154
>BC012925-1|AAH12925.1| 721|Homo sapiens MLXIPL protein protein.
Length = 721
Score = 29.5 bits (63), Expect = 9.0
Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 9 VPPTRDLWPPPQQPLSISTLQISYLQDEPEIRR-SATLPAQSGYATKEDDRHRPQMCTIG 67
+PPT PP+ P +TL S P+ R S P+ S D P T+
Sbjct: 475 LPPT-PAPTPPRPPPGPATLAPSRPLLVPKAERLSPPAPSGSERRLSGDLSSMPGPGTLS 533
Query: 68 TNTDPPPNMLERLRILFKRQENETINHHRAGQ 99
PP +L R R + EN I H A Q
Sbjct: 534 VRVSPPQPILSRGRPDSNKTENRRITHISAEQ 565
>AL360169-1|CAI16559.1| 1543|Homo sapiens RP3-442A17.1 protein.
Length = 1543
Score = 29.5 bits (63), Expect = 9.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 10 PPTRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDR---HRPQMCTI 66
PP L PPPQ P+ +ST+ +D +++SA + E D PQ +
Sbjct: 770 PPPLSLPPPPQGPMQLSTVGHGD-RDHEHLQKSAKALRPTPQLAAEGDAVVFSAPQEVQV 828
Query: 67 GTNTDPPP 74
T +PPP
Sbjct: 829 -TKINPPP 835
>AL353800-1|CAI20993.1| 1543|Homo sapiens RP3-442A17.1 protein.
Length = 1543
Score = 29.5 bits (63), Expect = 9.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 10 PPTRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDR---HRPQMCTI 66
PP L PPPQ P+ +ST+ +D +++SA + E D PQ +
Sbjct: 770 PPPLSLPPPPQGPMQLSTVGHGD-RDHEHLQKSAKALRPTPQLAAEGDAVVFSAPQEVQV 828
Query: 67 GTNTDPPP 74
T +PPP
Sbjct: 829 -TKINPPP 835
>AK075518-1|BAC11666.1| 410|Homo sapiens protein ( Homo sapiens
cDNA PSEC0216 fis, clone HEMBA1004633. ).
Length = 410
Score = 29.5 bits (63), Expect = 9.0
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 10 PPTRDLWPPPQQP--LSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHRPQMCTIG 67
P +L PPP P LS+ L Q + R AT+ Q+G + P+ C +
Sbjct: 84 PTQHELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEACPVS 143
Query: 68 TNTDPPPNMLE 78
+ P + L+
Sbjct: 144 LPSPPEASTLK 154
>AJ320486-1|CAC86587.2| 983|Homo sapiens homolog of polyhomeotic 3
protein.
Length = 983
Score = 29.5 bits (63), Expect = 9.0
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 2 LGERPSPV--PPTRDLWPPPQ-QPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDR 58
L P P+ PP PP Q PL + ++Q LQ +PEI + Q+ ++E+
Sbjct: 492 LQSSPIPIASPPQMSTSPPAQIPPLPLQSMQS--LQVQPEILSQGQVLVQNALVSEEELP 549
Query: 59 HRPQMCTIGTNTDPPP 74
+ + T PPP
Sbjct: 550 AAEALVQLPFQTLPPP 565
>AJ279120-1|CAC21448.1| 2187|Homo sapiens TFNR protein.
Length = 2187
Score = 29.5 bits (63), Expect = 9.0
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 104 PRETS-FEVKEESSASKKLSRIKKALANAKYKIAPRSETIESPKIVYDTSKPGDRMKTTF 162
P+E E+K + R K LA A K ET ES K +Y+ +M+T
Sbjct: 1420 PQEQKPLEIKPAPFVRSRFKRPKPNLARAALK----RETTESEKYIYEKKSETKKMETIV 1475
Query: 163 GVRDNRRICKMPSRSE 178
+N + +PS+ +
Sbjct: 1476 MQENNEQTDTLPSQHD 1491
>AJ238520-1|CAC04245.1| 2254|Homo sapiens putative transcription
factor-like nuclear regulator protein.
Length = 2254
Score = 29.5 bits (63), Expect = 9.0
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 104 PRETS-FEVKEESSASKKLSRIKKALANAKYKIAPRSETIESPKIVYDTSKPGDRMKTTF 162
P+E E+K + R K LA A K ET ES K +Y+ +M+T
Sbjct: 1420 PQEQKPLEIKPAPFVRSRFKRPKPNLARAALK----RETTESEKYIYEKKSETKKMETIV 1475
Query: 163 GVRDNRRICKMPSRSE 178
+N + +PS+ +
Sbjct: 1476 MQENNEQTDTLPSQHD 1491
>AF444193-1|AAM51781.1| 983|Homo sapiens polyhomeotic 3 protein
protein.
Length = 983
Score = 29.5 bits (63), Expect = 9.0
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 2 LGERPSPV--PPTRDLWPPPQ-QPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDR 58
L P P+ PP PP Q PL + ++Q LQ +PEI + Q+ ++E+
Sbjct: 492 LQSSPIPIASPPQMSTSPPAQIPPLPLQSMQS--LQVQPEILSQGQVLVQNALVSEEELP 549
Query: 59 HRPQMCTIGTNTDPPP 74
+ + T PPP
Sbjct: 550 AAEALVQLPFQTLPPP 565
>AF380154-1|AAM46139.1| 964|Homo sapiens early development
regulator 3 protein.
Length = 964
Score = 29.5 bits (63), Expect = 9.0
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 2 LGERPSPV--PPTRDLWPPPQ-QPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDR 58
L P P+ PP PP Q PL + ++Q LQ +PEI + Q+ ++E+
Sbjct: 473 LQSSPIPIASPPQMSTSPPAQIPPLPLQSMQS--LQVQPEILSQGQVLVQNALVSEEELP 530
Query: 59 HRPQMCTIGTNTDPPP 74
+ + T PPP
Sbjct: 531 AAEALVQLPFQTLPPP 546
>AF245471-1|AAK20936.1| 833|Homo sapiens Mlx interactor beta
protein.
Length = 833
Score = 29.5 bits (63), Expect = 9.0
Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 9 VPPTRDLWPPPQQPLSISTLQISYLQDEPEIRR-SATLPAQSGYATKEDDRHRPQMCTIG 67
+PPT PP+ P +TL S P+ R S P+ S D P T+
Sbjct: 569 LPPT-PAPTPPRPPPGPATLAPSRPLLVPKAERLSPPAPSGSERRLSGDLSSMPGPGTLS 627
Query: 68 TNTDPPPNMLERLRILFKRQENETINHHRAGQ 99
PP +L R R + EN I H A Q
Sbjct: 628 VRVSPPQPILSRGRPDSNKTENRRITHISAEQ 659
>AF245470-1|AAK20935.1| 852|Homo sapiens Mlx interactor alpha
protein.
Length = 852
Score = 29.5 bits (63), Expect = 9.0
Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 9 VPPTRDLWPPPQQPLSISTLQISYLQDEPEIRR-SATLPAQSGYATKEDDRHRPQMCTIG 67
+PPT PP+ P +TL S P+ R S P+ S D P T+
Sbjct: 569 LPPT-PAPTPPRPPPGPATLAPSRPLLVPKAERLSPPAPSGSERRLSGDLSSMPGPGTLS 627
Query: 68 TNTDPPPNMLERLRILFKRQENETINHHRAGQ 99
PP +L R R + EN I H A Q
Sbjct: 628 VRVSPPQPILSRGRPDSNKTENRRITHISAEQ 659
>AF219946-1|AAF87975.1| 1544|Homo sapiens tubby super-family protein
protein.
Length = 1544
Score = 29.5 bits (63), Expect = 9.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 10 PPTRDLWPPPQQPLSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDR---HRPQMCTI 66
PP L PPPQ P+ +ST+ +D +++SA + E D PQ +
Sbjct: 771 PPPLSLPPPPQGPMQLSTVGHGD-RDHEHLQKSAKALRPTPQLAAEGDAVVFSAPQEVQV 829
Query: 67 GTNTDPPP 74
T +PPP
Sbjct: 830 -TKINPPP 836
>AF156673-1|AAF68176.1| 852|Homo sapiens putative hepatic
transcription factor protein.
Length = 852
Score = 29.5 bits (63), Expect = 9.0
Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 9 VPPTRDLWPPPQQPLSISTLQISYLQDEPEIRR-SATLPAQSGYATKEDDRHRPQMCTIG 67
+PPT PP+ P +TL S P+ R S P+ S D P T+
Sbjct: 569 LPPT-PAPTPPRPPPGPATLAPSRPLLVPKAERLSPPAPSGSERRLSGDLSSMPGPGTLS 627
Query: 68 TNTDPPPNMLERLRILFKRQENETINHHRAGQ 99
PP +L R R + EN I H A Q
Sbjct: 628 VRVSPPQPILSRGRPDSNKTENRRITHISAEQ 659
>AF156603-1|AAF68174.1| 852|Homo sapiens putative hepatic
transcription factor protein.
Length = 852
Score = 29.5 bits (63), Expect = 9.0
Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 9 VPPTRDLWPPPQQPLSISTLQISYLQDEPEIRR-SATLPAQSGYATKEDDRHRPQMCTIG 67
+PPT PP+ P +TL S P+ R S P+ S D P T+
Sbjct: 569 LPPT-PAPTPPRPPPGPATLAPSRPLLVPKAERLSPPAPSGSERRLSGDLSSMPGPGTLS 627
Query: 68 TNTDPPPNMLERLRILFKRQENETINHHRAGQ 99
PP +L R R + EN I H A Q
Sbjct: 628 VRVSPPQPILSRGRPDSNKTENRRITHISAEQ 659
>AB052764-1|BAC53797.1| 345|Homo sapiens shank-interacting
protein-like 1 alpha protein.
Length = 345
Score = 29.5 bits (63), Expect = 9.0
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 10 PPTRDLWPPPQQP--LSISTLQISYLQDEPEIRRSATLPAQSGYATKEDDRHRPQMCTIG 67
P +L PPP P LS+ L Q + R AT+ Q+G + P+ C +
Sbjct: 84 PTQHELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEACPVS 143
Query: 68 TNTDPPPNMLE 78
+ P + L+
Sbjct: 144 LPSPPEASTLK 154
>AB051514-1|BAB21818.1| 1130|Homo sapiens KIAA1727 protein
protein.
Length = 1130
Score = 29.5 bits (63), Expect = 9.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 1 MLGERPSPVPPTRDLWPPPQQPLSIS 26
M+G+ P P PP PPP P S S
Sbjct: 12 MIGQTPPPAPPPPPPPPPPSPPCSCS 37
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.316 0.131 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,930,082
Number of Sequences: 224733
Number of extensions: 1379610
Number of successful extensions: 5582
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 5567
Number of HSP's gapped (non-prelim): 77
length of query: 212
length of database: 73,234,838
effective HSP length: 87
effective length of query: 125
effective length of database: 53,683,067
effective search space: 6710383375
effective search space used: 6710383375
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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