GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005360-TA|BGIBMGA005360-PA|IPR007255|Dor1-like protein
         (517 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    29   0.12 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   2.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   6.1  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    23   8.1  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 28.7 bits (61), Expect = 0.12
 Identities = 16/51 (31%), Positives = 27/51 (52%)

Query: 16  SPTENVIFFSEVSDYIKKLGSQNWDYIRKEPERLTEEMKHLTEQTQELAFT 66
           +P +  + F  + D  K+LG Q   +I +  E L +E++   E+T  L FT
Sbjct: 184 NPAKVKLRFENLFDGNKELGEQMNRFINENSELLFKELQAAYEETFSLVFT 234


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 181 LRRANTVYKSTDEEENSMQSIIGNKNTSSDGL 212
           LR   ++++ TD+ +NS    I + N    G+
Sbjct: 386 LRYPRSIFRQTDDHQNSPSIFISDDNQKLTGI 417


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 391 YYPLAEYCNGMLTVLNSLRVTAPLNIAKEV 420
           YYP   + NG+         T PL++ K V
Sbjct: 294 YYPTMRFRNGLAFPQRETGATVPLHMQKYV 323


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 240 VLRRIVELHRIHLFNVLTQHKSIFLSDAQESKARDDE 276
           +   I++   +H F      +  F SD  ES+   DE
Sbjct: 287 IFATIIQFAVVHYFTKYGSGECYFSSDLSESETSSDE 323


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.133    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,421
Number of Sequences: 429
Number of extensions: 6185
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 4
length of query: 517
length of database: 140,377
effective HSP length: 61
effective length of query: 456
effective length of database: 114,208
effective search space: 52078848
effective search space used: 52078848
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)