Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005358-TA|BGIBMGA005358-PA|IPR011047|Quinonprotein
alcohol dehydrogenase-like, IPR011046|WD40-like, IPR011009|Protein
kinase-like, IPR001680|WD-40 repeat, IPR004119|Protein of unknown
function DUF227
(1290 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 62 6e-10
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 37 0.021
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 35 0.064
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 34 0.15
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 33 0.26
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 33 0.34
SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase |Schizos... 32 0.45
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 32 0.60
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 31 1.0
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 31 1.0
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 30 2.4
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 29 3.2
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 29 3.2
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 29 3.2
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 29 3.2
SPAC20G4.07c |sts1|erg4|C-24|Schizosaccharomyces pombe|chr 1|||M... 29 4.2
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 29 5.6
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 29 5.6
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 29 5.6
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 29 5.6
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 29 5.6
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 29 5.6
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 29 5.6
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 29 5.6
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 28 7.4
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 28 7.4
SPCC126.07c |||human CTD-binding SR-like protein rA9 homolog|Sch... 28 7.4
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 28 7.4
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 28 7.4
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 28 7.4
SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces pomb... 28 9.7
SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces... 28 9.7
SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces pomb... 28 9.7
SPBC215.03c |csn1||COP9/signalosome complex subunit Csn1|Schizos... 28 9.7
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 28 9.7
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 61.7 bits (143), Expect = 6e-10
Identities = 113/539 (20%), Positives = 220/539 (40%), Gaps = 62/539 (11%)
Query: 20 GRSIIERRPIFSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEF---PQN 76
GR + + ++S D + V + + + ++++ T + + + + + + P+N
Sbjct: 24 GRLVSKIPAVYSNDNKFVFLTYDTFIGIFSLITGDCINRIFFPNNLANLLPVAVLLSPEN 83
Query: 77 EDYNLYGCSKSGLVTIWTWDKGAVLRDTHLQIPANLIVLTFDLINE-NECFITGAGGSYS 135
+ LY +SG V + W +LR + + + L+ + + + S
Sbjct: 84 A-FELYVIFQSGYVCVHDWSNSELLRTMEISTRVHAASFSGKLLFAVTDTPASDSASSQD 142
Query: 136 KNIHYA---SYSIKTGELLCEYGTRIWNTQPLIKVALGWNNDDRFAAICNGTKSLYIQSI 192
+ YA S S + +L +N + +L NN A I K+++ ++
Sbjct: 143 RFTLYALSPSTSKEGSSILIPTFVSKFNEFLALDSSLRDNNLATVAVITTD-KAIFSLNV 201
Query: 193 YNQNTSAIFYNFSE-YRIVSVACHKSI--NTLAVTDTLGRATVIRGNLYDIRNAA--KEV 247
+ S + + + + + S+ + AV+D G+ VI DI N ++
Sbjct: 202 PKKKRSQRWIHREHLFNMPQKLTNVSLCGSACAVSDDEGKIHVIN----DISNEKFNPQI 257
Query: 248 FHWHCLPPMALCFSMQGNYLYSGGVESVLVKWTLGSLAYKAAEKSFLPRLPGLVRYITT- 306
HWH P L +++ G YL SGG E VLV W + + + + FLPRL + I T
Sbjct: 258 LHWHANPLNGLSWALNGEYLLSGGQEGVLVLWQM-----ETSHRQFLPRLGSSILSIATS 312
Query: 307 -NNTHIAITLTNNSIVIANA-----QMHAVG------TIAECGGVSPTARTLEPVLIYQ- 353
++ A+ L +NS+V+ A Q+H G G T++ L+ ++ +
Sbjct: 313 HDSDSYALHLGDNSLVVIRAVDLAEQIHVSGINSFESKYLTSTGPKNTSKQLQGLVQFSS 372
Query: 354 -HKLGALLMHGPT---GH---LQLYSTTSNKVLYNID-----ITGQNRIQPERWNLMPLQ 401
G LL+ + GH +Q Y T + + + + ++ + +L
Sbjct: 373 VSPNGELLLMSSSSFNGHSVSVQEYDLTKDSTIRKFEAARYSYSSVSKNSDDATSLDNGH 432
Query: 402 TEITCASLSPNGQWLVTSEYRNDGFMYPEER------LKFWTINQNNKQKSPFLMNTCIN 455
+ S NG ++ T + + ++R LKFW ++ QK+ LM T I+
Sbjct: 433 VGSVAVTSSRNGLYIATIDTWCTNIIDEQQRNVKQTALKFWQF--DSVQKTWVLM-TRID 489
Query: 456 LSHGGCRVV-ALAFSYDGKLCVSSGLDQKFRVWEFDCSNNKRGIWVCLTACYYSSGVAQ 513
HG VV AL ++ G D R+W ++ W C+ ++++ +Q
Sbjct: 490 NPHGNLEVVTALKMMTSSNRFITVGTDATLRIWALLPGSS---AWKCVAIHHFANTHSQ 545
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 632 AHYLVCTTESCLAVWSLLSLTVKW-LVQLNPMALCSDLLSNKMAVVTSNND---IHIFTP 687
A + V ++ L VW+++S +V+W L L S N AV+ N+ + IF+P
Sbjct: 605 AEHCVIISQRRLLVWNVISASVQWTLASKFTGLLASSSSGNDFAVIDFNSSYSRLIIFSP 664
Query: 688 HSSK 691
S K
Sbjct: 665 DSPK 668
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 36.7 bits (81), Expect = 0.021
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 463 VVALAFSYDGKLCVSSGLDQKFRVWEFDCSNN 494
V ++AFS DGK VS LD ++WE C +N
Sbjct: 461 VYSVAFSPDGKYLVSGSLDNTIKLWELQCVSN 492
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 459 GGCRVVALAFSYDGKLCVSSGLDQKFRVWE 488
G V ++AFS DGK + DQ+ R+W+
Sbjct: 333 GDLYVRSVAFSPDGKYLATGVEDQQIRIWD 362
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 35.1 bits (77), Expect = 0.064
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 433 LKFWTINQNNKQKSPFLMNTCINLSHGGCRVVALAFSYDGKLCVSSGLDQKFRVWEFDCS 492
+K W + +N+ S F+ ++ I V +L+FSYD K+ VS G D W+
Sbjct: 553 IKVWDLRSSNQHVS-FVKHSSI--------VYSLSFSYDNKILVSGGADTDVNFWDLTYR 603
Query: 493 NN 494
NN
Sbjct: 604 NN 605
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 237 LYDIRNAAK-EVFHWHCLPPMALCFSMQGNYLYSGGVESVLVKWTLGS 283
++D+R VF+ H P ALC S G L S ++ W L S
Sbjct: 513 MWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRS 560
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 33.9 bits (74), Expect = 0.15
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Query: 363 GPTGHLQLYSTTSNKVLYNIDITGQNRIQPERWNLMPLQT-EITCASLSPNGQWLVT-SE 420
G G ++++ST + + + +N P++ M T +T SPNGQ+L + S+
Sbjct: 37 GLDGTIRIWSTEA--INRENENENENEDLPKQLCCMSTHTGTVTSVRFSPNGQYLASGSD 94
Query: 421 YRNDGFMYPEERLKFWTINQNNKQKSPFLMNTCINLSHGGCRVVALAFSYDGKLCVSSGL 480
R + EE + + +K + L + L +SYD +L VS GL
Sbjct: 95 DRVVIIWHKEEAIPGLGSTFGSGEKHTENWRSYRRLLGHDNDIQDLCWSYDSQLVVSVGL 154
Query: 481 DQKFRVW 487
D VW
Sbjct: 155 DSSIIVW 161
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 433 LKFWTINQNNKQKSPFLMNTCINLSHGGCRVVALAFSYDGKLCVSSGLDQKFRVWEFDCS 492
++FW + ++ K P + +L G + L+FS DG +S G D RVW+ S
Sbjct: 275 IQFW--QKGSRTKRPVMKIKDAHLPQQG--ISCLSFSQDGNYLLSRGEDNALRVWDLRNS 330
Query: 493 N 493
N
Sbjct: 331 N 331
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 448 FLMNTCINLSHGGCRVVALAFSYDGKLCVSSGLDQKFRVWEFDCSNN 494
+L + N+SH G V LA++ D + S G D + RVW + N
Sbjct: 235 YLPSNQTNISHYGT-VNGLAWTSDARYLASCGTDDRIRVWNMESGRN 280
>SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 891
Score = 32.3 bits (70), Expect = 0.45
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
Query: 1137 LVDFQTVLYCSPMLDLSSLIFFNTTRSDRYNYTDELIDLYYDTISEELLIKD--IQINEI 1194
L+ FQT Y L S + + + DR D ID+Y I + ++ D ++ E
Sbjct: 344 LIGFQTEEYKRHFLQSCSRVLYAESTFDRILLDDRYIDVYAHPIGADPVLVDKWLENPET 403
Query: 1195 MD-KDTLIKAY-NDSIMFGITQAALIVPIVSMTEE--KRKQIFYDPENCKKANVVSRGEY 1250
++ K+ L K Y N +I G + + PI + E+ +Q YD +K ++ +
Sbjct: 404 LEVKEVLEKRYANLNIFVGCDK---MDPIRGIREKLLAFEQFLYDNPEYQKNTILIQTST 460
Query: 1251 FIEIAKE 1257
F E KE
Sbjct: 461 FTEEQKE 467
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 508 SSGVAQYLSQGILNNFKIGHSEPSDDFTQFPYMKE 542
SSGV + ++ L N IG SE D T PY+ E
Sbjct: 44 SSGVLETVNYQQLQNRNIGQSESPSDLTNLPYLNE 78
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 1006 ENMPLEMLRAAVKSLARFHAESYIYE--ENKSKELGRPYRIWEDYSEYLQEP 1055
E +P R A K + + I E +KS E GR + D+SE L++P
Sbjct: 45 EELPFTKKRRATKHFLKMEVSAKISEPPSSKSVEFGRHLNMRHDFSELLEQP 96
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 462 RVVALAFSYDGKLCVSSGLDQKFRVWEFDCSNNKRGIWVCLTA 504
+V L ++YDG S G D +++ D NK+ W+ L A
Sbjct: 291 QVCGLEWNYDGTQFASGGNDNLVCIFDIDSLENKKFYWIHLAA 333
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 29.9 bits (64), Expect = 2.4
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 15/111 (13%)
Query: 30 FSPDGESVAVIVEDIVH-VYNVQTCELVRTLESETPIDGFVG-----IEFPQNEDYNLYG 83
FS D +A D V+++ T + + L +DG+ + F + YNL
Sbjct: 188 FSKDDSLLATSSGDQTSKVFDLSTQQCITRL-GRRGVDGYHSHSVKQVNFCNDSPYNLVS 246
Query: 84 CSKSGLVTIWTW-DKGAVLRDTHLQIPANLIVLTFDLINEN---ECFITGA 130
CS+ G + W G + H Q P VL +EN +C IT A
Sbjct: 247 CSRDGSIIFWDMRTHGITIDGEHFQKP----VLRIRKAHENSGRDCSITSA 293
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 454 INLSHGGCRVVALAFSYDGKLCVSSGLDQKFRVWEFDCSNNKRGIW 499
+NL V+++ SYD KL V+ D+ ++W D + + I+
Sbjct: 570 LNLYGHKLPVLSMDISYDSKLLVTCSADKNVKIWGLDFGDCHKSIF 615
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 462 RVVALAFSYDGKLCVSSGLDQKFRVWE 488
RV ALA +DG L VS G D VW+
Sbjct: 593 RVWALASRFDGSLLVSGGADAVVSVWK 619
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 463 VVALAFSYDGKLCVSSGLDQKFRVWEFDCSNN 494
V ++AFS D + +S LD+ +VWE + +
Sbjct: 487 VYSIAFSPDSSILLSGSLDKTIKVWELQATRS 518
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 776 DTLASDVDATSSAAISNISMAPPYMTPPVSLLCTTFLQE 814
D+ + D SA+++++ +AP Y++ PVSL +F E
Sbjct: 495 DSYLTKNDEEDSASLASLKVAPKYVSHPVSLSSNSFHTE 533
>SPAC20G4.07c |sts1|erg4|C-24|Schizosaccharomyces pombe|chr
1|||Manual
Length = 453
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 10/110 (9%)
Query: 598 LTLWDTYLCTLRTSLSHPALRPKGVDVKFGNNDAAHYLVCTTESCLAVWS----LLSLTV 653
L W + L+ P +R +G+ +K NN+ YL C A+WS ++ L V
Sbjct: 78 LVFWSFCIVQAVMYLTLPGVRTQGLPLKHRNNERLPYL------CNAIWSFYTTIVILAV 131
Query: 654 KWLVQLNPMALCSDLLSNKMAVVTSNNDIHIFTPHSSKPLMSQQRVSDPN 703
+ + P+ D+ M+V + F ++ L + P+
Sbjct: 132 LHVTHVFPITTFIDMFGPLMSVAIITAFVCTFVLYTGTLLFGDRLFDKPH 181
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 453 CINLSHGGC-RVVALAFSYDGKLCVSSGLDQKFRVWEFD 490
C+++ G RV ++ + + C+S+G D K R+W +
Sbjct: 609 CLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLE 647
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/77 (22%), Positives = 31/77 (40%)
Query: 261 SMQGNYLYSGGVESVLVKWTLGSLAYKAAEKSFLPRLPGLVRYITTNNTHIAITLTNNSI 320
S+Q Y Y G + + ++K L+Y A K + Y+ +N + I L
Sbjct: 2000 SIQRLYCYEGPINNYMIKSWGSRLSYIYAFKPLICSCVPATEYLESNIMMVGIPLKGLIF 2059
Query: 321 VIANAQMHAVGTIAECG 337
+ N+ + + I G
Sbjct: 2060 AVVNSDTNTLAPIGSSG 2076
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 1110 YRNVVAHRDLWTNNILLKKCEDSYHAVLVDF 1140
++N + HRDL N+LL +DS L+DF
Sbjct: 167 HKNFIVHRDLKIENVLL--TQDSRQVKLIDF 195
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Query: 73 FPQNEDYNLYGCSKSGLVTIWTWDKGAVLRDTHLQIPANLIVLTFDLINENECFITGAGG 132
F Q ED L ++ +W W + L A V L+NE++ + G
Sbjct: 998 FHQFED-QLITLGDKDIIQVWDWRRNRCLNSFKTSASATTNVTDMQLLNEDDVALLMTGS 1056
Query: 133 SYSKNIHYASYSIKTGELLCEYGT 156
S Y Y + EL+ + +
Sbjct: 1057 SDGTIKLYRDYENEKVELVTSWNS 1080
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 431 ERLKFWTINQNNKQKSPFLMNTCINLSHGGCRVVALAFSYDGKLCVSSGLDQKFRVWEFD 490
+++ W N NN S ++T + G C L FS DG+ S D+ R+W +
Sbjct: 168 QQIYVWKFNYNNPP-SCVSIDTYLVGHEGAC--FDLKFSSDGRYLCSVSEDRTLRLWSIE 224
Query: 491 CS 492
S
Sbjct: 225 SS 226
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 185 KSLYIQSIYNQNTSAIFYNFSEYRIVSVAC---HKSINTLAVTDT 226
+ Y QS+YN + Y + + +V + C HKSI + VT T
Sbjct: 97 RRFYEQSVYNAKNGMLVYVNAIFAVVGIYCSVVHKSILQIGVTLT 141
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 28.7 bits (61), Expect = 5.6
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 401 QTEITCASLSPNGQWLVTS 419
+ +TC S+SPN +W+ TS
Sbjct: 54 EKSVTCVSVSPNKRWIATS 72
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 28.7 bits (61), Expect = 5.6
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 463 VVALAFSYDGKLCVSSGLDQKFRVWE 488
+VA+ +S+DG + G+D + R+W+
Sbjct: 107 IVAIDWSFDGTYIATGGMDSQVRLWK 132
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 439 NQNNKQKSPFLMNTCINLSHGGCRVVALAFSYDGKLCVSSGLDQKFRVWE 488
NQ + K P L N NL+ RV+ L+ S DG+ V+ D+ R W+
Sbjct: 359 NQVSLWKYPSLKNIA-NLTAHTNRVLYLSMSPDGQSIVTGAGDETLRFWK 407
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 972 EASRKWRPKLLFIKEDIFVFENITTIGYSMPDHKENMPLEMLRAAVKSLARFHAESYIYE 1031
EA+ K + +L KE++ +I+ I + + KE LE A+ + L R H E +Y
Sbjct: 207 EAAEKAKQDILETKENLSSELSISNI--QLKEAKER--LEAANASYQKLRREHKELALYH 262
Query: 1032 ENKSKEL 1038
E K+ L
Sbjct: 263 EKKTHSL 269
>SPCC126.07c |||human CTD-binding SR-like protein rA9
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 571
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/105 (21%), Positives = 44/105 (41%)
Query: 250 WHCLPPMALCFSMQGNYLYSGGVESVLVKWTLGSLAYKAAEKSFLPRLPGLVRYITTNNT 309
W L + MQ L + V S L++ + S ++ + + P +V+ TN +
Sbjct: 224 WDALNSDLSYYGMQQERLPARDVSSELLRRRIESARLRSNQLNEPVEQPRVVQTPVTNAS 283
Query: 310 HIAITLTNNSIVIANAQMHAVGTIAECGGVSPTARTLEPVLIYQH 354
+ I+ AN+ +H+V T A P++ + I +H
Sbjct: 284 EQQAWNDFDEILHANSSVHSVATEATISNPRPSSGRFQQTPIEEH 328
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 248 FHWHCLPPMALCFSMQGNYLYSGGVESVLVKWTL 281
F H LCFS +GN L+S ++ + W L
Sbjct: 377 FTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDL 410
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 394 RWNLMPLQTEITCASLSPNGQWLVTSEYRNDGFMYPEERLKFWTINQNNKQKSPFLMNTC 453
R N + +++T SP+ + ++++ GF P+ L W+ + + K
Sbjct: 383 RVNTVDAGSQVTSLIWSPHSKEIMSTH----GF--PDNNLSIWSYSSSGLTKQ------- 429
Query: 454 INLSHGGCRVVALAFSYDGKLCVSSGLDQKFRVWE-FDCSNNKRGIWVCLT 503
+++ RV+ A S DG++ ++ D+ + W +D + KR I + T
Sbjct: 430 VDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPIPITKT 480
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 1225 TEEKRKQIFYD--PENCKKANVVSRGEYFIEIAKEDASY 1261
T+E R FY+ P++ V RGE+++ I EDAS+
Sbjct: 13 TDEARMFNFYEKMPKDTNTVRVFDRGEFYVAIG-EDASF 50
>SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1095
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 801 TPPVSLLCTTFLQELAGQEEPKDDEVTDLEEKMNVDQSSDEEDD 844
T + L C + ++AG E DE +L+E +N D +E D
Sbjct: 306 TDQLVLQCLLLMTDVAGDPE---DEAEELQEWLNTDDLDQDESD 346
>SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 811 FLQELAGQEEPKDDEVTDLEEKMNVDQSSDEEDDVIKLNGP 851
+ E +E +DE DLEE + DEE D K P
Sbjct: 196 YFTEAMTEEASDEDESVDLEEDEEEEDEEDEEGDEEKQEPP 236
>SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 812 LQELAGQEEPKD--DEVTDLEEKMNVDQSSDEEDDVI 846
+ EL G E+ +D D+VT +EE+ D S EE D I
Sbjct: 732 MAELRGDEDDQDENDQVTKVEEEHMEDDDSVEEFDPI 768
>SPBC215.03c |csn1||COP9/signalosome complex subunit
Csn1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 422
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 948 LKELNFFKKEYVMLSKLFKD-FRSIEASRKWRPKLLFIKEDIFVFENITTIGYSMPDHKE 1006
LKE + + Y L + F+D F + + +W + F ++ +N+ + + +K
Sbjct: 50 LKEKTYNLELYQSLFEEFQDCFENEQLDVEWVESVTFHRK-----QNLEQLRRELKAYKN 104
Query: 1007 NMPLEMLRAAVKSLARFHAE 1026
N+ E +RAA LA F A+
Sbjct: 105 NLIRESIRAAQLDLASFFAD 124
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 463 VVALAFSYDGKLCVSSGLDQKFRVWEFDCSNN 494
V A+ S DG LC S G D +W+ + S +
Sbjct: 195 VSAVTISPDGSLCASGGRDGTLMLWDLNESTH 226
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,272,165
Number of Sequences: 5004
Number of extensions: 282746
Number of successful extensions: 924
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 852
Number of HSP's gapped (non-prelim): 87
length of query: 1290
length of database: 2,362,478
effective HSP length: 81
effective length of query: 1209
effective length of database: 1,957,154
effective search space: 2366199186
effective search space used: 2366199186
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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