Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005357-TA|BGIBMGA005357-PA|IPR000504|RNA-binding region
RNP-1 (RNA recognition motif), IPR002343|Paraneoplastic
encephalomyelitis antigen
(356 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 200 2e-51
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 196 2e-50
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 85 1e-16
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 85 1e-16
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 83 2e-16
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 81 9e-16
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 81 9e-16
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 64 1e-10
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 64 1e-10
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 63 3e-10
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 63 3e-10
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 62 6e-10
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 62 8e-10
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 62 8e-10
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 62 8e-10
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 62 8e-10
Z78536-3|CAB01717.1| 270|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 58 1e-08
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 58 1e-08
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 56 3e-08
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 56 3e-08
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 56 3e-08
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 56 5e-08
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 56 5e-08
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 56 5e-08
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 53 4e-07
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 50 3e-06
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 50 3e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 50 3e-06
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 49 6e-06
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 49 6e-06
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 48 8e-06
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 48 8e-06
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 47 2e-05
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 47 2e-05
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 45 7e-05
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 45 7e-05
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 45 7e-05
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 45 9e-05
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 45 9e-05
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 43 4e-04
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 43 4e-04
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 43 4e-04
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 43 4e-04
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 42 5e-04
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 41 0.002
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 41 0.002
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 41 0.002
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 41 0.002
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 40 0.002
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 40 0.002
AL117204-23|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 40 0.003
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 40 0.004
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 40 0.004
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 39 0.005
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 39 0.005
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 38 0.008
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 38 0.008
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 38 0.008
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z68507-6|CAA92829.1| 240|Caenorhabditis elegans Hypothetical pr... 38 0.014
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 37 0.019
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 37 0.019
Z32683-13|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 37 0.025
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 37 0.025
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 36 0.044
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 36 0.058
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 35 0.10
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 35 0.10
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 34 0.13
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 34 0.13
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 34 0.13
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 33 0.41
Z66521-9|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 33 0.41
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 32 0.71
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 32 0.71
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 31 1.2
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 31 1.2
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 31 1.2
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 31 1.2
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 31 1.2
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 31 1.7
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 30 2.2
Z69884-10|CAA93753.1| 400|Caenorhabditis elegans Hypothetical p... 29 6.7
Z69883-7|CAA93745.1| 400|Caenorhabditis elegans Hypothetical pr... 29 6.7
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 29 6.7
U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family... 29 6.7
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 200 bits (487), Expect = 2e-51
Identities = 110/188 (58%), Positives = 127/188 (67%), Gaps = 12/188 (6%)
Query: 61 LSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEA 120
LS TNLYIRGL PNT D L +MC YG+I STKAI+DK TN CKGYGFVDFE+ +A A
Sbjct: 78 LSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAA 137
Query: 121 AVKGLQAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQV 180
AV GL +GVQAQMAK+ +QQEQDPTNLY+ANLP F E ++ L KFG V
Sbjct: 138 AVDGLNTEGVQAQMAKL---------QQQEQDPTNLYIANLPLDFTEQMLETELNKFGMV 188
Query: 181 VSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPG-AKE--PLLVKFADGGNKK 237
+STRILR QS+GVGFARM+S+EKCE II NG +KE LL+K AD G K
Sbjct: 189 ISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNGGRFDTMSKEGPALLIKQADTGRKS 248
Query: 238 KSSYKQNE 245
K S E
Sbjct: 249 KHSMNNPE 256
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 196 bits (478), Expect = 2e-50
Identities = 107/180 (59%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 62 SRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAA 121
S TNLYIRGL PNT D L +MC YG+I STKAI+DK TN CKGYGFVDFE+ +A AA
Sbjct: 105 SSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAA 164
Query: 122 VKGLQAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVV 181
V GL +GVQAQMAK+ +QQEQDPTNLY+ANLP F E ++ L KFG V+
Sbjct: 165 VDGLNTEGVQAQMAKL---------QQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVI 215
Query: 182 STRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPG-AKE--PLLVKFADGGNKKK 238
STRILR QS+GVGFARM+S+EKCE II NG +KE LL+K AD G K K
Sbjct: 216 STRILRTPDNQSRGVGFARMDSKEKCEVIISALNGGRFDTMSKEGPALLIKQADTGRKSK 275
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 93.5 bits (222), Expect = 2e-19
Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 5/172 (2%)
Query: 62 SRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAA 121
S+TNL I L T +++ + G I S K + DK T + GYGFV++ A A
Sbjct: 40 SKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRA 99
Query: 122 VKGLQAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVV 181
V G++ Q + + + R N Q + +NLY++ +P ++++ + FGQ++
Sbjct: 100 VSSF--NGLRLQNKTIKVSYARPSNDQIK--GSNLYVSGIPKSMTLHELESIFRPFGQII 155
Query: 182 STRILRD-THGQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFAD 232
++RIL D G SKGVGF R + +++ + I+ NG+ G E + VKFA+
Sbjct: 156 TSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSIPSGCSEQITVKFAN 207
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 59 EQLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASA 118
+Q+ +NLY+ G+ + T +L + + +G II+++ + D T KG GFV F+ A
Sbjct: 123 DQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEA 182
Query: 119 EAAVKGL 125
+ A+K L
Sbjct: 183 DVAIKTL 189
Score = 41.9 bits (94), Expect = 7e-04
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
L++ LS +T D L Q+ +G+I++ K + D T +CKGY FV A A+ L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDL-TQQCKGYAFVSMSNYTEAYNAMLSL 434
Query: 126 QAKGVQAQMAKV 137
+ + +V
Sbjct: 435 NGTNLAGKTLQV 446
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 151 QDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRD-THGQSKGVGFARMESREKCEQ 209
+ TNL + LP + +V L G++ S +++RD GQS G GF E +
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALR 98
Query: 210 IIQMFNG 216
+ FNG
Sbjct: 99 AVSSFNG 105
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 156 LYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFN 215
L++ NL + + QL ++FG +V+ +ILRD Q KG F M + + + N
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLN 435
Query: 216 GNPIPG 221
G + G
Sbjct: 436 GTNLAG 441
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 84.6 bits (200), Expect = 1e-16
Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 8/193 (4%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
N++I+ L +K + ++G+I+S K +D++ KGYGFV FET +A+ A++
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETEEAAQNAIQK 116
Query: 125 LQAKGVQAQMAKVGIWFLRRLNRQQE-----QDPTNLYMANLPPHFKENDVDQLLAKFGQ 179
+ + + VG F R R +E + TN+Y+ N H+ + +++L AKFG
Sbjct: 117 VNGMLLAGKKVFVGK-FQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGN 175
Query: 180 VVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKS 239
+ S ++ G+SKG GF + E+ E +Q + + I G L V A +++ +
Sbjct: 176 ITSCEVM-TVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHA 234
Query: 240 SYKQNESNGRTWR 252
K+ + R
Sbjct: 235 ELKKKHEQHKAER 247
Score = 61.7 bits (143), Expect = 8e-10
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 20/184 (10%)
Query: 64 TNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVK 123
TN+Y++ + + L ++ +G+I S + + + K KG+GFV F AE AV+
Sbjct: 150 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEG--KSKGFGFVAFANPEEAETAVQ 207
Query: 124 GLQAKGVQAQMAKVGIWFLRRLN----------------RQQEQDPTNLYMANLPPHFKE 167
L ++ K+ + ++ + R Q+ NLY+ NL +
Sbjct: 208 ALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDD 267
Query: 168 NDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLL 227
+ + + +G + S +++ D +G+SKG GF E E+ + N + +PL
Sbjct: 268 DGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMV--CSKPLY 325
Query: 228 VKFA 231
V A
Sbjct: 326 VAIA 329
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 58 VEQLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIAS 117
+++ NLY++ L D L + + YG+I S K + D+N + KG+GFV FE
Sbjct: 248 MQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEE 306
Query: 118 AEAAVKGLQAKGVQAQMAKVGI 139
A +AV + +K V ++ V I
Sbjct: 307 ATSAVTEMNSKMVCSKPLYVAI 328
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 116 ASAEAAVKGLQAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLA 175
A AE A+ + + + + ++ +W +R + N+++ NL + +
Sbjct: 21 ADAERAMDTMNFEALHGKPMRI-MWS-QRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFS 78
Query: 176 KFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAK 223
FG ++S ++ D G SKG GF E+ E + IQ NG + G K
Sbjct: 79 LFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKK 126
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 84.6 bits (200), Expect = 1e-16
Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 8/193 (4%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
N++I+ L +K + ++G+I+S K +D++ KGYGFV FET +A+ A++
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETEEAAQNAIQK 179
Query: 125 LQAKGVQAQMAKVGIWFLRRLNRQQE-----QDPTNLYMANLPPHFKENDVDQLLAKFGQ 179
+ + + VG F R R +E + TN+Y+ N H+ + +++L AKFG
Sbjct: 180 VNGMLLAGKKVFVGK-FQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGN 238
Query: 180 VVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKS 239
+ S ++ G+SKG GF + E+ E +Q + + I G L V A +++ +
Sbjct: 239 ITSCEVM-TVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHA 297
Query: 240 SYKQNESNGRTWR 252
K+ + R
Sbjct: 298 ELKKKHEQHKAER 310
Score = 71.3 bits (167), Expect = 1e-12
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
+LY+ L P+ + L + G ++S + D T GY +V+F+ A AE A+
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 125 LQAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTR 184
+ + + + ++ +W +R + N+++ NL + + FG ++S +
Sbjct: 93 MNFEALHGKPMRI-MWS-QRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCK 150
Query: 185 ILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAK 223
+ D G SKG GF E+ E + IQ NG + G K
Sbjct: 151 VAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKK 189
Score = 61.7 bits (143), Expect = 8e-10
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 20/184 (10%)
Query: 64 TNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVK 123
TN+Y++ + + L ++ +G+I S + + + K KG+GFV F AE AV+
Sbjct: 213 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEG--KSKGFGFVAFANPEEAETAVQ 270
Query: 124 GLQAKGVQAQMAKVGIWFLRRLN----------------RQQEQDPTNLYMANLPPHFKE 167
L ++ K+ + ++ + R Q+ NLY+ NL +
Sbjct: 271 ALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDD 330
Query: 168 NDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLL 227
+ + + +G + S +++ D +G+SKG GF E E+ + N + +PL
Sbjct: 331 DGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMV--CSKPLY 388
Query: 228 VKFA 231
V A
Sbjct: 389 VAIA 392
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 58 VEQLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIAS 117
+++ NLY++ L D L + + YG+I S K + D+N + KG+GFV FE
Sbjct: 311 MQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEE 369
Query: 118 AEAAVKGLQAKGVQAQMAKVGI 139
A +AV + +K V ++ V I
Sbjct: 370 ATSAVTEMNSKMVCSKPLYVAI 391
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 83.4 bits (197), Expect = 2e-16
Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 8/193 (4%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
N++I+ L +K + ++G+I+S K +D++ KGYGFV FET +A+ A++
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETEEAAQNAIQK 179
Query: 125 LQAKGVQAQMAKVGIWFLRRLNRQQE-----QDPTNLYMANLPPHFKENDVDQLLAKFGQ 179
+ + + VG F R R +E + TN+Y+ N H+ + ++++ AKFG
Sbjct: 180 VNGMLLAGKKVFVGK-FQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGN 238
Query: 180 VVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKS 239
+ S ++ G+SKG GF + E+ E +Q + + I G L V A +++ +
Sbjct: 239 ITSCEVM-TVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHA 297
Query: 240 SYKQNESNGRTWR 252
K+ + R
Sbjct: 298 ELKKKHEQHKAER 310
Score = 71.3 bits (167), Expect = 1e-12
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
+LY+ L P+ + L + G ++S + D T GY +V+F+ A AE A+
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 125 LQAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTR 184
+ + + + ++ +W +R + N+++ NL + + FG ++S +
Sbjct: 93 MNFEALHGKPMRI-MWS-QRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCK 150
Query: 185 ILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAK 223
+ D G SKG GF E+ E + IQ NG + G K
Sbjct: 151 VAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKK 189
Score = 60.1 bits (139), Expect = 2e-09
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 20/181 (11%)
Query: 64 TNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVK 123
TN+Y++ + + L ++ +G+I S + + + K KG+GFV F AE AV+
Sbjct: 213 TNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEG--KSKGFGFVAFANPEEAETAVQ 270
Query: 124 GLQAKGVQAQMAKVGIWFLRRLN----------------RQQEQDPTNLYMANLPPHFKE 167
L ++ K+ + ++ + R Q+ NLY+ NL +
Sbjct: 271 ALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDD 330
Query: 168 NDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLL 227
+ + + +G + S +++ D +G+SKG GF E E+ + N + +PL
Sbjct: 331 DGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMV--CSKPLY 388
Query: 228 V 228
V
Sbjct: 389 V 389
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 58 VEQLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIAS 117
+++ NLY++ L D L + + YG+I S K + D+N + KG+GFV FE
Sbjct: 311 MQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEE 369
Query: 118 AEAAVKGLQAKGVQAQMAKVGI 139
A +AV + +K V ++ V I
Sbjct: 370 ATSAVTEMNSKMVCSKPLYVAI 391
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 81.4 bits (192), Expect = 9e-16
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 7/184 (3%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
N++I+ L +K + ++G+I+S K D N KGYGFV FET SA+ A++
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFETEHSAQTAIEK 204
Query: 125 LQAKGVQAQMAKVGIWFLRRLNRQQEQDP-----TNLYMANLPPHFKENDVDQLLAKFGQ 179
+ + + VG F R R +E TN+++ N H + + + +KFG+
Sbjct: 205 VNGMLLSDKKVYVGK-FQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGE 263
Query: 180 VVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKS 239
+ S ++ D G+ KG GF ++ Q ++ N + + G L V A +++ +
Sbjct: 264 ITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSA 323
Query: 240 SYKQ 243
K+
Sbjct: 324 ELKR 327
Score = 69.7 bits (163), Expect = 3e-12
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Query: 62 SRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAA 121
S +LYI L P+ ++ L + M G ++S + D + GY +V+F+ A AE A
Sbjct: 55 SMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERA 114
Query: 122 VKGLQAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVV 181
+ + + + + ++ +W +R + N+++ NL V + FG ++
Sbjct: 115 LDTMNFEVIHGRPMRI-MW-SQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNIL 172
Query: 182 STRILRDTHGQSKGVGFARMESREKCEQIIQMFNG 216
S ++ D G SKG GF E+ + I+ NG
Sbjct: 173 SCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNG 207
Score = 60.1 bits (139), Expect = 2e-09
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 19/191 (9%)
Query: 57 GVEQLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIA 116
G L TN++++ + + L M +G I S + D K KG+GFV F
Sbjct: 231 GESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQD 289
Query: 117 SAEAAVKGLQAKGVQAQMAKVGIWFLRRLN----------------RQQEQDPTNLYMAN 160
+A AV+ L ++ K+ + ++ + R Q NLY+ N
Sbjct: 290 AAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKN 349
Query: 161 LPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIP 220
+ ++ + + FG + S +++ D +G+SKG GF E E+ + N I
Sbjct: 350 IEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKMI- 408
Query: 221 GAKEPLLVKFA 231
GAK PL V A
Sbjct: 409 GAK-PLYVALA 418
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 81.4 bits (192), Expect = 9e-16
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 7/184 (3%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
N++I+ L +K + ++G+I+S K D N KGYGFV FET SA+ A++
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFETEHSAQTAIEK 204
Query: 125 LQAKGVQAQMAKVGIWFLRRLNRQQEQDP-----TNLYMANLPPHFKENDVDQLLAKFGQ 179
+ + + VG F R R +E TN+++ N H + + + +KFG+
Sbjct: 205 VNGMLLSDKKVYVGK-FQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGE 263
Query: 180 VVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKS 239
+ S ++ D G+ KG GF ++ Q ++ N + + G L V A +++ +
Sbjct: 264 ITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSA 323
Query: 240 SYKQ 243
K+
Sbjct: 324 ELKR 327
Score = 69.7 bits (163), Expect = 3e-12
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Query: 62 SRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAA 121
S +LYI L P+ ++ L + M G ++S + D + GY +V+F+ A AE A
Sbjct: 55 SMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERA 114
Query: 122 VKGLQAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVV 181
+ + + + + ++ +W +R + N+++ NL V + FG ++
Sbjct: 115 LDTMNFEVIHGRPMRI-MW-SQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNIL 172
Query: 182 STRILRDTHGQSKGVGFARMESREKCEQIIQMFNG 216
S ++ D G SKG GF E+ + I+ NG
Sbjct: 173 SCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNG 207
Score = 60.1 bits (139), Expect = 2e-09
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 19/191 (9%)
Query: 57 GVEQLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIA 116
G L TN++++ + + L M +G I S + D K KG+GFV F
Sbjct: 231 GESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQD 289
Query: 117 SAEAAVKGLQAKGVQAQMAKVGIWFLRRLN----------------RQQEQDPTNLYMAN 160
+A AV+ L ++ K+ + ++ + R Q NLY+ N
Sbjct: 290 AAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKN 349
Query: 161 LPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIP 220
+ ++ + + FG + S +++ D +G+SKG GF E E+ + N I
Sbjct: 350 IEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKMI- 408
Query: 221 GAKEPLLVKFA 231
GAK PL V A
Sbjct: 409 GAK-PLYVALA 418
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 64.1 bits (149), Expect = 1e-10
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
+++ + + D ++ + YGS+ S + DK+T KG FV F A A L
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 126 Q-AKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTR 184
K ++ V + NR + + L++ L E ++ ++ AKFG +
Sbjct: 117 HNIKVIEGMHHPVQMKPADTENRNERK----LFIGQLSKKHNEENLREIFAKFGHIEDCS 172
Query: 185 ILRDTHGQSKGVGFARMESREKCEQII--QMFNGNPIPGAKEPLLVKFAD 232
+LRD G+S+G F +R C + +M + + G PL+VKFAD
Sbjct: 173 VLRDQDGKSRGCAFVTFTNR-SCAVVATKEMHHSQTMEGCSAPLVVKFAD 221
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
NL+I L + D DL+ +G I+S K +DK TN K +GFV +E SA A+
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 125 LQAKGVQAQMAKV 137
+ + ++ KV
Sbjct: 560 MNGFQIGSKRLKV 572
Score = 42.7 bits (96), Expect = 4e-04
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 148 QQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQ-SKGVGFARMESR-E 205
+ + D +++ +P + E D +L K+G V S ILRD Q SKG F R +
Sbjct: 49 EPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKD 108
Query: 206 KCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKS-------SYKQNESNGR 249
E + N I G P+ +K AD N+ + S K NE N R
Sbjct: 109 AIEAQGALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLR 159
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 152 DPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRD-THGQSKGVGFARMESREKCEQI 210
D NL++ +LP F ++D+ A FG ++S ++ D SK GF E+ +
Sbjct: 497 DGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNA 556
Query: 211 IQMFNGNPIPGAKEPLLVKFADGGN 235
I NG I G+K + D GN
Sbjct: 557 ISAMNGFQI-GSKRLKVQLKVDRGN 580
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 64.1 bits (149), Expect = 1e-10
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
+++ + + D ++ + YGS+ S + DK+T KG FV F A A L
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 126 Q-AKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTR 184
K ++ V + NR + + L++ L E ++ ++ AKFG +
Sbjct: 117 HNIKVIEGMHHPVQMKPADTENRNERK----LFIGQLSKKHNEENLREIFAKFGHIEDCS 172
Query: 185 ILRDTHGQSKGVGFARMESREKCEQII--QMFNGNPIPGAKEPLLVKFAD 232
+LRD G+S+G F +R C + +M + + G PL+VKFAD
Sbjct: 173 VLRDQDGKSRGCAFVTFTNR-SCAVVATKEMHHSQTMEGCSAPLVVKFAD 221
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
NL+I L + D DL+ +G I+S K +DK TN K +GFV +E SA A+
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 125 LQAKGVQAQMAKV 137
+ + ++ KV
Sbjct: 560 MNGFQIGSKRLKV 572
Score = 42.7 bits (96), Expect = 4e-04
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 148 QQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQ-SKGVGFARMESR-E 205
+ + D +++ +P + E D +L K+G V S ILRD Q SKG F R +
Sbjct: 49 EPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKD 108
Query: 206 KCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKS-------SYKQNESNGR 249
E + N I G P+ +K AD N+ + S K NE N R
Sbjct: 109 AIEAQGALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLR 159
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 152 DPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRD-THGQSKGVGFARMESREKCEQI 210
D NL++ +LP F ++D+ A FG ++S ++ D SK GF E+ +
Sbjct: 497 DGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNA 556
Query: 211 IQMFNGNPIPGAKEPLLVKFADGGN 235
I NG I G+K + D GN
Sbjct: 557 ISAMNGFQI-GSKRLKVQLKVDRGN 580
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 63.3 bits (147), Expect = 3e-10
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 7/204 (3%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDF---ETIASAEAAV 122
L++ + N +KDL + + +G I + DK T KG F+ + ++ +A +
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATL 90
Query: 123 KGLQA-KGV-QAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQV 180
+ G+ +A K R + + + D L++ L E++V L A FG++
Sbjct: 91 HDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGEL 150
Query: 181 VSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGN-PIPGAKEPLLVKFADGGNKKKS 239
+LR G SKG F + + I +G+ +PGA L+VK+AD K++
Sbjct: 151 DEVTVLRGADGASKGCAFVKYKHGLDAHMAISALHGSQTMPGASSSLVVKYAD-TEKERQ 209
Query: 240 SYKQNESNGRTWRDNSETITQAAM 263
+ + + + N + Q M
Sbjct: 210 NRRMQQMAAQMGMLNPMLVNQVGM 233
Score = 54.4 bits (125), Expect = 1e-07
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
NL+I L D +L+QM +G I+S K +D+ TN+ K +GFV ++ I S++AA+
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 125 LQAKGVQAQMAKVGIWFLRRLNRQQ 149
+ G Q M ++ + R N +
Sbjct: 490 M--NGFQIGMKRLKVQLKRPRNESR 512
Score = 42.7 bits (96), Expect = 4e-04
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 10/144 (6%)
Query: 149 QEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTH-GQSKGVGF---ARMESR 204
++ D L++ +P + +E D+ L +FG++ IL+D + G KG F +S
Sbjct: 24 KDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSA 83
Query: 205 EKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKSSYKQNESN----GRTWRDNSETITQ 260
+C+ + + +PG + VK AD ++ S + + G + SE +
Sbjct: 84 VRCQATLH--DQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVR 141
Query: 261 AAMAVSGVYAGTMSAGGAGGECAG 284
A A G GA G G
Sbjct: 142 ALFATFGELDEVTVLRGADGASKG 165
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 152 DPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRD-THGQSKGVGFARMESREKCEQI 210
D NL++ +LP F + ++ Q+ A FG +VS ++ D QSK GF ++ +
Sbjct: 427 DGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAA 486
Query: 211 IQMFNG 216
I NG
Sbjct: 487 ITAMNG 492
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 63.3 bits (147), Expect = 3e-10
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 7/204 (3%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDF---ETIASAEAAV 122
L++ + N +KDL + + +G I + DK T KG F+ + ++ +A +
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATL 90
Query: 123 KGLQA-KGV-QAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQV 180
+ G+ +A K R + + + D L++ L E++V L A FG++
Sbjct: 91 HDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGEL 150
Query: 181 VSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGN-PIPGAKEPLLVKFADGGNKKKS 239
+LR G SKG F + + I +G+ +PGA L+VK+AD K++
Sbjct: 151 DEVTVLRGADGASKGCAFVKYKHGLDAHMAISALHGSQTMPGASSSLVVKYAD-TEKERQ 209
Query: 240 SYKQNESNGRTWRDNSETITQAAM 263
+ + + + N + Q M
Sbjct: 210 NRRMQQMAAQMGMLNPMLVNQVGM 233
Score = 54.4 bits (125), Expect = 1e-07
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
NL+I L D +L+QM +G I+S K +D+ TN+ K +GFV ++ I S++AA+
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 125 LQAKGVQAQMAKVGIWFLRRLNRQQ 149
+ G Q M ++ + R N +
Sbjct: 490 M--NGFQIGMKRLKVQLKRPRNESR 512
Score = 42.7 bits (96), Expect = 4e-04
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 10/144 (6%)
Query: 149 QEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTH-GQSKGVGF---ARMESR 204
++ D L++ +P + +E D+ L +FG++ IL+D + G KG F +S
Sbjct: 24 KDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSA 83
Query: 205 EKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKSSYKQNESN----GRTWRDNSETITQ 260
+C+ + + +PG + VK AD ++ S + + G + SE +
Sbjct: 84 VRCQATLH--DQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVR 141
Query: 261 AAMAVSGVYAGTMSAGGAGGECAG 284
A A G GA G G
Sbjct: 142 ALFATFGELDEVTVLRGADGASKG 165
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 152 DPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRD-THGQSKGVGFARMESREKCEQI 210
D NL++ +LP F + ++ Q+ A FG +VS ++ D QSK GF ++ +
Sbjct: 427 DGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAA 486
Query: 211 IQMFNG 216
I NG
Sbjct: 487 ITAMNG 492
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 62.1 bits (144), Expect = 6e-10
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
LY+ L T+ + + GS+ TK I D + + Y FV+F A A++ +
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDP---YAFVEFSDHGQASQALQTM 104
Query: 126 QAKGVQAQMAKVGIWFLRRLNRQQEQDPT---NLYMANLPPHFKENDVDQLLAKFGQVVS 182
+ + + KV W + +Q + D T ++++ +L + + FG V
Sbjct: 105 NKRLLLDREMKVN-WAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSD 163
Query: 183 TRILRDTHG-QSKGVGFARMESREKCEQIIQMFNG 216
+++RDT+ +SKG GF RE+ E+ I+ NG
Sbjct: 164 AKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 198
Score = 61.7 bits (143), Expect = 8e-10
Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 28/234 (11%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
++++ LS ++ L + Q +G + K I D NT K KGYGFV + AE A++
Sbjct: 136 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 195
Query: 125 LQAKGVQAQMAKVGIWFLRR-----------------LNRQQEQDPTNLYMANLPPHFKE 167
+ + + + + W R+ + Q D T++Y+ N+ E
Sbjct: 196 MNGQWLGRRTIRTN-WATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTE 253
Query: 168 NDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPG-AKEPL 226
+++ Q A FG++ RI + +G F + ++++ + I N + G
Sbjct: 254 DEIRQGFASFGRITEVRIFK-----MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCS 308
Query: 227 LVKFADGGNKKKSSYKQNESNGRTWRDNSETITQAAMAVSGVYAGTMSAGGAGG 280
K D G SY N + NS+ + G Y G GG GG
Sbjct: 309 WGKTGDTGKTPGGSYGYGYGNSSS-GGNSQ--PYSGYGGGGAYGGGQGGGGHGG 359
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 61.7 bits (143), Expect = 8e-10
Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 28/234 (11%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
++++ LS ++ L + Q +G + K I D NT K KGYGFV + AE A++
Sbjct: 23 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 82
Query: 125 LQAKGVQAQMAKVGIWFLRR-----------------LNRQQEQDPTNLYMANLPPHFKE 167
+ + + + + W R+ + Q D T++Y+ N+ E
Sbjct: 83 MNGQWLGRRTIRTN-WATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTE 140
Query: 168 NDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPG-AKEPL 226
+++ Q A FG++ RI + +G F + ++++ + I N + G
Sbjct: 141 DEIRQGFASFGRITEVRIFK-----MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCS 195
Query: 227 LVKFADGGNKKKSSYKQNESNGRTWRDNSETITQAAMAVSGVYAGTMSAGGAGG 280
K D G SY N + NS+ + G Y G GG GG
Sbjct: 196 WGKTGDTGKTPGGSYGYGYGNSSS-GGNSQ--PYSGYGGGGAYGGGQGGGGHGG 246
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 140 WFLRRLNRQQEQDPT---NLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHG-QSKG 195
W + +Q + D T ++++ +L + + FG V +++RDT+ +SKG
Sbjct: 5 WAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKG 64
Query: 196 VGFARMESREKCEQIIQMFNG 216
GF RE+ E+ I+ NG
Sbjct: 65 YGFVSYPKREEAERAIEQMNG 85
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 61.7 bits (143), Expect = 8e-10
Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 28/234 (11%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
++++ LS ++ L + Q +G + K I D NT K KGYGFV + AE A++
Sbjct: 33 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 92
Query: 125 LQAKGVQAQMAKVGIWFLRR-----------------LNRQQEQDPTNLYMANLPPHFKE 167
+ + + + + W R+ + Q D T++Y+ N+ E
Sbjct: 93 MNGQWLGRRTIRTN-WATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTE 150
Query: 168 NDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPG-AKEPL 226
+++ Q A FG++ RI + +G F + ++++ + I N + G
Sbjct: 151 DEIRQGFASFGRITEVRIFK-----MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCS 205
Query: 227 LVKFADGGNKKKSSYKQNESNGRTWRDNSETITQAAMAVSGVYAGTMSAGGAGG 280
K D G SY N + NS+ + G Y G GG GG
Sbjct: 206 WGKTGDTGKTPGGSYGYGYGNSSS-GGNSQ--PYSGYGGGGAYGGGQGGGGHGG 256
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 140 WFLRRLNRQQEQDPT---NLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHG-QSKG 195
W + +Q + D T ++++ +L + + FG V +++RDT+ +SKG
Sbjct: 15 WAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKG 74
Query: 196 VGFARMESREKCEQIIQMFNG 216
GF RE+ E+ I+ NG
Sbjct: 75 YGFVSYPKREEAERAIEQMNG 95
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 61.7 bits (143), Expect = 8e-10
Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 28/234 (11%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
++++ LS ++ L + Q +G + K I D NT K KGYGFV + AE A++
Sbjct: 104 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 163
Query: 125 LQAKGVQAQMAKVGIWFLRR-----------------LNRQQEQDPTNLYMANLPPHFKE 167
+ + + + + W R+ + Q D T++Y+ N+ E
Sbjct: 164 MNGQWLGRRTIRTN-WATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTE 221
Query: 168 NDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPG-AKEPL 226
+++ Q A FG++ RI + +G F + ++++ + I N + G
Sbjct: 222 DEIRQGFASFGRITEVRIFK-----MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCS 276
Query: 227 LVKFADGGNKKKSSYKQNESNGRTWRDNSETITQAAMAVSGVYAGTMSAGGAGG 280
K D G SY N + NS+ + G Y G GG GG
Sbjct: 277 WGKTGDTGKTPGGSYGYGYGNSSS-GGNSQ--PYSGYGGGGAYGGGQGGGGHGG 327
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 140 WFLRRLNRQQEQDPT---NLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHG-QSKG 195
W + +Q + D T ++++ +L + + FG V +++RDT+ +SKG
Sbjct: 86 WAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKG 145
Query: 196 VGFARMESREKCEQIIQMFNG 216
GF RE+ E+ I+ NG
Sbjct: 146 YGFVSYPKREEAERAIEQMNG 166
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 61.7 bits (143), Expect = 8e-10
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 20/184 (10%)
Query: 64 TNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVK 123
TN+Y++ + + L ++ +G+I S + + + K KG+GFV F AE AV+
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEG--KSKGFGFVAFANPEEAETAVQ 210
Query: 124 GLQAKGVQAQMAKVGIWFLRRLN----------------RQQEQDPTNLYMANLPPHFKE 167
L ++ K+ + ++ + R Q+ NLY+ NL +
Sbjct: 211 ALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDD 270
Query: 168 NDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLL 227
+ + + +G + S +++ D +G+SKG GF E E+ + N + +PL
Sbjct: 271 DGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMV--CSKPLY 328
Query: 228 VKFA 231
V A
Sbjct: 329 VAIA 332
Score = 52.8 bits (121), Expect = 4e-07
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 154 TNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQM 213
TN+Y+ N H+ + +++L AKFG + S ++ G+SKG GF + E+ E +Q
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAETAVQA 211
Query: 214 FNGNPIPGAKEPLLVKFADGGNKKKSSYKQNESNGRTWR 252
+ + I G L V A +++ + K+ + R
Sbjct: 212 LHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAER 250
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 58 VEQLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIAS 117
+++ NLY++ L D L + + YG+I S K + D+N + KG+GFV FE
Sbjct: 251 MQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEE 309
Query: 118 AEAAVKGLQAKGVQAQMAKVGI 139
A +AV + +K V ++ V I
Sbjct: 310 ATSAVTEMNSKMVCSKPLYVAI 331
Score = 39.1 bits (87), Expect = 0.005
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
+LY+ L P+ + L + G ++S + D T GY +V+F+ A AE A+
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 125 LQAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHF 165
+ + + + ++ +W +R + N+++ NL F
Sbjct: 93 MNFEALHGKPMRI-MW-SQRDPAMRRSGAGNIFIKNLDKVF 131
>Z78536-3|CAB01717.1| 270|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 270
Score = 61.3 bits (142), Expect = 1e-09
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
++++ LS + +++ L +G + K I D T K KGYGFV F +AE A+ G
Sbjct: 28 HVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAG 87
Query: 125 LQAKGVQAQMAKVGIWFLRRLNRQQ------EQ-------DPTNLYMANLPPHFKENDVD 171
+ K + + + W R+ + + EQ D T++Y+ N+ + D+
Sbjct: 88 MNGKWIGKRAVRTN-WAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLR 146
Query: 172 QLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPG 221
L + +G + RI + ++ F R E +E + I NG + G
Sbjct: 147 DLFSTYGDIAEVRIFK-----TQRYAFVRYEKKECATKAIMEMNGKEMAG 191
Score = 32.3 bits (70), Expect = 0.54
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 64 TNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVK 123
T++Y+ +S TTD DL + YG I + K + Y FV +E A A+
Sbjct: 129 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF------KTQRYAFVRYEKKECATKAIM 182
Query: 124 GLQAK 128
+ K
Sbjct: 183 EMNGK 187
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 57.6 bits (133), Expect = 1e-08
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 58 VEQLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIAS 117
VE+ +Y+ GL ++ L ++ G ++S D+ T +G+GFV+F
Sbjct: 7 VERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEED 66
Query: 118 AEAAVKGLQAKGVQAQMAKVGIWFLRRLNRQQEQD-PTNLYMANLPPHFKENDVDQLLAK 176
A+ A+K L + + KV + ++ D N+++ NL P E + +
Sbjct: 67 ADYAIKILNMIKLYGKPIKVN----KASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSA 122
Query: 177 FGQVVST-RILRDT-HGQSKGVGFARMESREKCEQIIQMFNG 216
FG ++ +I+RD G SKG F S E + ++ NG
Sbjct: 123 FGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNG 164
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 57.6 bits (133), Expect = 1e-08
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 58 VEQLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIAS 117
VE+ +Y+ GL ++ L ++ G ++S D+ T +G+GFV+F
Sbjct: 17 VERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEED 76
Query: 118 AEAAVKGLQAKGVQAQMAKVGIWFLRRLNRQQEQD-PTNLYMANLPPHFKENDVDQLLAK 176
A+ A+K L + + KV + ++ D N+++ NL P E + +
Sbjct: 77 ADYAIKILNMIKLYGKPIKVN----KASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSA 132
Query: 177 FGQVVST-RILRDT-HGQSKGVGFARMESREKCEQIIQMFNG 216
FG ++ +I+RD G SKG F S E + ++ NG
Sbjct: 133 FGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNG 174
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 56.4 bits (130), Expect = 3e-08
Identities = 51/234 (21%), Positives = 90/234 (38%), Gaps = 11/234 (4%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG- 124
+++ GL+ NTTD + + +G I + D T + +G+GFV F +AA+K
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 125 ---LQAKGVQAQMAKVGIWFLRRLNRQQEQDPT-NLYMANLPPHFKENDVDQLLAKFGQV 180
+ K V + A NR + T LY++ + E+ + + K+G V
Sbjct: 85 PHIIDGKTVDPKRAVP----RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTV 140
Query: 181 VSTRILRDTHGQS-KGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKS 239
+ I+ D Q +G GF + + +Q + + + + G + + + K
Sbjct: 141 TKSEIILDKATQKPRGFGFVTFDDHDSVDQCV-LQKSHMVNGHRCDVRKGLSKDEMSKAQ 199
Query: 240 SYKQNESNGRTWRDNSETITQAAMAVSGVYAGTMSAGGAGGECAGVYRSSGVYG 293
+ E+ G RD G + G GG G G YG
Sbjct: 200 MNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYG 253
Score = 45.2 bits (102), Expect = 7e-05
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 61 LSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEA 120
+S LY+ G+ + T+ L + YG++ ++ ILDK T K +G+GFV F+ S +
Sbjct: 111 VSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQ 170
Query: 121 AV 122
V
Sbjct: 171 CV 172
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 56.4 bits (130), Expect = 3e-08
Identities = 51/234 (21%), Positives = 90/234 (38%), Gaps = 11/234 (4%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG- 124
+++ GL+ NTTD + + +G I + D T + +G+GFV F +AA+K
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 125 ---LQAKGVQAQMAKVGIWFLRRLNRQQEQDPT-NLYMANLPPHFKENDVDQLLAKFGQV 180
+ K V + A NR + T LY++ + E+ + + K+G V
Sbjct: 85 PHIIDGKTVDPKRAVP----RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTV 140
Query: 181 VSTRILRDTHGQS-KGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKS 239
+ I+ D Q +G GF + + +Q + + + + G + + + K
Sbjct: 141 TKSEIILDKATQKPRGFGFVTFDDHDSVDQCV-LQKSHMVNGHRCDVRKGLSKDEMSKAQ 199
Query: 240 SYKQNESNGRTWRDNSETITQAAMAVSGVYAGTMSAGGAGGECAGVYRSSGVYG 293
+ E+ G RD G + G GG G G YG
Sbjct: 200 MNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYG 253
Score = 45.2 bits (102), Expect = 7e-05
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 61 LSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEA 120
+S LY+ G+ + T+ L + YG++ ++ ILDK T K +G+GFV F+ S +
Sbjct: 111 VSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQ 170
Query: 121 AV 122
V
Sbjct: 171 CV 172
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 56.4 bits (130), Expect = 3e-08
Identities = 51/234 (21%), Positives = 90/234 (38%), Gaps = 11/234 (4%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG- 124
+++ GL+ NTTD + + +G I + D T + +G+GFV F +AA+K
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 125 ---LQAKGVQAQMAKVGIWFLRRLNRQQEQDPT-NLYMANLPPHFKENDVDQLLAKFGQV 180
+ K V + A NR + T LY++ + E+ + + K+G V
Sbjct: 85 PHIIDGKTVDPKRAVP----RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTV 140
Query: 181 VSTRILRDTHGQS-KGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKS 239
+ I+ D Q +G GF + + +Q + + + + G + + + K
Sbjct: 141 TKSEIILDKATQKPRGFGFVTFDDHDSVDQCV-LQKSHMVNGHRCDVRKGLSKDEMSKAQ 199
Query: 240 SYKQNESNGRTWRDNSETITQAAMAVSGVYAGTMSAGGAGGECAGVYRSSGVYG 293
+ E+ G RD G + G GG G G YG
Sbjct: 200 MNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYG 253
Score = 45.2 bits (102), Expect = 7e-05
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 61 LSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEA 120
+S LY+ G+ + T+ L + YG++ ++ ILDK T K +G+GFV F+ S +
Sbjct: 111 VSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQ 170
Query: 121 AV 122
V
Sbjct: 171 CV 172
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 55.6 bits (128), Expect = 5e-08
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
L+I GLS +TTD+ L +G ++ I D NT +G+GFV F +I SAE+A+
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDR 110
Query: 126 QAK-GVQAQMAKVGIWFLRRLNRQQEQD--PTNLYMANLPPHFK---------ENDVDQL 173
K G + +K R + R+Q P + + P K + VD L
Sbjct: 111 PHKLGGKTVDSK------RAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSL 164
Query: 174 LAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADG 233
F + T + GQ +G+GF E +E ++ + +G I ++ + F
Sbjct: 165 RVYF-ETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKH 223
Query: 234 GNKKKSSYKQNESNGRTWRDNSETITQ 260
N + +K+ +S + RD E ++Q
Sbjct: 224 PN-GSTYWKRPQSQSHSQRDLFEQLSQ 249
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 55.6 bits (128), Expect = 5e-08
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
L+I GLS +TTD+ L +G ++ I D NT +G+GFV F +I SAE+A+
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDR 130
Query: 126 QAK-GVQAQMAKVGIWFLRRLNRQQEQD--PTNLYMANLPPHFK---------ENDVDQL 173
K G + +K R + R+Q P + + P K + VD L
Sbjct: 131 PHKLGGKTVDSK------RAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSL 184
Query: 174 LAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADG 233
F + T + GQ +G+GF E +E ++ + +G I ++ + F
Sbjct: 185 RVYF-ETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKH 243
Query: 234 GNKKKSSYKQNESNGRTWRDNSETITQ 260
N + +K+ +S + RD E ++Q
Sbjct: 244 PN-GSTYWKRPQSQSHSQRDLFEQLSQ 269
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 55.6 bits (128), Expect = 5e-08
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
L+I GLS +TTD+ L +G ++ I D NT +G+GFV F +I SAE+A+
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDR 131
Query: 126 QAK-GVQAQMAKVGIWFLRRLNRQQEQD--PTNLYMANLPPHFK---------ENDVDQL 173
K G + +K R + R+Q P + + P K + VD L
Sbjct: 132 PHKLGGKTVDSK------RAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSL 185
Query: 174 LAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADG 233
F + T + GQ +G+GF E +E ++ + +G I ++ + F
Sbjct: 186 RVYF-ETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKH 244
Query: 234 GNKKKSSYKQNESNGRTWRDNSETITQ 260
N + +K+ +S + RD E ++Q
Sbjct: 245 PN-GSTYWKRPQSQSHSQRDLFEQLSQ 270
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 52.8 bits (121), Expect = 4e-07
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 64 TNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVK 123
T +++ GL +T+DK L + + +G I I D+NT K +GYGFV + ASAE A K
Sbjct: 35 TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACK 94
Score = 35.9 bits (79), Expect = 0.044
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 154 TNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQ-SKGVGFARMESREKCEQIIQ 212
T +++ LP H + + + +FG + ++ D + Q S+G GF M+ R E+ +
Sbjct: 35 TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACK 94
Query: 213 MFNGNPI 219
+ NPI
Sbjct: 95 --DPNPI 99
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/76 (26%), Positives = 45/76 (59%)
Query: 62 SRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAA 121
S+ ++++ +S + ++ + + G+++S K + D+ T K KGYGF++F I +AE A
Sbjct: 16 SQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVA 75
Query: 122 VKGLQAKGVQAQMAKV 137
++ L + ++ +V
Sbjct: 76 IRNLNGYELSGRILRV 91
Score = 35.9 bits (79), Expect = 0.044
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 150 EQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTH-GQSKGVGFARMESREKCE 208
++ ++++ N+ E+ + + +K G V+S +++ D G+ KG GF + E
Sbjct: 14 DRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAE 73
Query: 209 QIIQMFNGNPIPGAKEPLLVKFADGG 234
I+ NG + G L V A GG
Sbjct: 74 VAIRNLNGYELSG--RILRVDSAAGG 97
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
NL+I L + D DL+ +G I+S K +DK TN K +GFV +E SA A+
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 395
Query: 125 LQAKGVQAQMAKV 137
+ + ++ KV
Sbjct: 396 MNGFQIGSKRLKV 408
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 152 DPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRD-THGQSKGVGFARMESREKCEQI 210
D NL++ +LP F ++D+ A FG ++S ++ D SK GF E+ +
Sbjct: 333 DGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNA 392
Query: 211 IQMFNGNPIPGAKEPLLVKFADGGN 235
I NG I G+K + D GN
Sbjct: 393 ISAMNGFQI-GSKRLKVQLKVDRGN 416
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 49.6 bits (113), Expect = 3e-06
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
L++ L P TD+ L + G+++ K I + + Y FV+F A A++
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDP---YAFVEFSDHNQATLALQSH 98
Query: 126 QAKGVQAQMAKVGIWFLRRLNRQQEQDPT-----NLYMANLPPHFKENDVDQLLAKFGQV 180
+ + + V F R + P ++++ +L + + KFG+V
Sbjct: 99 NGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEV 158
Query: 181 VSTRILRDTH-GQSKGVGFARMESREKCEQIIQMFNG 216
+I+RD + + KG GF RE E+ I NG
Sbjct: 159 SEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNG 195
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 87 YGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGLQAKGVQAQMAKVGIWFLRRLN 146
+G + K I D NTNK KGYGFV + AE A+ + + + + W R+ +
Sbjct: 155 FGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTN-WATRKPD 213
Query: 147 RQQEQ 151
E+
Sbjct: 214 EDGER 218
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 151 QDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQI 210
+DP L++ANL P + + L + G V+ +I+ + G + F +
Sbjct: 37 EDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFE--GLNDPYAFVEFSDHNQATLA 94
Query: 211 IQMFNGNPI 219
+Q NG +
Sbjct: 95 LQSHNGREL 103
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 48.8 bits (111), Expect = 6e-06
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 153 PTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQ 212
P L+++N+P F++ D+ + KFG V I+ + G SKG GF ME + E+ Q
Sbjct: 152 PKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERARQ 210
Query: 213 MFNGNPIPGAK 223
+G+ I G K
Sbjct: 211 ELHGSMIEGRK 221
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
L++ + D DL M + +G + + I N KG+GFV E AE A + L
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIF--NERGSKGFGFVTMERPQDAERARQEL 212
Query: 126 QAKGVQAQMAKV 137
++ + +V
Sbjct: 213 HGSMIEGRKIEV 224
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 48.8 bits (111), Expect = 6e-06
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 153 PTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQ 212
P L+++N+P F++ D+ + KFG V I+ + G SKG GF ME + E+ Q
Sbjct: 152 PKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERARQ 210
Query: 213 MFNGNPIPGAK 223
+G+ I G K
Sbjct: 211 ELHGSMIEGRK 221
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
L++ + D DL M + +G + + I N KG+GFV E AE A + L
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIF--NERGSKGFGFVTMERPQDAERARQEL 212
Query: 126 QAKGVQAQMAKV 137
++ + +V
Sbjct: 213 HGSMIEGRKIEV 224
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 48.4 bits (110), Expect = 8e-06
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 143 RRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARME 202
R + P L+++N+P ++E D+ + K G VV I+ + G SKG GF M+
Sbjct: 89 RSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQ 147
Query: 203 SREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKK 237
+ + ++ FNG I G + + + NKK
Sbjct: 148 NPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKK 182
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 48.4 bits (110), Expect = 8e-06
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 143 RRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARME 202
R + P L+++N+P ++E D+ + K G VV I+ + G SKG GF M+
Sbjct: 89 RSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQ 147
Query: 203 SREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKK 237
+ + ++ FNG I G + + + NKK
Sbjct: 148 NPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKK 182
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 156 LYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFN 215
+Y++N+P F+E D+ + +G+V+S I+ + G SKG GF ++S E CE+ +
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAALH 111
Query: 216 GNPIPGAKEPLLVKFADGGNKKKSSYKQNE 245
+ + G + V+ A +K + QNE
Sbjct: 112 ESHVQG--RIIEVRRATPTRRKLINNPQNE 139
Score = 39.5 bits (88), Expect = 0.004
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
+Y+ + + ++DL M YG ++S + + N KG+GFV ++I S E A L
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAAL 110
Query: 126 QAKGVQAQMAKV 137
VQ ++ +V
Sbjct: 111 HESHVQGRIIEV 122
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 156 LYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFN 215
+Y++N+P F+E D+ + +G+V+S I+ + G SKG GF ++S E CE+ +
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAALH 111
Query: 216 GNPIPGAKEPLLVKFADGGNKKKSSYKQNE 245
+ + G + V+ A +K + QNE
Sbjct: 112 ESHVQG--RIIEVRRATPTRRKLINNPQNE 139
Score = 39.5 bits (88), Expect = 0.004
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
+Y+ + + ++DL M YG ++S + + N KG+GFV ++I S E A L
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAAL 110
Query: 126 QAKGVQAQMAKV 137
VQ ++ +V
Sbjct: 111 HESHVQGRIIEV 122
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 45.2 bits (102), Expect = 7e-05
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 61 LSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDF---ETIAS 117
L L++R L T + DL + + YG + + ++DK T CKG+ V+F E +
Sbjct: 276 LETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVA 335
Query: 118 AEAAVKGLQAKG 129
A +A+ G KG
Sbjct: 336 AYSALDGYVFKG 347
Score = 43.6 bits (98), Expect = 2e-04
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 21/168 (12%)
Query: 62 SRTNLYIRGLSPNTTDKDLVQMCQM-YGSIISTKAILDKNTNKCK-------GYGFVDFE 113
S + L+++ L+ +TTD L + + YG ++ + A + K N + G+GFV F
Sbjct: 639 SGSTLFVKNLAFDTTDGSLEFLFRKRYGDLVKS-AQISKKLNPAEPTKPLSMGFGFVQFY 697
Query: 114 TIASAEAAVKGLQAKGVQAQMAKVGIWF--------LRRLN-RQQEQ-DPTNLYMANLPP 163
T A+ A+K +Q + + ++ I L+R +Q+EQ + T L + NLP
Sbjct: 698 TAFDAKTALKDMQGELLDGHSLELKISHRENADKGALKRKEVKQKEQGECTKLLVRNLPF 757
Query: 164 HFKENDVDQLLAKFGQVVSTRILR--DTHGQSKGVGFARMESREKCEQ 209
+V+ L FG V + RI + Q +G GF S ++ +
Sbjct: 758 EASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHR 805
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Query: 147 RQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTH-GQSKGVGFARMESRE 205
R++ + L++ NLP KE+D+ L K+G+V +++ D G KG E
Sbjct: 272 REKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPE 331
Query: 206 KCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKSSYKQNES 246
+G G +L G++K++ + ES
Sbjct: 332 AAVAAYSALDGYVFKGRMMHIL-----PGDEKRTKEGEEES 367
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 45.2 bits (102), Expect = 7e-05
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 61 LSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEA 120
+S LY+ G+ + T+ L + YG++ ++ ILDK T K +G+GFV F+ S +
Sbjct: 73 VSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQ 132
Query: 121 AV 122
V
Sbjct: 133 CV 134
Score = 43.6 bits (98), Expect = 2e-04
Identities = 45/213 (21%), Positives = 78/213 (36%), Gaps = 11/213 (5%)
Query: 87 YGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG----LQAKGVQAQMAKVGIWFL 142
+G I + D T + +G+GFV F +AA+K + K V + A
Sbjct: 8 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVP----R 63
Query: 143 RRLNRQQEQDPT-NLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQS-KGVGFAR 200
NR + T LY++ + E+ + + K+G V + I+ D Q +G GF
Sbjct: 64 DDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 123
Query: 201 MESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKSSYKQNESNGRTWRDNSETITQ 260
+ + +Q + + + + G + + + K + E+ G RD
Sbjct: 124 FDDHDSVDQCV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETRGGRSRDGQRGGYN 182
Query: 261 AAMAVSGVYAGTMSAGGAGGECAGVYRSSGVYG 293
G + G GG G G YG
Sbjct: 183 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYG 215
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 45.2 bits (102), Expect = 7e-05
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 61 LSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEA 120
+S LY+ G+ + T+ L + YG++ ++ ILDK T K +G+GFV F+ S +
Sbjct: 73 VSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQ 132
Query: 121 AV 122
V
Sbjct: 133 CV 134
Score = 43.6 bits (98), Expect = 2e-04
Identities = 45/213 (21%), Positives = 78/213 (36%), Gaps = 11/213 (5%)
Query: 87 YGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG----LQAKGVQAQMAKVGIWFL 142
+G I + D T + +G+GFV F +AA+K + K V + A
Sbjct: 8 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVP----R 63
Query: 143 RRLNRQQEQDPT-NLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQS-KGVGFAR 200
NR + T LY++ + E+ + + K+G V + I+ D Q +G GF
Sbjct: 64 DDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 123
Query: 201 MESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKSSYKQNESNGRTWRDNSETITQ 260
+ + +Q + + + + G + + + K + E+ G RD
Sbjct: 124 FDDHDSVDQCV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETRGGRSRDGQRGGYN 182
Query: 261 AAMAVSGVYAGTMSAGGAGGECAGVYRSSGVYG 293
G + G GG G G YG
Sbjct: 183 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYG 215
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 44.8 bits (101), Expect = 9e-05
Identities = 37/185 (20%), Positives = 79/185 (42%), Gaps = 7/185 (3%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
++I GLS TT ++L +G + + D T + +G+GF+ F +S + +
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 126 QAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRI 185
+ + + + + F +R + +++ L D+ Q +G+V +
Sbjct: 107 EHE-LDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML 165
Query: 186 LRDTHGQ-SKGVGFARMESREKCEQIIQM----FNGNPIPGAK-EPLLVKFADGGNKKKS 239
+ D Q +G GF +S E +++ ++ NG + K +P V NK ++
Sbjct: 166 MFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKEVMLPVQLNKSRA 225
Query: 240 SYKQN 244
+ +N
Sbjct: 226 AAARN 230
Score = 42.3 bits (95), Expect = 5e-04
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVK-- 123
++I GLS +T +D+ Q + YG + + DK T + +G+GFV F++ A+ +
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIH 195
Query: 124 --GLQAKGVQAQMAK-VGIWFLRRLNRQQEQDPTNLYMANLPP 163
+ K V+ + A+ + +LN+ + NLY +PP
Sbjct: 196 FHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARNLY--GMPP 236
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 44.8 bits (101), Expect = 9e-05
Identities = 37/185 (20%), Positives = 79/185 (42%), Gaps = 7/185 (3%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
++I GLS TT ++L +G + + D T + +G+GF+ F +S + +
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 126 QAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRI 185
+ + + + + F +R + +++ L D+ Q +G+V +
Sbjct: 107 EHE-LDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML 165
Query: 186 LRDTHGQ-SKGVGFARMESREKCEQIIQM----FNGNPIPGAK-EPLLVKFADGGNKKKS 239
+ D Q +G GF +S E +++ ++ NG + K +P V NK ++
Sbjct: 166 MFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKEVMLPVQLNKSRA 225
Query: 240 SYKQN 244
+ +N
Sbjct: 226 AAARN 230
Score = 42.3 bits (95), Expect = 5e-04
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVK-- 123
++I GLS +T +D+ Q + YG + + DK T + +G+GFV F++ A+ +
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIH 195
Query: 124 --GLQAKGVQAQMAK-VGIWFLRRLNRQQEQDPTNLYMANLPP 163
+ K V+ + A+ + +LN+ + NLY +PP
Sbjct: 196 FHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARNLY--GMPP 236
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 44.0 bits (99), Expect = 2e-04
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
+YI GLS ++ D++ + YG +++ I DK+T K KG+ F+ ++ S AV
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 126 QAKGVQAQMAKV 137
+ +M +V
Sbjct: 100 NGISLHKRMIRV 111
Score = 37.1 bits (82), Expect = 0.019
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 142 LRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTH-GQSKGVGFAR 200
L++ Q +D +Y+ L E DV + +++G+V++ ++RD G+SKG F
Sbjct: 26 LKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLC 85
Query: 201 MESREKCEQIIQMFNG 216
+ + + FNG
Sbjct: 86 YKDQRSTILAVDNFNG 101
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 42.7 bits (96), Expect = 4e-04
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 23/122 (18%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFET-------IASA 118
+++ G+SP ++DL YG + + D+ + +G+ FV+F T +A+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 119 EAAVKGLQAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFG 178
E +KG K V+ + AK R N++ +++ LP + E D+ +FG
Sbjct: 91 EQTIKG---KSVEVKPAK------SRENKK-------VFVGGLPSDYSEQDLRSHFEQFG 134
Query: 179 QV 180
+V
Sbjct: 135 KV 136
Score = 31.9 bits (69), Expect = 0.71
Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 156 LYMANLPPHFKENDVDQLLAKFGQVVSTRILRD-THGQSKGVGFARMESREKCE 208
+++ + P D+ ++G+V ++ D T+G+S+G F + E C+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCK 84
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 62 SRTN--LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAE 119
SR N +++ GL + +++DL + +G + + DK T + + F+ FE SA+
Sbjct: 106 SRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESAD 165
Query: 120 AA 121
A
Sbjct: 166 KA 167
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 42.7 bits (96), Expect = 4e-04
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 23/122 (18%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFET-------IASA 118
+++ G+SP ++DL YG + + D+ + +G+ FV+F T +A+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 119 EAAVKGLQAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFG 178
E +KG K V+ + AK R N++ +++ LP + E D+ +FG
Sbjct: 91 EQTIKG---KSVEVKPAK------SRENKK-------VFVGGLPSDYSEQDLRSHFEQFG 134
Query: 179 QV 180
+V
Sbjct: 135 KV 136
Score = 31.9 bits (69), Expect = 0.71
Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 156 LYMANLPPHFKENDVDQLLAKFGQVVSTRILRD-THGQSKGVGFARMESREKCE 208
+++ + P D+ ++G+V ++ D T+G+S+G F + E C+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCK 84
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 62 SRTN--LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAE 119
SR N +++ GL + +++DL + +G + + DK T + + F+ FE SA+
Sbjct: 106 SRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESAD 165
Query: 120 AA 121
A
Sbjct: 166 KA 167
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 42.7 bits (96), Expect = 4e-04
Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 59 EQLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDF--ETIA 116
E+ + L I ++ +T +DL + G++ + I D T + KG +V+F E
Sbjct: 20 EERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
Query: 117 SAEAAVKGLQAKGVQAQMAKVGIWFLRRLNRQ----------QEQDPTNLYMANLPPHFK 166
A+ G + G Q+ + R N + PT++ + NL P
Sbjct: 80 PLGLALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKID 139
Query: 167 ENDVDQLLAKFGQVVSTRILRDTHGQSKG---VGFARMESREK-CEQI 210
E + + FG++ + D++ +++G + F + +K CEQ+
Sbjct: 140 EKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQL 187
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 42.7 bits (96), Expect = 4e-04
Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 59 EQLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDF--ETIA 116
E+ + L I ++ +T +DL + G++ + I D T + KG +V+F E
Sbjct: 165 EERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
Query: 117 SAEAAVKGLQAKGVQAQMAKVGIWFLRRLNRQ----------QEQDPTNLYMANLPPHFK 166
A+ G + G Q+ + R N + PT++ + NL P
Sbjct: 225 PLGLALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKID 284
Query: 167 ENDVDQLLAKFGQVVSTRILRDTHGQSKG---VGFARMESREK-CEQI 210
E + + FG++ + D++ +++G + F + +K CEQ+
Sbjct: 285 EKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQL 332
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 42.3 bits (95), Expect = 5e-04
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 59 EQLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAI----LDKNTNKCKGYGFVDFET 114
+ + +T+++IRG++P T + Q+ YG +I +K D N + + + F
Sbjct: 89 DDVKKTSIWIRGMTPATKASSVKQLASQYGKVIQSKIFNSKAADANGDVKNCFALIQFAD 148
Query: 115 IASAEAAVKGLQAKGVQAQMAKV 137
+ + E A+ L K Q ++ +V
Sbjct: 149 VTAMELAMTSLHQKNYQGRVLRV 171
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 42.3 bits (95), Expect = 5e-04
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 61 LSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEA 120
L ++ +++R + TD +L + +G++ S + + K+ K KG FVDF+T ASA+
Sbjct: 680 LEKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKD-GKPKGIAFVDFDTEASAQK 738
Query: 121 AV 122
V
Sbjct: 739 CV 740
Score = 32.7 bits (71), Expect = 0.41
Identities = 21/111 (18%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 152 DPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQII 211
+ + +++ N+ ++++ L +KFG V S R + G+ KG+ F ++ ++ +
Sbjct: 681 EKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCV 740
Query: 212 QMFNGNPIPGAKEPLLVKFADGGNKKKSSYKQNESNGRTWRDNSETITQAA 262
+G+ + + L V ++ KK S+ + + G + ++ AA
Sbjct: 741 A--SGDKLMLRERELEVALSNPPVKKDKSHGKPAAIGASLEEDGPRKGHAA 789
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 40.7 bits (91), Expect = 0.002
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 156 LYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFN 215
+++ LP + E+ V +LL FG + + + D+ G SKG FA +Q I N
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 216 GNPIPGAKEPLLVKFADGGNKKKSSYKQNESNGRTWRDNSE 256
G + G K+ L+V+ A ++ ++ N ++ D S+
Sbjct: 353 GMQL-GDKQ-LVVQLACANQQRHNTNLPNSASAIAGIDLSQ 391
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 40.7 bits (91), Expect = 0.002
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 156 LYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFN 215
+++ LP + E+ V +LL FG + + + D+ G SKG FA +Q I N
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 216 GNPIPGAKEPLLVKFADGGNKKKSSYKQNESNGRTWRDNSE 256
G + G K+ L+V+ A ++ ++ N ++ D S+
Sbjct: 353 GMQL-GDKQ-LVVQLACANQQRHNTNLPNSASAIAGIDLSQ 391
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 40.7 bits (91), Expect = 0.002
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 156 LYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFN 215
+++ LP + E+ V +LL FG + + + D+ G SKG FA +Q I N
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 327
Query: 216 GNPIPGAKEPLLVKFADGGNKKKSSYKQNESNGRTWRDNSE 256
G + G K+ L+V+ A ++ ++ N ++ D S+
Sbjct: 328 GMQL-GDKQ-LVVQLACANQQRHNTNLPNSASAIAGIDLSQ 366
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 40.7 bits (91), Expect = 0.002
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 156 LYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFN 215
+++ LP + E+ V +LL FG + + + D+ G SKG FA +Q I N
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 330
Query: 216 GNPIPGAKEPLLVKFADGGNKKKSSYKQNESNGRTWRDNSE 256
G + G K+ L+V+ A ++ ++ N ++ D S+
Sbjct: 331 GMQL-GDKQ-LVVQLACANQQRHNTNLPNSASAIAGIDLSQ 369
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 64 TNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVK 123
T+L I LS TT DL + + YG I DK + + KG+GFV F AE A+
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 124 GLQAKGVQAQMAKV 137
K V + +V
Sbjct: 79 RTDGKLVDGRELRV 92
Score = 38.3 bits (85), Expect = 0.008
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 154 TNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHG-QSKGVGFARMESREKCEQIIQ 212
T+L + NL ND+ + ++G + I RD + QSKG GF R R E +
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 213 MFNGNPIPG 221
+G + G
Sbjct: 79 RTDGKLVDG 87
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 64 TNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVK 123
T+L I LS TT DL + + YG I DK + + KG+GFV F AE A+
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 124 GLQAKGVQAQMAKV 137
K V + +V
Sbjct: 79 RTDGKLVDGRELRV 92
Score = 38.3 bits (85), Expect = 0.008
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 154 TNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHG-QSKGVGFARMESREKCEQIIQ 212
T+L + NL ND+ + ++G + I RD + QSKG GF R R E +
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 213 MFNGNPIPG 221
+G + G
Sbjct: 79 RTDGKLVDG 87
>AL117204-23|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 39.9 bits (89), Expect = 0.003
Identities = 16/63 (25%), Positives = 34/63 (53%)
Query: 63 RTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAV 122
+ LY+ G + + T+K L+ +G +++ +D + K +G+GFV+F+ A A+
Sbjct: 10 KRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAI 69
Query: 123 KGL 125
+
Sbjct: 70 DNM 72
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 39.5 bits (88), Expect = 0.004
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 143 RRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRD-THGQSKGVGFARM 201
R+++R + + T + NLP E+++ L K G+V+ I RD G KG F
Sbjct: 166 RQIDRNRSDENT-CRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTF 224
Query: 202 ESREKCEQIIQMFN 215
ESR+ + I N
Sbjct: 225 ESRDDAARAIAELN 238
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 39.5 bits (88), Expect = 0.004
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
+++R + P+ D +L+Q+C YG + + + K K FV++E ASA A V G+
Sbjct: 123 VHVRNIPPDLVDVELMQLCIQYGPVSNYMML------KGKSQAFVEYEEEASAAAFVSGM 176
Query: 126 QAKGVQ 131
A +Q
Sbjct: 177 TAVPIQ 182
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 39.1 bits (87), Expect = 0.005
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 153 PTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQI 210
P +++ P E ++ + KF V ++++ GQSKG GF E+ ++ E+I
Sbjct: 65 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEI 122
Score = 35.9 bits (79), Expect = 0.044
Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 60 QLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAE 119
+L +++ G +TT+ +L + + + ++ K + + + KGYGF+ FET AE
Sbjct: 62 ELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAE 120
Query: 120 AAVKGLQAKGVQAQMAKVGIW-FLRRLNRQQEQ 151
++ L K ++ + K+ + +R++N Q
Sbjct: 121 -EIRKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 152
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 39.1 bits (87), Expect = 0.005
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 153 PTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQI 210
P +++ P E ++ + KF V ++++ GQSKG GF E+ ++ E+I
Sbjct: 66 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEI 123
Score = 35.9 bits (79), Expect = 0.044
Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 60 QLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAE 119
+L +++ G +TT+ +L + + + ++ K + + + KGYGF+ FET AE
Sbjct: 63 ELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAE 121
Query: 120 AAVKGLQAKGVQAQMAKVGIW-FLRRLNRQQEQ 151
++ L K ++ + K+ + +R++N Q
Sbjct: 122 -EIRKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 153
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 38.3 bits (85), Expect = 0.008
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 61 LSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEA 120
+S ++Y+ TT+ DL G++ + + + D+ T + +G+ FV+F A+A+
Sbjct: 1 MSGFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQR 60
Query: 121 AV 122
AV
Sbjct: 61 AV 62
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 155 NLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTH-GQSKGVGFARMESREKCEQIIQM 213
++Y+ N P E+D+ ++ G V + RI+ D G+ +G F ++ +
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 214 FNG 216
FNG
Sbjct: 65 FNG 67
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 38.3 bits (85), Expect = 0.008
Identities = 15/73 (20%), Positives = 36/73 (49%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
+Y+ + P+ ++ DL + + +G I+ + +G+G+++F + S A+ G+
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 126 QAKGVQAQMAKVG 138
+ Q +VG
Sbjct: 269 NMFDLGGQYLRVG 281
Score = 33.1 bits (72), Expect = 0.31
Identities = 32/168 (19%), Positives = 67/168 (39%), Gaps = 16/168 (9%)
Query: 64 TNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVK 123
+ +Y+ +S + L + +G I S D T K + FV++E +A A +
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 124 GLQAKGVQAQMAKVGIWFLRRL----NRQQEQDPTNL-----------YMANLPPHFKEN 168
+ + + + KV + + N Q Q ++ Y++++ P E
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 169 DVDQLLAKFGQVVSTRILRDTHGQS-KGVGFARMESREKCEQIIQMFN 215
D+ + FG++V ++ R G+ +G G+ + + I N
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 38.3 bits (85), Expect = 0.008
Identities = 15/73 (20%), Positives = 36/73 (49%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
+Y+ + P+ ++ DL + + +G I+ + +G+G+++F + S A+ G+
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 126 QAKGVQAQMAKVG 138
+ Q +VG
Sbjct: 269 NMFDLGGQYLRVG 281
Score = 33.1 bits (72), Expect = 0.31
Identities = 32/168 (19%), Positives = 67/168 (39%), Gaps = 16/168 (9%)
Query: 64 TNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVK 123
+ +Y+ +S + L + +G I S D T K + FV++E +A A +
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 124 GLQAKGVQAQMAKVGIWFLRRL----NRQQEQDPTNL-----------YMANLPPHFKEN 168
+ + + + KV + + N Q Q ++ Y++++ P E
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 169 DVDQLLAKFGQVVSTRILRDTHGQS-KGVGFARMESREKCEQIIQMFN 215
D+ + FG++V ++ R G+ +G G+ + + I N
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAA 121
L++ L+P TTD+DL + +G I + + + D+ + Y F++F+ S E A
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Score = 36.7 bits (81), Expect = 0.025
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 117 SAEAAVKGLQAKGVQAQMAKVGIWFLRRLNRQQEQDPTN-LYMANLPPHFKENDVDQLLA 175
+AE + LQ + + A+ A++ + + L E P N L++ L P + D++ + +
Sbjct: 205 TAEEIAEELQQREM-AEQAQI-LEMVGDLKDADEVPPENVLFVCKLNPVTTDEDLEIIFS 262
Query: 176 KFGQVVSTRILRDTH-GQSKGVGFARMESREKCEQ 209
+FG++ + I+RD G S F ++ + CEQ
Sbjct: 263 RFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAA 121
L++ L+P TTD+DL + +G I + + + D+ + Y F++F+ S E A
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Score = 36.7 bits (81), Expect = 0.025
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 117 SAEAAVKGLQAKGVQAQMAKVGIWFLRRLNRQQEQDPTN-LYMANLPPHFKENDVDQLLA 175
+AE + LQ + + A+ A++ + + L E P N L++ L P + D++ + +
Sbjct: 205 TAEEIAEELQQREM-AEQAQI-LEMVGDLKDADEVPPENVLFVCKLNPVTTDEDLEIIFS 262
Query: 176 KFGQVVSTRILRDTH-GQSKGVGFARMESREKCEQ 209
+FG++ + I+RD G S F ++ + CEQ
Sbjct: 263 RFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAA 121
L++ L+P TTD+DL + +G I + + + D+ + Y F++F+ S E A
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 229
Score = 36.7 bits (81), Expect = 0.025
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 117 SAEAAVKGLQAKGVQAQMAKVGIWFLRRLNRQQEQDPTN-LYMANLPPHFKENDVDQLLA 175
+AE + LQ + + A+ A++ + + L E P N L++ L P + D++ + +
Sbjct: 136 TAEEIAEELQQREM-AEQAQI-LEMVGDLKDADEVPPENVLFVCKLNPVTTDEDLEIIFS 193
Query: 176 KFGQVVSTRILRDTH-GQSKGVGFARMESREKCEQ 209
+FG++ + I+RD G S F ++ + CEQ
Sbjct: 194 RFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
>Z68507-6|CAA92829.1| 240|Caenorhabditis elegans Hypothetical
protein M18.7a protein.
Length = 240
Score = 37.5 bits (83), Expect = 0.014
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 146 NRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESRE 205
+R + + ++NL P +D+++L + ++ S + + HG S G G + R+
Sbjct: 66 SRGNDSKVIRVNISNLAPTVISSDLEELFGDY-RLSSVSVNFNEHGDSLGTGDISLTKRD 124
Query: 206 KCEQIIQMFNGNPIPGAKEPLLVKFA-----------DGGNKKKSSYKQNESNGRTWRDN 254
E+++Q F+G + G ++KFA D GN+ +SS ++ ++
Sbjct: 125 -AERLVQKFSGVALDGK----IMKFAVIDSSNMAGRVDFGNRSRSSPGRSSRGFQSGPRR 179
Query: 255 SETITQAAMAVSGVYAGTMSAGGAGGECAGVYRSSG 290
+ + + GV+AG + GGAG G +R G
Sbjct: 180 NNGKPEDFLR-DGVHAGDIKRGGAG---RGGFRKGG 211
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 37.1 bits (82), Expect = 0.019
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAA 121
L + LS TT+KDL + +G I + D+ + +G+GF+ F I A AA
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 143 RRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRD-THGQSKGVGF 198
++ +R+ Q L + NL + E D+ + +FG++ ++ D G S+G GF
Sbjct: 65 QQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGF 121
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 37.1 bits (82), Expect = 0.019
Identities = 16/75 (21%), Positives = 37/75 (49%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
++Y+ TT+++L G I + + + D+ T + +G+ F++F SA+ AV+
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 125 LQAKGVQAQMAKVGI 139
+ + +V +
Sbjct: 66 MNGAEFNGRPLRVNL 80
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 155 NLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTH-GQSKGVGFARMESREKCEQIIQM 213
++Y+ N P E ++ + GQ+ + RI+ D G+ +G F ++ ++
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 214 FNGNPIPGAKEPLLVKFAD 232
NG G PL V A+
Sbjct: 66 MNGAEFNG--RPLRVNLAN 82
>Z32683-13|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 36.7 bits (81), Expect = 0.025
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
+++ + T+ D+ YG I + LD+ T KGY V++ET A A+
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 126 QAKGVQAQMAKVGIWFLR 143
+ Q KV F++
Sbjct: 117 NDTDLLGQNVKVDWCFVK 134
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 36.7 bits (81), Expect = 0.025
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 71 LSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGLQAKGV 130
L +D+ L + + Y S K + + TNK KGYGFV F A++ + K V
Sbjct: 210 LGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREMDGKYV 269
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 35.9 bits (79), Expect = 0.044
Identities = 34/187 (18%), Positives = 78/187 (41%), Gaps = 6/187 (3%)
Query: 62 SRTNLYIRGLSPNTTDKDLVQMCQMYGSI-ISTKAILDKNTNKCKGYGFVDFETIASAEA 120
++ L+I + + T++ L Q+ G K + K+ + KGY F++F T A
Sbjct: 66 AQRTLWIGDVPTDWTEETLSQVFTECGHAPYKVKRVYVKD--ELKGYCFIEFITFDEARQ 123
Query: 121 AVKGLQAKGVQA-QMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQ 179
+ L + + + + F + NL+++++P + ++ ++ K+
Sbjct: 124 TLYDLNGNRIPGFKDIRFNLCFAN--DSYNPNSEFNLHVSSVPDDMADAELYRIFDKYQS 181
Query: 180 VVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKS 239
++ R G SKG GF R ++ + + + + G + L + + G +
Sbjct: 182 CRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVEMHRTKVGGCRIILKLAGSRGERLDRG 241
Query: 240 SYKQNES 246
+Q +S
Sbjct: 242 ESRQFKS 248
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 35.5 bits (78), Expect = 0.058
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYG 108
NL+I L + D DL+ +G I+S K +DK TN K +G
Sbjct: 77 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFG 120
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 152 DPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRD 188
D NL++ +LP F ++D+ A FG ++S ++ D
Sbjct: 74 DGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFID 110
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 68 IRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKC-KGYGFVDFETIASAEAAVKGLQ 126
I+ LS N L ++ +YG+I + D+ N +GYG+V+++ + AE ++K +
Sbjct: 137 IKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKHMD 196
Query: 127 AKGVQAQMAKV 137
+ V
Sbjct: 197 GGQIDGMAVHV 207
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 34.7 bits (76), Expect = 0.10
Identities = 12/60 (20%), Positives = 31/60 (51%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
+Y+ + P+ ++ DL + + +G I+ + +G+G+++F + S A+ G+
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Score = 33.1 bits (72), Expect = 0.31
Identities = 32/168 (19%), Positives = 67/168 (39%), Gaps = 16/168 (9%)
Query: 64 TNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVK 123
+ +Y+ +S + L + +G I S D T K + FV++E +A A +
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 124 GLQAKGVQAQMAKVGIWFLRRL----NRQQEQDPTNL-----------YMANLPPHFKEN 168
+ + + + KV + + N Q Q ++ Y++++ P E
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 169 DVDQLLAKFGQVVSTRILRDTHGQS-KGVGFARMESREKCEQIIQMFN 215
D+ + FG++V ++ R G+ +G G+ + + I N
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/73 (20%), Positives = 36/73 (49%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKG 124
++Y+ + T++++ G + + + + D+ T + +G+ FV+F A A+ AV+
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 125 LQAKGVQAQMAKV 137
L + +V
Sbjct: 67 LNGVAFNGRNLRV 79
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/94 (26%), Positives = 32/94 (34%), Gaps = 5/94 (5%)
Query: 191 GQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKSSYKQNESNGRT 250
G+ KG +Q I M+NG P PG P+ + A K + E GR
Sbjct: 245 GEPKGECMITFVDASAAQQAITMYNGQPFPGGSSPMSISLA-----KFRADAGGERGGRG 299
Query: 251 WRDNSETITQAAMAVSGVYAGTMSAGGAGGECAG 284
R M G + G G GG G
Sbjct: 300 GRGGFGGGRGGPMGGRGGFGGDRGGYGGGGGRGG 333
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 34.3 bits (75), Expect = 0.13
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 64 TNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVK 123
+N+++RG+S + D +L Q +G I T ++ + GYGFV F+T A+A+ +
Sbjct: 96 SNVFVRGISRDMPDTELYQA---FGGI--TDGVVQCHV--ADGYGFVLFDTRANAQKKIV 148
Query: 124 GLQAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVST 183
+ K + ++ V W ++ + P M+ P D+ LL Q +T
Sbjct: 149 EMDGKTLNGKLISVS-WARPDTVGRKRKRP----MSEESPTPSSTDLGLLLFSNVQTATT 203
Query: 184 RI 185
+I
Sbjct: 204 KI 205
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 33.1 bits (72), Expect = 0.31
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
+YI L+ ++KD+ + YG I + +L KN G+GFV+F+ AE AV L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI---RDVLLKN-----GFGFVEFDDKRDAEDAVHDL 56
Query: 126 QAK 128
K
Sbjct: 57 NGK 59
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 33.1 bits (72), Expect = 0.31
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
+YI L+ ++KD+ + YG I + +L KN G+GFV+F+ AE AV L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI---RDVLLKN-----GFGFVEFDDKRDAEDAVHDL 56
Query: 126 QAK 128
K
Sbjct: 57 NGK 59
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 33.1 bits (72), Expect = 0.31
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
+YI L+ ++KD+ + YG I + +L KN G+GFV+F+ AE AV L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI---RDVLLKN-----GFGFVEFDDKRDAEDAVHDL 56
Query: 126 QAK 128
K
Sbjct: 57 NGK 59
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 33.1 bits (72), Expect = 0.31
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 173 LLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFAD 232
+ K G VV I+ + G SKG GF M++ + ++ FNG I G + + +
Sbjct: 1 MFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
Query: 233 GGNKK 237
NKK
Sbjct: 60 VHNKK 64
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 32.7 bits (71), Expect = 0.41
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 60 QLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNK-CKGYGFVDFETIASA 118
+L L IR L T +DL +C G + + K C G+GF+ F A A
Sbjct: 91 KLKEWRLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADA 150
Query: 119 E 119
E
Sbjct: 151 E 151
Score = 28.3 bits (60), Expect = 8.8
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 142 LRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSK---GVGF 198
+R+ Q + L + NLP K+ D+ L + G+ V +L + K G GF
Sbjct: 83 IRKRFEQAKLKEWRLIIRNLPFKTKKEDLQNLCSNIGKFVEI-VLPPSRKDPKTCAGFGF 141
Query: 199 ARMESREKCEQIIQMFNGNPIPG 221
+ + E+ + FN N + G
Sbjct: 142 IQFVEKADAEKGREFFNTNKVLG 164
>Z66521-9|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 32.7 bits (71), Expect = 0.41
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 11/119 (9%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
+YI L +D+D+ + YG + ++ KN G+GFVDF+ A+ AV L
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSD---VIMKN-----GFGFVDFQDQRDADDAVHDL 55
Query: 126 QAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTR 184
K + + +V + F RR E+ + + P F++ Q ++ + STR
Sbjct: 56 NGKELCGE--RVILEFPRRKVGYNEERSGSGFRGR-EPTFRKGGERQFSNRYSRPCSTR 111
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 31.9 bits (69), Expect = 0.71
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAV 122
+++I + N+T +++ + + G I+ T DK T K K + +++F+ +S E A+
Sbjct: 56 SVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 113
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 31.9 bits (69), Expect = 0.71
Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Query: 156 LYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFN 215
+Y+ NLP +E +V+ + K+G++ I G+ F E E ++ +
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYVDI---KSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 216 GNPIPGAKEPLLVKFADGGNKKKSSYKQNESNG 248
G G + + V+F G + S + + G
Sbjct: 68 GYEFDGRR--IRVEFTRGVGPRGPSGRPLQDGG 98
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 31.5 bits (68), Expect = 0.94
Identities = 12/49 (24%), Positives = 28/49 (57%)
Query: 77 DKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGL 125
+K+L+ + +G+++ + ++ T KG+ +V F+ A AE A + +
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESM 93
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 147 RQQEQDPTNLYMANLPPHFKEND--VDQLLAKFGQVVSTRILRDTHGQSKGVGFARMES 203
R E+D + + L FK D + G VV I R + G SKG GF RM S
Sbjct: 164 RAVERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSS 222
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 156 LYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFN 215
LY+ +P + +E DV++ L +G++ + G F E E +
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKI-------NNISMKYGFAFVDFEDSRDAEDACHDLD 56
Query: 216 GNPIPGAKEPLLVKFADG---GNKKKSSYKQNESNGRTWRDNSET 257
G + G+ L+V+ A G GN + S + R+ R S T
Sbjct: 57 GKTMEGSSMRLVVEMARGKPRGNDRHGS-RSPRRRSRSPRRRSRT 100
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 156 LYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFN 215
LY+ +P + +E DV++ L +G++ + G F E E +
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKI-------NNISMKYGFAFVDFEDSRDAEDACHDLD 56
Query: 216 GNPIPGAKEPLLVKFADG---GNKKKSSYKQNESNGRTWRDNSET 257
G + G+ L+V+ A G GN + S + R+ R S T
Sbjct: 57 GKTMEGSSMRLVVEMARGKPRGNDRHGS-RSPRRRSRSPRRRSRT 100
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 156 LYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFN 215
LY+ +P + +E DV++ L +G++ + G F E E +
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKI-------NNISMKYGFAFVDFEDSRDAEDACHDLD 56
Query: 216 GNPIPGAKEPLLVKFADG---GNKKKSSYKQNESNGRTWRDNSET 257
G + G+ L+V+ A G GN + S + R+ R S T
Sbjct: 57 GKTMEGSSMRLVVEMARGKPRGNDRHGS-RSPRRRSRSPRRRSRT 100
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 156 LYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFN 215
+Y+ NLP +E +V+ + K+G++ I G+ F E E ++ +
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYVDI---KSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 216 GNPIPGAKEPLLVKFADG 233
G G + + V+F G
Sbjct: 68 GYEFDGRR--IRVEFTRG 83
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 65 NLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAV 122
+++I + N+T +++ + + G I+ T DK T K K + +++F+ +S E A+
Sbjct: 62 SVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 119
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 156 LYMANLPPHFKENDVDQLLA-KFGQVVSTRILRDTHGQSKG---VGFARMESREKCEQII 211
+++ N+ + D+ L+ K G+V +L D +G+ KG V F E EKC + +
Sbjct: 47 VFITNIAYEARWVDLKSLVREKGGEVAFCELLEDRNGKPKGNAVVEFETREGAEKCVENL 106
Query: 212 QMFN 215
Q F+
Sbjct: 107 QKFD 110
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 75 TTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAV 122
T D + G + + + + DK+T K KG+ FV+F+ +S A+
Sbjct: 258 TEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL 305
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 30.3 bits (65), Expect = 2.2
Identities = 55/267 (20%), Positives = 97/267 (36%), Gaps = 42/267 (15%)
Query: 61 LSRTNLYIRGLSPNTTDKD-LVQMCQMY--GSI-ISTKAILDKNTNKCKGYGFVDFETIA 116
++ T L+I G P T KD +++ + + G + + ++ D K +G+ FVDF
Sbjct: 278 IANTRLFI-GNIPKTKSKDEILEELKTHAEGVVDVIVYSVPDNEKIKNRGFCFVDFIDHK 336
Query: 117 SAEAAVKGLQAKGVQAQMAKVGIWFLRRLNRQQEQDPTN---LYMANLPPHFKENDVDQL 173
+A + + ++ A V + + E + LY+ N+ E +++L
Sbjct: 337 TASDIKRKIAQHKIRPFNADVYVDWAEHQEEPDEDTMSKVKVLYIRNIKEAVTEEKLNEL 396
Query: 174 LAKFGQVVSTRILRDTHGQSKGVGFARMESREKCEQIIQMFNGNPIPG-------AKEPL 226
++ + + ++D F R+ C + ++ +NG + G AK P
Sbjct: 397 FKEYASLDRVKKVKD-------YAFIHFNERDDCLKAMEEWNGKELEGTVVEASLAKPPQ 449
Query: 227 LVK---------FAD-GGNKKKSSYKQNESNGRTWRDNS----------ETITQAAMAVS 266
K F GG + + G W N+ M
Sbjct: 450 EKKKKPVMRGRGFGGAGGGAGNHGQRGGQRGGGQWGGNAGPGGYYPNHFNNGYDMPMPWG 509
Query: 267 GVYAGTMSAGGAGGECAGVYRSSGVYG 293
G Y G M G GG G Y G YG
Sbjct: 510 GGYGGDMGYGAYGGGYGGGYGGPGAYG 536
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 66 LYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIASAEAAVK 123
+Y+ + + + LV + + G I + ++D + +GY FV + A AA K
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAK 259
>Z69884-10|CAA93753.1| 400|Caenorhabditis elegans Hypothetical
protein C27C12.3 protein.
Length = 400
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 58 VEQLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIAS 117
V L+R+ LY + + P + + D ++ Q Y +S L++ K + E IAS
Sbjct: 136 VFHLARSQLYFQ-MPPTSIESDFEKIFQQYFGKLSMHHCLERTETLNKLFAGCSIEEIAS 194
Query: 118 AE 119
AE
Sbjct: 195 AE 196
>Z69883-7|CAA93745.1| 400|Caenorhabditis elegans Hypothetical
protein C27C12.3 protein.
Length = 400
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 58 VEQLSRTNLYIRGLSPNTTDKDLVQMCQMYGSIISTKAILDKNTNKCKGYGFVDFETIAS 117
V L+R+ LY + + P + + D ++ Q Y +S L++ K + E IAS
Sbjct: 136 VFHLARSQLYFQ-MPPTSIESDFEKIFQQYFGKLSMHHCLERTETLNKLFAGCSIEEIAS 194
Query: 118 AE 119
AE
Sbjct: 195 AE 196
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 28.7 bits (61), Expect = 6.7
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 14/102 (13%)
Query: 145 LNRQQEQDPTNLYMANLPPHFKENDVDQLLAK------FGQVVSTRILRDTHGQSKGVGF 198
+N Q +YMAN E DV +++A FGQV T I + T+G G
Sbjct: 100 INDNSPQFEQPIYMANTTASGDERDVVKVVATDVDSGAFGQVTYT-IAQVTNG---GEDK 155
Query: 199 ARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKSS 240
R E+ + + GN +PG + ++++ DGG + +
Sbjct: 156 FRYETATN----MLVATGNLVPGERYQVVIEAIDGGGRSSQA 193
>U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family
protein 5, isoforma protein.
Length = 1544
Score = 28.7 bits (61), Expect = 6.7
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 14/102 (13%)
Query: 145 LNRQQEQDPTNLYMANLPPHFKENDVDQLLAK------FGQVVSTRILRDTHGQSKGVGF 198
+N Q +YMAN E DV +++A FGQV T I + T+G G
Sbjct: 100 INDNSPQFEQPIYMANTTASGDERDVVKVVATDVDSGAFGQVTYT-IAQVTNG---GEDK 155
Query: 199 ARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKSS 240
R E+ + + GN +PG + ++++ DGG + +
Sbjct: 156 FRYETATN----MLVATGNLVPGERYQVVIEAIDGGGRSSQA 193
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 150 EQDP--TNLYMANLPPHFKENDVDQLLAKFGQVVSTRIL 186
+ DP TN+Y++N+P E+D+ FG + + +IL
Sbjct: 194 DDDPYTTNVYVSNIPHSVTEDDLLFTFGSFGPLAALKIL 232
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.132 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,443,099
Number of Sequences: 27539
Number of extensions: 240908
Number of successful extensions: 978
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 709
Number of HSP's gapped (non-prelim): 212
length of query: 356
length of database: 12,573,161
effective HSP length: 82
effective length of query: 274
effective length of database: 10,314,963
effective search space: 2826299862
effective search space used: 2826299862
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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