Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005355-TA|BGIBMGA005355-PA|undefined
(100 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY358518-1|AAQ88882.1| 447|Homo sapiens TBL2 protein. 56 2e-08
AK074619-1|BAC11093.1| 447|Homo sapiens protein ( Homo sapiens ... 56 2e-08
AF097485-1|AAF06824.1| 447|Homo sapiens transducin beta-like 2 ... 56 2e-08
AF097484-1|AAF06823.1| 447|Homo sapiens transducin beta-like 2 ... 56 2e-08
AF056183-1|AAD28083.1| 426|Homo sapiens WS beta-transducin repe... 56 2e-08
BC012938-1|AAH12938.1| 446|Homo sapiens TBL2 protein protein. 50 2e-06
BC110582-1|AAI10583.1| 1006|Homo sapiens mindbomb homolog 1 (Dro... 33 0.11
BC110581-1|AAI10582.1| 1006|Homo sapiens mindbomb homolog 1 (Dro... 33 0.11
BC022403-1|AAH22403.1| 395|Homo sapiens MIB1 protein protein. 33 0.11
AY149908-1|AAN75493.1| 1006|Homo sapiens mind bomb protein. 33 0.11
AY147849-1|AAN18023.1| 997|Homo sapiens MINDBOMB protein. 33 0.11
AK075157-1|BAC11439.1| 286|Homo sapiens protein ( Homo sapiens ... 33 0.11
AB037744-1|BAA92561.1| 396|Homo sapiens KIAA1323 protein protein. 33 0.11
AL833836-1|CAD38696.1| 996|Homo sapiens hypothetical protein pr... 31 0.57
AL357336-4|CAI40458.1| 513|Homo sapiens novel protein protein. 31 0.57
AL357336-3|CAI40457.1| 996|Homo sapiens novel protein protein. 31 0.57
AL139341-1|CAI17220.1| 996|Homo sapiens novel protein protein. 31 0.57
AK093325-1|BAC04133.1| 450|Homo sapiens protein ( Homo sapiens ... 31 0.57
X52009-1|CAA36258.1| 449|Homo sapiens inhibitory glycine recept... 29 1.7
BC114967-1|AAI14968.1| 366|Homo sapiens GLRA1 protein protein. 29 1.7
BC114947-1|AAI14948.1| 457|Homo sapiens GLRA1 protein protein. 29 1.7
BC074980-1|AAH74980.1| 449|Homo sapiens glycine receptor, alpha... 29 1.7
M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl ... 28 5.3
D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein. 28 5.3
BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate sy... 28 5.3
AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate sy... 28 5.3
>AY358518-1|AAQ88882.1| 447|Homo sapiens TBL2 protein.
Length = 447
Score = 55.6 bits (128), Expect = 2e-08
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 25 ENLCGGLVNYMKFDASGQYLFVCGDRVVRVLHNVCGYFTTIESCKRLLKSKQTSATVERL 84
E + G + + FD +G++L CGDR VR+ HN G+ +E + LK +T +RL
Sbjct: 369 ERVHGECIANLSFDITGRFLASCGDRAVRLFHNTPGHRAMVEEMQGHLKRASNESTRQRL 428
Query: 85 HKTIQDCKQTLKKFG 99
+ + ++TLK G
Sbjct: 429 QQQLTQAQETLKSLG 443
>AK074619-1|BAC11093.1| 447|Homo sapiens protein ( Homo sapiens
cDNA FLJ90138 fis, clone HEMBB1000905, weakly similar to
TRANSCRIPTIONAL REPRESSOR RCO-1. ).
Length = 447
Score = 55.6 bits (128), Expect = 2e-08
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 25 ENLCGGLVNYMKFDASGQYLFVCGDRVVRVLHNVCGYFTTIESCKRLLKSKQTSATVERL 84
E + G + + FD +G++L CGDR VR+ HN G+ +E + LK +T +RL
Sbjct: 369 ERVHGECIANLSFDITGRFLASCGDRAVRLFHNTPGHRAMVEEMQGHLKRASNESTRQRL 428
Query: 85 HKTIQDCKQTLKKFG 99
+ + ++TLK G
Sbjct: 429 QQQLTQAQETLKSLG 443
>AF097485-1|AAF06824.1| 447|Homo sapiens transducin beta-like 2
protein.
Length = 447
Score = 55.6 bits (128), Expect = 2e-08
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 25 ENLCGGLVNYMKFDASGQYLFVCGDRVVRVLHNVCGYFTTIESCKRLLKSKQTSATVERL 84
E + G + + FD +G++L CGDR VR+ HN G+ +E + LK +T +RL
Sbjct: 369 ERVHGECIANLSFDITGRFLASCGDRAVRLFHNTPGHRAMVEEMQGHLKRASNESTRQRL 428
Query: 85 HKTIQDCKQTLKKFG 99
+ + ++TLK G
Sbjct: 429 QQQLTQAQETLKSLG 443
>AF097484-1|AAF06823.1| 447|Homo sapiens transducin beta-like 2
protein.
Length = 447
Score = 55.6 bits (128), Expect = 2e-08
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 25 ENLCGGLVNYMKFDASGQYLFVCGDRVVRVLHNVCGYFTTIESCKRLLKSKQTSATVERL 84
E + G + + FD +G++L CGDR VR+ HN G+ +E + LK +T +RL
Sbjct: 369 ERVHGECIANLSFDITGRFLASCGDRAVRLFHNTPGHRAMVEEMQGHLKRASNESTRQRL 428
Query: 85 HKTIQDCKQTLKKFG 99
+ + ++TLK G
Sbjct: 429 QQQLTQAQETLKSLG 443
>AF056183-1|AAD28083.1| 426|Homo sapiens WS beta-transducin repeats
protein protein.
Length = 426
Score = 55.6 bits (128), Expect = 2e-08
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 25 ENLCGGLVNYMKFDASGQYLFVCGDRVVRVLHNVCGYFTTIESCKRLLKSKQTSATVERL 84
E + G + + FD +G++L CGDR VR+ HN G+ +E + LK +T +RL
Sbjct: 348 ERVHGECIANLSFDITGRFLASCGDRAVRLFHNTPGHRAMVEEMQGHLKRASNESTRQRL 407
Query: 85 HKTIQDCKQTLKKFG 99
+ + ++TLK G
Sbjct: 408 QQQLTQAQETLKSLG 422
>BC012938-1|AAH12938.1| 446|Homo sapiens TBL2 protein protein.
Length = 446
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 25 ENLCGGLVNYMKFDASGQYLFVCGDRVVRVLHNVCGYFTTIESCKRLLKSKQTSATVERL 84
E + G + + FD +G++L CGDR VR+ HN G+ +E + LK +T +RL
Sbjct: 369 ERVHGECIANLSFDITGRFLASCGDRAVRLFHNTPGHRAMVEEMQGHLKRASNESTRQRL 428
Query: 85 HKTIQDCKQTL 95
+ + + TL
Sbjct: 429 QQQLTQAQVTL 439
>BC110582-1|AAI10583.1| 1006|Homo sapiens mindbomb homolog 1
(Drosophila) protein.
Length = 1006
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 46 VCGDRVVRVLHNVCGYFTTIESCKRLLKS-KQTSATVERLHKTIQDC 91
VC D+ VL CG+ E+C L+K Q A VER I C
Sbjct: 868 VCSDKKAAVLFQPCGHMCACENCANLMKKCVQCRAVVERRVPFIMCC 914
>BC110581-1|AAI10582.1| 1006|Homo sapiens mindbomb homolog 1
(Drosophila) protein.
Length = 1006
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 46 VCGDRVVRVLHNVCGYFTTIESCKRLLKS-KQTSATVERLHKTIQDC 91
VC D+ VL CG+ E+C L+K Q A VER I C
Sbjct: 868 VCSDKKAAVLFQPCGHMCACENCANLMKKCVQCRAVVERRVPFIMCC 914
>BC022403-1|AAH22403.1| 395|Homo sapiens MIB1 protein protein.
Length = 395
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 46 VCGDRVVRVLHNVCGYFTTIESCKRLLKS-KQTSATVERLHKTIQDC 91
VC D+ VL CG+ E+C L+K Q A VER I C
Sbjct: 257 VCSDKKAAVLFQPCGHMCACENCANLMKKCVQCRAVVERRVPFIMCC 303
>AY149908-1|AAN75493.1| 1006|Homo sapiens mind bomb protein.
Length = 1006
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 46 VCGDRVVRVLHNVCGYFTTIESCKRLLKS-KQTSATVERLHKTIQDC 91
VC D+ VL CG+ E+C L+K Q A VER I C
Sbjct: 868 VCSDKKAAVLFQPCGHMCACENCANLMKKCVQCRAVVERRVPFIMCC 914
>AY147849-1|AAN18023.1| 997|Homo sapiens MINDBOMB protein.
Length = 997
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 46 VCGDRVVRVLHNVCGYFTTIESCKRLLKS-KQTSATVERLHKTIQDC 91
VC D+ VL CG+ E+C L+K Q A VER I C
Sbjct: 859 VCSDKKAAVLFQPCGHMCACENCANLMKKCVQCRAVVERRVPFIMCC 905
>AK075157-1|BAC11439.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ90676 fis, clone PLACE1005682, weakly similar to
B-CELL LYMPHOMA 3-ENCODED PROTEIN. ).
Length = 286
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 46 VCGDRVVRVLHNVCGYFTTIESCKRLLKS-KQTSATVERLHKTIQDC 91
VC D+ VL CG+ E+C L+K Q A VER I C
Sbjct: 148 VCSDKKAAVLFQPCGHMCACENCANLMKKCVQCRAVVERRVPFIMCC 194
>AB037744-1|BAA92561.1| 396|Homo sapiens KIAA1323 protein protein.
Length = 396
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 46 VCGDRVVRVLHNVCGYFTTIESCKRLLKS-KQTSATVERLHKTIQDC 91
VC D+ VL CG+ E+C L+K Q A VER I C
Sbjct: 258 VCSDKKAAVLFQPCGHMCACENCANLMKKCVQCRAVVERRVPFIMCC 304
>AL833836-1|CAD38696.1| 996|Homo sapiens hypothetical protein
protein.
Length = 996
Score = 31.1 bits (67), Expect = 0.57
Identities = 12/27 (44%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 75 KQTSATVERLHK-TIQDCKQTLKKFGK 100
+QT A ++++HK +++CK+ LKK GK
Sbjct: 882 EQTIAVLDKMHKKNVENCKKLLKKLGK 908
>AL357336-4|CAI40458.1| 513|Homo sapiens novel protein protein.
Length = 513
Score = 31.1 bits (67), Expect = 0.57
Identities = 12/27 (44%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 75 KQTSATVERLHK-TIQDCKQTLKKFGK 100
+QT A ++++HK +++CK+ LKK GK
Sbjct: 399 EQTIAVLDKMHKKNVENCKKLLKKLGK 425
>AL357336-3|CAI40457.1| 996|Homo sapiens novel protein protein.
Length = 996
Score = 31.1 bits (67), Expect = 0.57
Identities = 12/27 (44%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 75 KQTSATVERLHK-TIQDCKQTLKKFGK 100
+QT A ++++HK +++CK+ LKK GK
Sbjct: 882 EQTIAVLDKMHKKNVENCKKLLKKLGK 908
>AL139341-1|CAI17220.1| 996|Homo sapiens novel protein protein.
Length = 996
Score = 31.1 bits (67), Expect = 0.57
Identities = 12/27 (44%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 75 KQTSATVERLHK-TIQDCKQTLKKFGK 100
+QT A ++++HK +++CK+ LKK GK
Sbjct: 882 EQTIAVLDKMHKKNVENCKKLLKKLGK 908
>AK093325-1|BAC04133.1| 450|Homo sapiens protein ( Homo sapiens
cDNA FLJ36006 fis, clone TESTI2015437. ).
Length = 450
Score = 31.1 bits (67), Expect = 0.57
Identities = 12/27 (44%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 75 KQTSATVERLHK-TIQDCKQTLKKFGK 100
+QT A ++++HK +++CK+ LKK GK
Sbjct: 336 EQTIAVLDKMHKKNVENCKKLLKKLGK 362
>X52009-1|CAA36258.1| 449|Homo sapiens inhibitory glycine receptor
protein.
Length = 449
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 3 ALGTGPVCPYGKDGIGCGGVNDEN 26
A G GP C KDGI G N+ N
Sbjct: 366 AYGMGPACLQAKDGISVKGANNSN 389
>BC114967-1|AAI14968.1| 366|Homo sapiens GLRA1 protein protein.
Length = 366
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 3 ALGTGPVCPYGKDGIGCGGVNDEN 26
A G GP C KDGI G N+ N
Sbjct: 283 AYGMGPACLQAKDGISVKGANNSN 306
>BC114947-1|AAI14948.1| 457|Homo sapiens GLRA1 protein protein.
Length = 457
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 3 ALGTGPVCPYGKDGIGCGGVNDEN 26
A G GP C KDGI G N+ N
Sbjct: 374 AYGMGPACLQAKDGISVKGANNSN 397
>BC074980-1|AAH74980.1| 449|Homo sapiens glycine receptor, alpha 1
(startle disease/hyperekplexia, stiff man syndrome)
protein.
Length = 449
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 3 ALGTGPVCPYGKDGIGCGGVNDEN 26
A G GP C KDGI G N+ N
Sbjct: 366 AYGMGPACLQAKDGISVKGANNSN 389
>M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl
pyrophosphate synthetase mRNA (hpt807), 3' end. ).
Length = 346
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 7 GPVCPYGKDGIGCGGVNDENL 27
G +C Y K G+G +ND NL
Sbjct: 107 GQICWYQKPGVGLDAINDANL 127
>D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein.
Length = 420
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 7 GPVCPYGKDGIGCGGVNDENL 27
G +C Y K G+G +ND NL
Sbjct: 181 GQICWYQKPGVGLDAINDANL 201
>BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 7 GPVCPYGKDGIGCGGVNDENL 27
G +C Y K G+G +ND NL
Sbjct: 180 GQICWYQKPGVGLDAINDANL 200
>AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 7 GPVCPYGKDGIGCGGVNDENL 27
G +C Y K G+G +ND NL
Sbjct: 180 GQICWYQKPGVGLDAINDANL 200
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.323 0.141 0.448
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,156,108
Number of Sequences: 224733
Number of extensions: 567778
Number of successful extensions: 1140
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1106
Number of HSP's gapped (non-prelim): 39
length of query: 100
length of database: 73,234,838
effective HSP length: 77
effective length of query: 23
effective length of database: 55,930,397
effective search space: 1286399131
effective search space used: 1286399131
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -