Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005353-TA|BGIBMGA005353-PA|IPR012337|Polynucleotidyl
transferase, Ribonuclease H fold, IPR013520|Exonuclease, RNase T and
DNA polymerase III, IPR006055|Exonuclease
(344 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF495523-1|AAN77012.1| 318|Homo sapiens exonuclease GOR protein. 176 8e-44
BC113453-1|AAI13454.2| 318|Homo sapiens REXO1L1 protein protein. 174 3e-43
BC112074-1|AAI12075.1| 347|Homo sapiens REXO1L2P protein protein. 174 3e-43
BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1... 169 2e-41
AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein. 169 2e-41
AF023669-1|AAC98149.1| 170|Homo sapiens GOR antigen protein. 97 8e-20
BC068503-1|AAH68503.1| 774|Homo sapiens LOC81691 protein protein. 84 6e-16
BC007646-1|AAH07646.1| 774|Homo sapiens exonuclease NEF-sp prot... 84 6e-16
AK057254-1|BAB71397.1| 443|Homo sapiens protein ( Homo sapiens ... 84 6e-16
AF332193-1|AAK17192.1| 774|Homo sapiens exonuclease NEF-sp prot... 84 6e-16
AC004381-4|AAC31668.1| 547|Homo sapiens Unknown gene product pr... 84 6e-16
BC020988-1|AAH20988.1| 325|Homo sapiens interferon stimulated e... 70 1e-11
BC014407-1|AAH14407.1| 209|Homo sapiens ISG20L1 protein protein. 70 1e-11
BC005164-1|AAH05164.1| 327|Homo sapiens ISG20L1 protein protein. 70 1e-11
AK022546-1|BAB14091.1| 209|Homo sapiens protein ( Homo sapiens ... 70 1e-11
AF327352-1|AAL56012.1| 325|Homo sapiens hypothetical protein SB... 70 1e-11
BC000575-1|AAH00575.1| 353|Homo sapiens ISG20L2 protein protein. 67 7e-11
AL590666-6|CAI16341.1| 353|Homo sapiens interferon stimulated e... 67 7e-11
AK022733-1|BAB14212.1| 353|Homo sapiens protein ( Homo sapiens ... 67 7e-11
BC009274-1|AAH09274.1| 422|Homo sapiens REX4, RNA exonuclease 4... 63 2e-09
AL158826-21|CAI12849.1| 422|Homo sapiens REX4, RNA exonuclease ... 63 2e-09
AK025493-1|BAB15152.1| 422|Homo sapiens protein ( Homo sapiens ... 63 2e-09
AF295774-1|AAG02123.1| 422|Homo sapiens XPMC2H protein. 63 2e-09
AF273304-1|AAF98162.1| 422|Homo sapiens XPMC2 protein protein. 63 2e-09
AL158826-19|CAI12848.1| 374|Homo sapiens REX4, RNA exonuclease ... 57 8e-08
X89773-1|CAA61915.2| 181|Homo sapiens isg20 protein. 52 3e-06
U88964-1|AAB53416.1| 181|Homo sapiens HEM45 protein. 52 3e-06
CR456942-1|CAG33223.1| 181|Homo sapiens ISG20 protein. 52 3e-06
BT006952-1|AAP35598.1| 181|Homo sapiens interferon stimulated g... 52 3e-06
BC007922-1|AAH07922.1| 181|Homo sapiens interferon stimulated e... 52 3e-06
AB209323-1|BAD92560.1| 188|Homo sapiens hypothetical protein FL... 42 0.004
BC024043-1|AAH24043.1| 1198|Homo sapiens ubiquitin specific pept... 40 0.013
AB107585-1|BAD02263.1| 1198|Homo sapiens PABP1-DEPENDENT POLY(A)... 40 0.013
AB014610-1|BAA31685.2| 1206|Homo sapiens KIAA0710 protein protein. 40 0.013
BC094885-1|AAH94885.1| 1202|Homo sapiens USP52 protein protein. 40 0.017
BC016341-1|AAH16341.1| 87|Homo sapiens ISG20 protein protein. 36 0.21
>AF495523-1|AAN77012.1| 318|Homo sapiens exonuclease GOR protein.
Length = 318
Score = 176 bits (429), Expect = 8e-44
Identities = 97/249 (38%), Positives = 133/249 (53%), Gaps = 28/249 (11%)
Query: 98 DAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVSSD-------SRYACCKSMLGSRGC 150
D+ +C RC + ++ G V+++ C YHWGRV S S+Y CC + GS GC
Sbjct: 51 DSSCRVCCRCGTEYLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGC 110
Query: 151 SVARSHVWSGTRPGMNGPLEG---------------------YVRARLELASIAVIAADG 189
VA+ HV G + ++G +E Y LEL + V+ AD
Sbjct: 111 QVAKQHVRDGRKESLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADM 170
Query: 190 RLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTDTILIGHALEN 249
R+VY + VKP + +VD+NTRFSG+ D+A+ + TL VQ +L F TILIGH+LE+
Sbjct: 171 RVVYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLES 230
Query: 250 DLRALKLLHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSNGHSPLEDARAAM 309
DL ALKL+HS VVDT L+PH GFP +Q NGH+ EDA A +
Sbjct: 231 DLLALKLIHSTVVDTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQNGHNSSEDANACL 290
Query: 310 DLVLLKVQQ 318
LV+ KV+Q
Sbjct: 291 QLVMWKVRQ 299
>BC113453-1|AAI13454.2| 318|Homo sapiens REXO1L1 protein protein.
Length = 318
Score = 174 bits (424), Expect = 3e-43
Identities = 96/249 (38%), Positives = 133/249 (53%), Gaps = 28/249 (11%)
Query: 98 DAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVSSD-------SRYACCKSMLGSRGC 150
D+ +C RC + ++ G V+++ C YHWGRV S S+Y CC + GS GC
Sbjct: 51 DSSCRVCCRCGTEYLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGC 110
Query: 151 SVARSHVWSGTRPGMNGPLEG---------------------YVRARLELASIAVIAADG 189
VA+ HV G + ++G +E Y LEL + V+ AD
Sbjct: 111 QVAKQHVRDGRKESLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADM 170
Query: 190 RLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTDTILIGHALEN 249
R+VY + VKP + +VD+NTRFSG+ D+A+ + TL VQ +L F TILIGH+LE+
Sbjct: 171 RVVYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLES 230
Query: 250 DLRALKLLHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSNGHSPLEDARAAM 309
DL ALKL+HS VVDT L+PH GFP +Q +GH+ EDA A +
Sbjct: 231 DLLALKLIHSTVVDTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACL 290
Query: 310 DLVLLKVQQ 318
LV+ KV+Q
Sbjct: 291 QLVMWKVRQ 299
>BC112074-1|AAI12075.1| 347|Homo sapiens REXO1L2P protein protein.
Length = 347
Score = 174 bits (424), Expect = 3e-43
Identities = 96/249 (38%), Positives = 133/249 (53%), Gaps = 28/249 (11%)
Query: 98 DAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVSSD-------SRYACCKSMLGSRGC 150
D+ +C RC + ++ G V+++ C YHWGRV S S+Y CC + GS GC
Sbjct: 80 DSSCRVCCRCGTEYLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGC 139
Query: 151 SVARSHVWSGTRPGMNGPLEG---------------------YVRARLELASIAVIAADG 189
VA+ HV G + ++G +E Y LEL + V+ AD
Sbjct: 140 QVAKQHVRDGRKESLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADM 199
Query: 190 RLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTDTILIGHALEN 249
R+VY + VKP + +VD+NTRFSG+ D+A+ + TL VQ +L F TILIGH+LE+
Sbjct: 200 RVVYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLES 259
Query: 250 DLRALKLLHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSNGHSPLEDARAAM 309
DL ALKL+HS VVDT L+PH GFP +Q +GH+ EDA A +
Sbjct: 260 DLLALKLIHSTVVDTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACL 319
Query: 310 DLVLLKVQQ 318
LV+ KV+Q
Sbjct: 320 QLVMWKVRQ 328
>BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1
homolog (S. cerevisiae) protein.
Length = 1221
Score = 169 bits (410), Expect = 2e-41
Identities = 98/274 (35%), Positives = 139/274 (50%), Gaps = 30/274 (10%)
Query: 74 PGSHSDSGRGSLGSTPRSDSDEEADAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVS 133
P H + G++ T ++ D+ C RC + ++ G +++E C YHWGR+
Sbjct: 945 PFPHPERPGGAIIFT--AEEKRPKDSSCRTCCRCGTEYLVSSSGRCIRDEECYYHWGRLR 1002
Query: 134 S-------DSRYACCKSMLGSRGCSVARSHVWSGTRPGMNG-------PLEG-------- 171
+++Y CC + GS GC VA+ HV G + + G L G
Sbjct: 1003 RNRVAGGWETQYMCCSAAAGSVGCQVAKQHVQDGRKERLEGFVKTFEKELSGDTHPGIYA 1062
Query: 172 ------YVRARLELASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTL 225
Y LEL + V+ D +VY + VKP + +VD+NTRFSG+ DLA + TL
Sbjct: 1063 LDCEMSYTTYGLELTRVTVVDTDVHVVYDTFVKPDNEIVDYNTRFSGVTEADLADTSVTL 1122
Query: 226 RDVQNDILGFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPHARGFPMXXXXXXXXX 285
RDVQ +L DTILIGH+LE+DL ALK++HS VVDT L+PH G P
Sbjct: 1123 RDVQAVLLSMFSADTILIGHSLESDLLALKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMA 1182
Query: 286 XXXXXTVQRGSNGHSPLEDARAAMDLVLLKVQQE 319
+Q +GHS EDA A M LV+ KV+++
Sbjct: 1183 DYLRQIIQDNVDGHSSSEDAGACMHLVIWKVRED 1216
>AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein.
Length = 1239
Score = 169 bits (410), Expect = 2e-41
Identities = 98/274 (35%), Positives = 139/274 (50%), Gaps = 30/274 (10%)
Query: 74 PGSHSDSGRGSLGSTPRSDSDEEADAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVS 133
P H + G++ T ++ D+ C RC + ++ G +++E C YHWGR+
Sbjct: 963 PFPHPERPGGAIIFT--AEEKRPKDSSCRTCCRCGTEYLVSSSGRCIRDEECYYHWGRLR 1020
Query: 134 S-------DSRYACCKSMLGSRGCSVARSHVWSGTRPGMNG-------PLEG-------- 171
+++Y CC + GS GC VA+ HV G + + G L G
Sbjct: 1021 RNRVAGGWETQYMCCSAAAGSVGCQVAKQHVQDGRKERLEGFVKTFEKELSGDTHPGIYA 1080
Query: 172 ------YVRARLELASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTL 225
Y LEL + V+ D +VY + VKP + +VD+NTRFSG+ DLA + TL
Sbjct: 1081 LDCEMSYTTYGLELTRVTVVDTDVHVVYDTFVKPDNEIVDYNTRFSGVTEADLADTSVTL 1140
Query: 226 RDVQNDILGFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPHARGFPMXXXXXXXXX 285
RDVQ +L DTILIGH+LE+DL ALK++HS VVDT L+PH G P
Sbjct: 1141 RDVQAVLLSMFSADTILIGHSLESDLLALKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMA 1200
Query: 286 XXXXXTVQRGSNGHSPLEDARAAMDLVLLKVQQE 319
+Q +GHS EDA A M LV+ KV+++
Sbjct: 1201 DYLRQIIQDNVDGHSSSEDAGACMHLVIWKVRED 1234
>AF023669-1|AAC98149.1| 170|Homo sapiens GOR antigen protein.
Length = 170
Score = 97.1 bits (231), Expect = 8e-20
Identities = 52/128 (40%), Positives = 71/128 (55%)
Query: 191 LVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTDTILIGHALEND 250
+VY + VKP + +VD+NTRF + D+A+ + L VQ L F+ TI GH++E D
Sbjct: 41 VVYDTXVKPDNEIVDYNTRFFXVTEADVAKXSXRLPQVQAIXLXFLSAQTIXXGHSVEXD 100
Query: 251 LRALKLLHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSNGHSPLEDARAAMD 310
L ALKL+ S VVDT L+P GFP Q +GH E A A +
Sbjct: 101 LMALKLIXSTVVDTAVLFPQYMGFPYKRSLRXXAADXLAQIXQDSQDGHXSSEXANACLQ 160
Query: 311 LVLLKVQQ 318
+V+ KV+Q
Sbjct: 161 MVMWKVRQ 168
>BC068503-1|AAH68503.1| 774|Homo sapiens LOC81691 protein protein.
Length = 774
Score = 84.2 bits (199), Expect = 6e-16
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Query: 178 ELASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVG 237
EL I+++A G V LVKP + ++D+ T FSGI + L T L+DVQ + +
Sbjct: 243 ELTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKKILNPVTTKLKDVQRQLKALLP 302
Query: 238 TDTILIGHALENDLRALKLLHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSN 297
D +L+GH+L+ DLRALK++H V+DT LY +G +Q
Sbjct: 303 PDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVREQG--RRFKLKFLAKVILGKDIQCPDR 360
Query: 298 -GHSPLEDARAAMDL 311
GH EDAR ++L
Sbjct: 361 LGHDATEDARTILEL 375
>BC007646-1|AAH07646.1| 774|Homo sapiens exonuclease NEF-sp
protein.
Length = 774
Score = 84.2 bits (199), Expect = 6e-16
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Query: 178 ELASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVG 237
EL I+++A G V LVKP + ++D+ T FSGI + L T L+DVQ + +
Sbjct: 243 ELTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKKILNPVTTKLKDVQRQLKALLP 302
Query: 238 TDTILIGHALENDLRALKLLHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSN 297
D +L+GH+L+ DLRALK++H V+DT LY +G +Q
Sbjct: 303 PDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVREQG--RRFKLKFLAKVILGKDIQCPDR 360
Query: 298 -GHSPLEDARAAMDL 311
GH EDAR ++L
Sbjct: 361 LGHDATEDARTILEL 375
>AK057254-1|BAB71397.1| 443|Homo sapiens protein ( Homo sapiens
cDNA FLJ32692 fis, clone TESTI2000238. ).
Length = 443
Score = 84.2 bits (199), Expect = 6e-16
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Query: 178 ELASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVG 237
EL I+++A G V LVKP + ++D+ T FSGI + L T L+DVQ + +
Sbjct: 243 ELTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKKILNPVTTKLKDVQRQLKALLP 302
Query: 238 TDTILIGHALENDLRALKLLHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSN 297
D +L+GH+L+ DLRALK++H V+DT LY +G +Q
Sbjct: 303 PDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVREQG--RRFKLKFLAKVILGKDIQCPDR 360
Query: 298 -GHSPLEDARAAMDL 311
GH EDAR ++L
Sbjct: 361 LGHDATEDARTILEL 375
>AF332193-1|AAK17192.1| 774|Homo sapiens exonuclease NEF-sp
protein.
Length = 774
Score = 84.2 bits (199), Expect = 6e-16
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Query: 178 ELASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVG 237
EL I+++A G V LVKP + ++D+ T FSGI + L T L+DVQ + +
Sbjct: 243 ELTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKKILNPVTTKLKDVQRQLKALLP 302
Query: 238 TDTILIGHALENDLRALKLLHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSN 297
D +L+GH+L+ DLRALK++H V+DT LY +G +Q
Sbjct: 303 PDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVREQG--RRFKLKFLAKVILGKDIQCPDR 360
Query: 298 -GHSPLEDARAAMDL 311
GH EDAR ++L
Sbjct: 361 LGHDATEDARTILEL 375
>AC004381-4|AAC31668.1| 547|Homo sapiens Unknown gene product
protein.
Length = 547
Score = 84.2 bits (199), Expect = 6e-16
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Query: 178 ELASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVG 237
EL I+++A G V LVKP + ++D+ T FSGI + L T L+DVQ + +
Sbjct: 154 ELTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKKILNPVTTKLKDVQRQLKALLP 213
Query: 238 TDTILIGHALENDLRALKLLHSAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSN 297
D +L+GH+L+ DLRALK++H V+DT LY +G +Q
Sbjct: 214 PDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVREQG--RRFKLKFLAKVILGKDIQCPDR 271
Query: 298 -GHSPLEDARAAMDL 311
GH EDAR ++L
Sbjct: 272 LGHDATEDARTILEL 286
>BC020988-1|AAH20988.1| 325|Homo sapiens interferon stimulated
exonuclease gene 20kDa-like 1 protein.
Length = 325
Score = 69.7 bits (163), Expect = 1e-11
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 178 ELASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVG 237
ELA ++++ G ++Y ++P P+ D+ TR+SGI + + +A + Q +IL +
Sbjct: 128 ELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQHMRKAV-PFQVAQKEILKLL- 185
Query: 238 TDTILIGHALENDLRALKLLH--SAVVDTCALYPHARGFP-----MXXXXXXXXXXXXXX 290
+++GHAL ND +ALK +H S DT P+ P
Sbjct: 186 KGKVVVGHALHNDFQALKYVHPRSQTRDT-TYVPNFLSEPGLHTRARVSLKDLALQLLHK 244
Query: 291 TVQRGSNGHSPLEDARAAMDLV-LLKVQQEQ 320
+Q G +GHS +EDA AM+L L++VQ EQ
Sbjct: 245 KIQVGQHGHSSVEDATTAMELYRLVEVQWEQ 275
>BC014407-1|AAH14407.1| 209|Homo sapiens ISG20L1 protein protein.
Length = 209
Score = 69.7 bits (163), Expect = 1e-11
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 178 ELASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVG 237
ELA ++++ G ++Y ++P P+ D+ TR+SGI + + +A + Q +IL +
Sbjct: 12 ELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQHMRKAV-PFQVAQKEILKLL- 69
Query: 238 TDTILIGHALENDLRALKLLH--SAVVDTCALYPHARGFP-----MXXXXXXXXXXXXXX 290
+++GHAL ND +ALK +H S DT P+ P
Sbjct: 70 KGKVVVGHALHNDFQALKYVHPRSQTRDT-TYVPNFLSEPGLHTRARVSLKDLALQLLHK 128
Query: 291 TVQRGSNGHSPLEDARAAMDLV-LLKVQQEQ 320
+Q G +GHS +EDA AM+L L++VQ EQ
Sbjct: 129 KIQVGQHGHSSVEDATTAMELYRLVEVQWEQ 159
>BC005164-1|AAH05164.1| 327|Homo sapiens ISG20L1 protein protein.
Length = 327
Score = 69.7 bits (163), Expect = 1e-11
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 178 ELASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVG 237
ELA ++++ G ++Y ++P P+ D+ TR+SGI + + +A + Q +IL +
Sbjct: 128 ELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQHMRKAV-PFQVAQKEILKLL- 185
Query: 238 TDTILIGHALENDLRALKLLH--SAVVDTCALYPHARGFP-----MXXXXXXXXXXXXXX 290
+++GHAL ND +ALK +H S DT P+ P
Sbjct: 186 KGKVVVGHALHNDFQALKYVHPRSQTRDT-TYVPNFLSEPGLHTRARVSLKDLALQLLHK 244
Query: 291 TVQRGSNGHSPLEDARAAMDLV-LLKVQQEQ 320
+Q G +GHS +EDA AM+L L++VQ EQ
Sbjct: 245 KIQVGQHGHSSVEDATTAMELYRLVEVQWEQ 275
>AK022546-1|BAB14091.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12484 fis, clone NT2RM1001102, weakly similar to
Human HEM45 mRNA. ).
Length = 209
Score = 69.7 bits (163), Expect = 1e-11
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 178 ELASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVG 237
ELA ++++ G ++Y ++P P+ D+ TR+SGI + + +A + Q +IL +
Sbjct: 12 ELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQHMRKAV-PFQVAQKEILKLL- 69
Query: 238 TDTILIGHALENDLRALKLLH--SAVVDTCALYPHARGFP-----MXXXXXXXXXXXXXX 290
+++GHAL ND +ALK +H S DT P+ P
Sbjct: 70 KGKVVVGHALHNDFQALKYVHPRSQTRDT-TYVPNFLSEPGLHTRARVSLKDLALQLLHK 128
Query: 291 TVQRGSNGHSPLEDARAAMDLV-LLKVQQEQ 320
+Q G +GHS +EDA AM+L L++VQ EQ
Sbjct: 129 KIQVGQHGHSSVEDATTAMELYRLVEVQWEQ 159
>AF327352-1|AAL56012.1| 325|Homo sapiens hypothetical protein
SBBI58 protein.
Length = 325
Score = 69.7 bits (163), Expect = 1e-11
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 178 ELASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVG 237
ELA ++++ G ++Y ++P P+ D+ TR+SGI + + +A + Q +IL +
Sbjct: 128 ELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQHMRKAV-PFQVAQKEILKLL- 185
Query: 238 TDTILIGHALENDLRALKLLH--SAVVDTCALYPHARGFP-----MXXXXXXXXXXXXXX 290
+++GHAL ND +ALK +H S DT P+ P
Sbjct: 186 KGKVVVGHALHNDFQALKYVHPRSQTRDT-TYVPNFLSEPGLHTRARVSLKDLALQLLHK 244
Query: 291 TVQRGSNGHSPLEDARAAMDLV-LLKVQQEQ 320
+Q G +GHS +EDA AM+L L++VQ EQ
Sbjct: 245 KIQVGQHGHSSVEDATTAMELYRLVEVQWEQ 275
>BC000575-1|AAH00575.1| 353|Homo sapiens ISG20L2 protein protein.
Length = 353
Score = 67.3 bits (157), Expect = 7e-11
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 179 LASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGT 238
LA +++ +G ++Y + P +VD+ TR+SGIR + + AT + + IL + T
Sbjct: 198 LARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNAT-PFKIARGQILKIL-T 255
Query: 239 DTILIGHALENDLRALKLLH--SAVVDTCALYPHAR--GFPMXXXXXXXXXXXXXXT--V 292
I++GHA+ ND +AL+ H S DT + P R P +
Sbjct: 256 GKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPPLNRKADCPENATMSLKHLTKKLLNRDI 315
Query: 293 QRGSNGHSPLEDARAAMDLV-LLKVQQEQ 320
Q G +GHS +EDA+A M+L L++V+ E+
Sbjct: 316 QVGKSGHSSVEDAQATMELYKLVEVEWEE 344
>AL590666-6|CAI16341.1| 353|Homo sapiens interferon stimulated
exonuclease gene 20kDa-liker), member 1 (antiporter,
Na+/ protein.
Length = 353
Score = 67.3 bits (157), Expect = 7e-11
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 179 LASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGT 238
LA +++ +G ++Y + P +VD+ TR+SGIR + + AT + + IL + T
Sbjct: 198 LARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNAT-PFKIARGQILKIL-T 255
Query: 239 DTILIGHALENDLRALKLLH--SAVVDTCALYPHAR--GFPMXXXXXXXXXXXXXXT--V 292
I++GHA+ ND +AL+ H S DT + P R P +
Sbjct: 256 GKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPPLNRKADCPENATMSLKHLTKKLLNRDI 315
Query: 293 QRGSNGHSPLEDARAAMDLV-LLKVQQEQ 320
Q G +GHS +EDA+A M+L L++V+ E+
Sbjct: 316 QVGKSGHSSVEDAQATMELYKLVEVEWEE 344
>AK022733-1|BAB14212.1| 353|Homo sapiens protein ( Homo sapiens
cDNA FLJ12671 fis, clone NT2RM4002323, weakly similar to
ANTIGEN GOR. ).
Length = 353
Score = 67.3 bits (157), Expect = 7e-11
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 179 LASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGT 238
LA +++ +G ++Y + P +VD+ TR+SGIR + + AT + + IL + T
Sbjct: 198 LARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNAT-PFKIARGQILKIL-T 255
Query: 239 DTILIGHALENDLRALKLLH--SAVVDTCALYPHAR--GFPMXXXXXXXXXXXXXXT--V 292
I++GHA+ ND +AL+ H S DT + P R P +
Sbjct: 256 GKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPPLNRKADCPENATMSLKHLTKKLLNRDI 315
Query: 293 QRGSNGHSPLEDARAAMDLV-LLKVQQEQ 320
Q G +GHS +EDA+A M+L L++V+ E+
Sbjct: 316 QVGKSGHSSVEDAQATMELYKLVEVEWEE 344
>BC009274-1|AAH09274.1| 422|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 422
Score = 62.9 bits (146), Expect = 2e-09
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 180 ASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTD 239
A ++++ G+ VY VKP+ PV D+ T SGIRP +L + + L VQ ++ +
Sbjct: 263 ARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQG-EELEVVQKEVAEML-KG 320
Query: 240 TILIGHALENDLRALKLLH--SAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSN 297
IL+GHAL NDL+ L L H + DT Y + +Q
Sbjct: 321 RILVGHALHNDLKVLFLDHPKKKIRDT-QKYKPFKSQVKSGRPSLRLLSEKILGLQVQQA 379
Query: 298 GHSPLEDARAAMDL-VLLKVQQEQANR 323
H ++DA+AAM L V++K + E R
Sbjct: 380 EHCSIQDAQAAMRLYVMVKKEWESMAR 406
>AL158826-21|CAI12849.1| 422|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 422
Score = 62.9 bits (146), Expect = 2e-09
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 180 ASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTD 239
A ++++ G+ VY VKP+ PV D+ T SGIRP +L + + L VQ ++ +
Sbjct: 263 ARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQG-EELEVVQKEVAEML-KG 320
Query: 240 TILIGHALENDLRALKLLH--SAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSN 297
IL+GHAL NDL+ L L H + DT Y + +Q
Sbjct: 321 RILVGHALHNDLKVLFLDHPKKKIRDT-QKYKPFKSQVKSGRPSLRLLSEKILGLQVQQA 379
Query: 298 GHSPLEDARAAMDL-VLLKVQQEQANR 323
H ++DA+AAM L V++K + E R
Sbjct: 380 EHCSIQDAQAAMRLYVMVKKEWESMAR 406
>AK025493-1|BAB15152.1| 422|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21840 fis, clone HEP01804. ).
Length = 422
Score = 62.9 bits (146), Expect = 2e-09
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 180 ASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTD 239
A ++++ G+ VY VKP+ PV D+ T SGIRP +L + + L VQ ++ +
Sbjct: 263 ARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQG-EELEVVQKEVAEML-KG 320
Query: 240 TILIGHALENDLRALKLLH--SAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSN 297
IL+GHAL NDL+ L L H + DT Y + +Q
Sbjct: 321 RILVGHALHNDLKVLFLDHPKKKIRDT-QKYKPFKSQVKSGRPSLRLLSEKILGLQVQQA 379
Query: 298 GHSPLEDARAAMDL-VLLKVQQEQANR 323
H ++DA+AAM L V++K + E R
Sbjct: 380 EHCSIQDAQAAMRLYVMVKKEWESMAR 406
>AF295774-1|AAG02123.1| 422|Homo sapiens XPMC2H protein.
Length = 422
Score = 62.9 bits (146), Expect = 2e-09
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 180 ASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTD 239
A ++++ G+ VY VKP+ PV D+ T SGIRP +L + + L VQ ++ +
Sbjct: 263 ARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQG-EELEVVQKEVAEML-KG 320
Query: 240 TILIGHALENDLRALKLLH--SAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSN 297
IL+GHAL NDL+ L L H + DT Y + +Q
Sbjct: 321 RILVGHALHNDLKVLFLDHPKKKIRDT-QKYKPFKSQVKSGRPSLRLLSEKILGLQVQQA 379
Query: 298 GHSPLEDARAAMDL-VLLKVQQEQANR 323
H ++DA+AAM L V++K + E R
Sbjct: 380 EHCSIQDAQAAMRLYVMVKKEWESMAR 406
>AF273304-1|AAF98162.1| 422|Homo sapiens XPMC2 protein protein.
Length = 422
Score = 62.9 bits (146), Expect = 2e-09
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 180 ASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTD 239
A ++++ G+ VY VKP+ PV D+ T SGIRP +L + + L VQ ++ +
Sbjct: 263 ARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQG-EELEVVQKEVAEML-KG 320
Query: 240 TILIGHALENDLRALKLLH--SAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSN 297
IL+GHAL NDL+ L L H + DT Y + +Q
Sbjct: 321 RILVGHALHNDLKVLFLDHPKKKIRDT-QKYKPFKSQVKSGRPSLRLLSEKILGLQVQQA 379
Query: 298 GHSPLEDARAAMDL-VLLKVQQEQANR 323
H ++DA+AAM L V++K + E R
Sbjct: 380 EHCSIQDAQAAMRLYVMVKKEWESMAR 406
>AL158826-19|CAI12848.1| 374|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 374
Score = 57.2 bits (132), Expect = 8e-08
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 180 ASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGTD 239
A ++++ G+ VY VKP+ PV D+ T SGIRP +L + + L VQ ++ +
Sbjct: 248 ARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQG-EELEVVQKEVAEML-KG 305
Query: 240 TILIGHALENDLRA 253
IL+GHAL NDL++
Sbjct: 306 RILVGHALHNDLKS 319
>X89773-1|CAA61915.2| 181|Homo sapiens isg20 protein.
Length = 181
Score = 52.0 bits (119), Expect = 3e-06
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 179 LASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGT 238
LA +++ G ++Y ++P + D+ TR SG+ P+ + AT + +IL +
Sbjct: 25 LARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGAT-PFAVARLEILQLL-K 82
Query: 239 DTILIGHALENDLRALK--LLHSAVVDTCA---LYPHAR-GFPMXXXXXXXXXXXXXXTV 292
+++GH L++D +ALK + + DT L+ A+ ++
Sbjct: 83 GKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHCRRVSLRVLSERLLHKSI 142
Query: 293 QRGSNGHSPLEDARAAMDLVLLKVQQEQANR 323
Q GHS +EDARA M+L + Q+ +A R
Sbjct: 143 QNSLLGHSSVEDARATMELYQIS-QRIRARR 172
>U88964-1|AAB53416.1| 181|Homo sapiens HEM45 protein.
Length = 181
Score = 52.0 bits (119), Expect = 3e-06
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 179 LASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGT 238
LA +++ G ++Y ++P + D+ TR SG+ P+ + AT + +IL +
Sbjct: 25 LARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGAT-PFAVARLEILQLL-K 82
Query: 239 DTILIGHALENDLRALK--LLHSAVVDTCA---LYPHAR-GFPMXXXXXXXXXXXXXXTV 292
+++GH L++D +ALK + + DT L+ A+ ++
Sbjct: 83 GKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHCRRVSLRVLSERLLHKSI 142
Query: 293 QRGSNGHSPLEDARAAMDLVLLKVQQEQANR 323
Q GHS +EDARA M+L + Q+ +A R
Sbjct: 143 QNSLLGHSSVEDARATMELYQIS-QRIRARR 172
>CR456942-1|CAG33223.1| 181|Homo sapiens ISG20 protein.
Length = 181
Score = 52.0 bits (119), Expect = 3e-06
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 179 LASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGT 238
LA +++ G ++Y ++P + D+ TR SG+ P+ + AT + +IL +
Sbjct: 25 LARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGAT-PFAVARLEILQLL-K 82
Query: 239 DTILIGHALENDLRALK--LLHSAVVDTCA---LYPHAR-GFPMXXXXXXXXXXXXXXTV 292
+++GH L++D +ALK + + DT L+ A+ ++
Sbjct: 83 GKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHCRRVSLRVLSERLLHKSI 142
Query: 293 QRGSNGHSPLEDARAAMDLVLLKVQQEQANR 323
Q GHS +EDARA M+L + Q+ +A R
Sbjct: 143 QNSLLGHSSVEDARATMELYQIS-QRIRARR 172
>BT006952-1|AAP35598.1| 181|Homo sapiens interferon stimulated gene
20kDa protein.
Length = 181
Score = 52.0 bits (119), Expect = 3e-06
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 179 LASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGT 238
LA +++ G ++Y ++P + D+ TR SG+ P+ + AT + +IL +
Sbjct: 25 LARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGAT-PFAVARLEILQLL-K 82
Query: 239 DTILIGHALENDLRALK--LLHSAVVDTCA---LYPHAR-GFPMXXXXXXXXXXXXXXTV 292
+++GH L++D +ALK + + DT L+ A+ ++
Sbjct: 83 GKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHCRRVSLRVLSERLLHKSI 142
Query: 293 QRGSNGHSPLEDARAAMDLVLLKVQQEQANR 323
Q GHS +EDARA M+L + Q+ +A R
Sbjct: 143 QNSLLGHSSVEDARATMELYQIS-QRIRARR 172
>BC007922-1|AAH07922.1| 181|Homo sapiens interferon stimulated
exonuclease gene 20kDa protein.
Length = 181
Score = 52.0 bits (119), Expect = 3e-06
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 179 LASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARATKTLRDVQNDILGFVGT 238
LA +++ G ++Y ++P + D+ TR SG+ P+ + AT + +IL +
Sbjct: 25 LARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGAT-PFAVARLEILQLL-K 82
Query: 239 DTILIGHALENDLRALK--LLHSAVVDTCA---LYPHAR-GFPMXXXXXXXXXXXXXXTV 292
+++GH L++D +ALK + + DT L+ A+ ++
Sbjct: 83 GKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHCRRVSLRVLSERLLHKSI 142
Query: 293 QRGSNGHSPLEDARAAMDLVLLKVQQEQANR 323
Q GHS +EDARA M+L + Q+ +A R
Sbjct: 143 QNSLLGHSSVEDARATMELYQIS-QRIRARR 172
>AB209323-1|BAD92560.1| 188|Homo sapiens hypothetical protein
FLJ12484 variant protein.
Length = 188
Score = 41.5 bits (93), Expect = 0.004
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 241 ILIGHALENDLRALKLLH--SAVVDTCALYPHARGFPMXXXXXXXXXXXXXXT-----VQ 293
+++GHAL ND +ALK +H S DT + P+ P +Q
Sbjct: 52 VVVGHALHNDFQALKYVHPRSQTRDTTYV-PNFLSEPGLHTRARVSLKDLALQLLHKKIQ 110
Query: 294 RGSNGHSPLEDARAAMDLV-LLKVQQEQ 320
G +GHS +EDA AM+L L++VQ EQ
Sbjct: 111 VGQHGHSSVEDATTAMELYRLVEVQWEQ 138
>BC024043-1|AAH24043.1| 1198|Homo sapiens ubiquitin specific peptidase
52 protein.
Length = 1198
Score = 39.9 bits (89), Expect = 0.013
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Query: 197 VKPSSPVVDHNTRFSGIRPRDL-----ARATKTLRDVQNDILGFVGTDTILIGHALENDL 251
+ VVD+ T++SGI+P DL ++ TL+ + + +GH L+ D
Sbjct: 1025 ISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDF 1084
Query: 252 RALKLL--HSAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSNGHSPLEDARAAM 309
R + L+ V+DT L+ H P ++ H +EDAR A+
Sbjct: 1085 RVINLMVPKDQVLDTVYLF-H---MPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL 1140
Query: 310 DL 311
L
Sbjct: 1141 QL 1142
>AB107585-1|BAD02263.1| 1198|Homo sapiens PABP1-DEPENDENT
POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN2 protein.
Length = 1198
Score = 39.9 bits (89), Expect = 0.013
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Query: 197 VKPSSPVVDHNTRFSGIRPRDL-----ARATKTLRDVQNDILGFVGTDTILIGHALENDL 251
+ VVD+ T++SGI+P DL ++ TL+ + + +GH L+ D
Sbjct: 1025 ISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDF 1084
Query: 252 RALKLL--HSAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSNGHSPLEDARAAM 309
R + L+ V+DT L+ H P ++ H +EDAR A+
Sbjct: 1085 RVINLMVPKDQVLDTVYLF-H---MPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL 1140
Query: 310 DL 311
L
Sbjct: 1141 QL 1142
>AB014610-1|BAA31685.2| 1206|Homo sapiens KIAA0710 protein protein.
Length = 1206
Score = 39.9 bits (89), Expect = 0.013
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Query: 197 VKPSSPVVDHNTRFSGIRPRDL-----ARATKTLRDVQNDILGFVGTDTILIGHALENDL 251
+ VVD+ T++SGI+P DL ++ TL+ + + +GH L+ D
Sbjct: 1033 ISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDF 1092
Query: 252 RALKLL--HSAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSNGHSPLEDARAAM 309
R + L+ V+DT L+ H P ++ H +EDAR A+
Sbjct: 1093 RVINLMVPKDQVLDTVYLF-H---MPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL 1148
Query: 310 DL 311
L
Sbjct: 1149 QL 1150
>BC094885-1|AAH94885.1| 1202|Homo sapiens USP52 protein protein.
Length = 1202
Score = 39.5 bits (88), Expect = 0.017
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Query: 197 VKPSSPVVDHNTRFSGIRPRDL-----ARATKTLRDVQNDILGFVGTDTILIGHALENDL 251
+ VVD+ T++SGI+P DL ++ TL+ + + +GH L+ D
Sbjct: 1029 ISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDF 1088
Query: 252 RALKLL--HSAVVDTCALYPHARGFPMXXXXXXXXXXXXXXTVQRGSNGHSPLEDARAAM 309
R + L+ V+DT L+ H P ++ H +EDAR A+
Sbjct: 1089 RVVNLMVPKDQVLDTVYLF-H---MPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL 1144
Query: 310 DL 311
L
Sbjct: 1145 QL 1146
>BC016341-1|AAH16341.1| 87|Homo sapiens ISG20 protein protein.
Length = 87
Score = 35.9 bits (79), Expect = 0.21
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 179 LASIAVIAADGRLVYRSLVKPSSPVVDHNTRFSGIRPRDLARAT 222
LA +++ G ++Y ++P + D+ TR SG+ P+ + AT
Sbjct: 25 LARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGAT 68
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.134 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,643,996
Number of Sequences: 224733
Number of extensions: 1679309
Number of successful extensions: 2997
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2917
Number of HSP's gapped (non-prelim): 55
length of query: 344
length of database: 73,234,838
effective HSP length: 91
effective length of query: 253
effective length of database: 52,784,135
effective search space: 13354386155
effective search space used: 13354386155
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 66 (30.7 bits)
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