Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005352-TA|BGIBMGA005352-PA|IPR011046|WD40-like,
IPR004827|Basic-leucine zipper (bZIP) transcription factor
(122 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 34 0.006
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 31 0.039
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 29 0.16
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 29 0.21
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 28 0.36
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 27 0.84
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 26 1.9
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 25 2.5
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 25 3.4
SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex sub... 25 4.5
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 24 5.9
SPCC1235.12c |mug146||meiotically upregulated gene Mug46|Schizos... 24 5.9
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 24 5.9
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 24 5.9
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 24 5.9
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 24 7.8
SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces p... 24 7.8
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 24 7.8
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 34.3 bits (75), Expect = 0.006
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 88 LMKNLKGHPGTVLLMDFSANGKFMAATCDDSIVFV 122
L K L GH G V +D+SA+G+F+ + DD+ + V
Sbjct: 37 LQKELTGHTGCVNTLDWSADGEFLLSGSDDTRLIV 71
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 31.5 bits (68), Expect = 0.039
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 95 HPGTVLLMDFSANGKFMAATCDDSIVFV 122
H GTV + FS NG+++A+ DD +V +
Sbjct: 73 HTGTVTSVRFSPNGQYLASGSDDRVVII 100
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 29.5 bits (63), Expect = 0.16
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 82 DFSHPWLMK-NLKGHPGTVLLMDFSANGKFMAATCDDSIVFV 122
D W + L+GH TV + FS NG +A+ +D VF+
Sbjct: 452 DDGDDWALTCQLQGHTNTVWALAFSPNGNTLASADNDGNVFL 493
Score = 24.6 bits (51), Expect = 4.5
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 92 LKGHPGTVLLMDFSANGKFMAATCDDSIVFV 122
L+GH V + +S NG ++A D V++
Sbjct: 374 LEGHENEVKCIAWSCNGNYLATCSRDKSVWI 404
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 29.1 bits (62), Expect = 0.21
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 68 GGKSKKRPAWKGKTDFSHPWLMKNLKGHPGTVLLMDFSANGKFMAATCDDSIVFV 122
G K + W D + +++ L GH G+VL +DF + + DS + +
Sbjct: 237 GSKDRTVSVW----DVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIII 287
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 28.3 bits (60), Expect = 0.36
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 95 HPGTVLLMDFSANGKFMAATCDDS 118
HP V + FS NGK++A C+ +
Sbjct: 312 HPSVVCCVKFSNNGKYLATGCNQA 335
Score = 24.2 bits (50), Expect = 5.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 94 GHPGTVLLMDFSANGKFMAATCDD 117
GH + +DFS NG+F+ + D
Sbjct: 400 GHEQDIYSLDFSHNGRFIVSGSGD 423
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 27.1 bits (57), Expect = 0.84
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 80 KTDFSHPWL-MKNLKGHPGTVLLMDFSANGKFMAATCDDSIV 120
K D P L L H G VL +++S NG F+A+ D +
Sbjct: 204 KWDIRFPKLPFLKLAAHNGVVLCVNYSPNGVFLASCGRDKTI 245
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 25.8 bits (54), Expect = 1.9
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 87 WLMKNLKGH-PGTVLLMDFSANGKFMAATCDDSIVFV 122
W+ K+LK T+L +D+ N +AA C D +V
Sbjct: 136 WVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYV 172
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 25.4 bits (53), Expect = 2.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 95 HPGTVLLMDFSANGKFMAATCD 116
H + + FSA+GKF+A C+
Sbjct: 286 HTSVICYVRFSADGKFLATGCN 307
Score = 24.2 bits (50), Expect = 5.9
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 88 LMKNLKGHPGTVLLMDFSANGKFMAATCDDSIV 120
L++ L GH +V + FS +GK++ + D+ +
Sbjct: 450 LVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTI 482
Score = 23.8 bits (49), Expect = 7.8
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 82 DFSHPWLMKNLKGHPGTVLLMDFSANGKFMAATCDDSIV 120
D + + + L GH + +DFS +GK + + D V
Sbjct: 362 DIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTV 400
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 25.0 bits (52), Expect = 3.4
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 89 MKNLKGHPGTVLLMDFSANGKFMAATCDDSIVFV 122
+ +GH V + F +GK++A + +D V V
Sbjct: 76 LMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKV 109
>SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex
subunit 8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 214
Score = 24.6 bits (51), Expect = 4.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 37 KNQAVEERERENNSGTLTDEPPCEAVAETRVGGKSKK 73
K + + E+E +EPP E E + GG+ ++
Sbjct: 102 KTEPPQPEEKEGKEAKEPEEPPKEEAEEPQEGGEEEE 138
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 24.2 bits (50), Expect = 5.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 88 LMKNLKGHPGTVLLMDFSANGKFMAATCDDSIVFV 122
L+ L GH V MDF G +A+ D+ + V
Sbjct: 96 LLITLNGHKSAVTTMDFDKMGTRLASGSMDTDIIV 130
>SPCC1235.12c |mug146||meiotically upregulated gene
Mug46|Schizosaccharomyces pombe|chr 3|||Manual
Length = 311
Score = 24.2 bits (50), Expect = 5.9
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 25 LLHFIYKIIFRNKNQAVEERERENNSGTLTDEPPCE 60
LLH+I+ F N++ +V ++ +NS TL CE
Sbjct: 75 LLHYIF---FSNRSSSVLGKQNVHNSQTLGSVSFCE 107
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 24.2 bits (50), Expect = 5.9
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 84 SHPWLMKNLKGHPGT 98
+HPW+++N +G P +
Sbjct: 391 NHPWMIRNYEGPPAS 405
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 24.2 bits (50), Expect = 5.9
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 92 LKGHPGTVLLMDFSANGKFMAATCDD 117
L GH G + FS++G+++ + +D
Sbjct: 190 LVGHEGACFDLKFSSDGRYLCSVSED 215
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 24.2 bits (50), Expect = 5.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 92 LKGHPGTVLLMDFSANGKFMAATCDDSIV 120
L+GH G V + + K ATC D V
Sbjct: 311 LRGHKGDVNAVKWMPGSKSKLATCGDDCV 339
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 23.8 bits (49), Expect = 7.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 82 DFSHPWLMKNLKGHPGTVLLMDFSANGKFMAATCDDS 118
D P +++ H G + + F NGK T DDS
Sbjct: 382 DIRSPDIVQAYDHHLGGINSITFLENGKRFVTTSDDS 418
>SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 728
Score = 23.8 bits (49), Expect = 7.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 19 AVLVCVLLHFIYKIIFRNKNQAVEERE 45
+V +CVL + IY FRN+ ERE
Sbjct: 680 SVGICVLCYKIYFKFFRNRFMNQGERE 706
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 23.8 bits (49), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 92 LKGHPGTVLLMDFSANG 108
L PG++LL+D ANG
Sbjct: 913 LSARPGSILLLDEPANG 929
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.135 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,117
Number of Sequences: 5004
Number of extensions: 20964
Number of successful extensions: 82
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 60
Number of HSP's gapped (non-prelim): 24
length of query: 122
length of database: 2,362,478
effective HSP length: 65
effective length of query: 57
effective length of database: 2,037,218
effective search space: 116121426
effective search space used: 116121426
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)
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