GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005348-TA|BGIBMGA005348-PA|IPR009041|Proteinase
inhibitor, PMP and SGCI, IPR010895|CHRD, IPR001007|von Willebrand
factor, type C
         (802 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    32   0.021
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    23   9.8  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    23   9.8  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 31.9 bits (69), Expect = 0.021
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 281 ENPQRRISGSVRQKGTCELFHT---PLVAERTPAAPSPEGLALVYIDKEGSLVYDIQMEN 337
           +N +  I   V +  T + F T   P+V   + + P+ EG+      ++GS+     +++
Sbjct: 161 QNAEEDIVDPVEENETYDEFDTIRIPIVRSLSKSPPNDEGIETDSDRRKGSIARCWSLDS 220

Query: 338 VGVVDPKITLVEEQGKRH 355
               D  I+L   Q KRH
Sbjct: 221 TAASDEDISLTTHQQKRH 238


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 391 DAGPPILRGRLTSRLMPDAAGSG 413
           D GP    GR   +++PDA  +G
Sbjct: 49  DEGPCTNEGRELKKILPDALSTG 71


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 391 DAGPPILRGRLTSRLMPDAAGSG 413
           D GP    GR   +++PDA  +G
Sbjct: 49  DEGPCTNEGRELKKILPDALSTG 71


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.135    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,240
Number of Sequences: 429
Number of extensions: 10388
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 3
length of query: 802
length of database: 140,377
effective HSP length: 63
effective length of query: 739
effective length of database: 113,350
effective search space: 83765650
effective search space used: 83765650
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)