GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005346-TA|BGIBMGA005346-PA|IPR001128|Cytochrome P450
         (254 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...   172   3e-45
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   116   2e-28
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    71   1e-14
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.2  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score =  172 bits (418), Expect = 3e-45
 Identities = 89/245 (36%), Positives = 133/245 (54%), Gaps = 7/245 (2%)

Query: 9   RRSSESKKGDFLQILIDFAAKETAQNDTAKREILLDDDTIDAQSLLFLIAGYETSSTLLS 68
           R  +   + DF+ +L+     E  +N      I L D  I AQ+ +F +AG+ETSST +S
Sbjct: 260 RNDNNIVRPDFINMLM-----ELQKNPQKLENIKLTDSLIAAQAFVFFLAGFETSSTTMS 314

Query: 69  FAIHVLATKPDLQETLRAHVQEMT--KGKEMSYELLAQMDYLEAFLQETLRIYPPVARVD 126
            A++ LA   D+Q+ LR  +        KE+ Y+ + +M+YL+   +ETLR+YPP + + 
Sbjct: 315 NALYELALNQDVQKKLREEINTFCPKNNKELKYDDIKEMEYLDKVFKETLRMYPPASILM 374

Query: 127 RICTKPYIIPGTTVHVGVGDAVAIPVYGLHMDEDIYPEAREFKPERFMDDQKKDRPSHLY 186
           R     Y    T + +     + IP + +H D  IYP    F PERF  D    R    Y
Sbjct: 375 RKAISDYTFNDTKITIPKEMKIWIPAFAIHRDSAIYPNPDSFDPERFDQDAMASRHPMHY 434

Query: 187 LPFGAGPRNCIGLRFAMISAKIAMVALMKNFKFSVCSKTMDPIDFDKRAVLLKSAKGLWV 246
           LPFG GPRNCIG RFA+   K+ ++ +++N K  VC KT+ P +FD  A LL    G+++
Sbjct: 435 LPFGDGPRNCIGARFAVYQTKVGLITILRNHKVEVCEKTIIPYEFDPGAFLLSPKDGIYL 494

Query: 247 RIELI 251
           +I  I
Sbjct: 495 KITKI 499


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  116 bits (279), Expect = 2e-28
 Identities = 73/240 (30%), Positives = 124/240 (51%), Gaps = 16/240 (6%)

Query: 13  ESKKGDFLQILIDFAAKETAQNDTAKREILLDDDTIDAQSLLFLIAGYETSSTLLSFAIH 72
           E K+  FL +LI     E  QN      +LL D  +  Q    +  G++T+++  SF + 
Sbjct: 313 EKKRQAFLDLLI-----EAGQNG-----VLLTDKEVKEQVDTIMFEGHDTTASGSSFFLA 362

Query: 73  VLATKPDLQETLRAHVQEM--TKGKEMSYELLAQMDYLEAFLQETLRIYPPVARVDRICT 130
           V+   PD+QE +   + E+     +  +++   +M YLE  L ETLR+YPPV  + R   
Sbjct: 363 VMGCHPDIQEKVIQELDEIFGDSDRPATFQDTLEMKYLERCLLETLRMYPPVPLIAREIK 422

Query: 131 KPYIIPGTTVHVGVGDAVAIPVYGLHMDEDIYPEAREFKPERFMDDQKKDRPSHLYLPFG 190
               +      +  G  V I  + LH    IYP    F P+ F+ ++  +R  + ++PF 
Sbjct: 423 TDLKLASGDYTIPAGCTVVIGTFKLHRQPHIYPNPDVFDPDNFLPEKTANRHYYAFVPFS 482

Query: 191 AGPRNCIGLRFAMISAKIAMVALMKNFKFSVCSKTMDPIDFDKRA-VLLKSAKGLWVRIE 249
           AGPR+C+G ++AM+  KI +  +++NF+  V S   +  +F  +A ++LK A G  +R+E
Sbjct: 483 AGPRSCVGRKYAMLKLKIVLSTILRNFR--VRSDVKES-EFRLQADIILKRADGFKIRLE 539


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 70.5 bits (165), Expect = 1e-14
 Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 4/168 (2%)

Query: 55  FLIAGYETSSTLLSFAIHVLATKPDLQETLRAHVQEMTK-GKEMSYELLAQMDYLEAFLQ 113
           F+ AG  T    L F   ++   P +Q  L      +   G +++ + L +  YL A + 
Sbjct: 327 FIAAGIHTLGNTLVFLFDLIGRNPTVQNKLYEETYALAPAGCDLTIDNLRKAKYLRACIT 386

Query: 114 ETLRIYPPVARVDRICTKPYIIPGTTVHVGVGDAVAIPVYGLHMDEDIYPEAREFKPERF 173
           E+LR+ P    + RI  +P  + G    +  G  V +  +   ++E+ + +A+++ PER+
Sbjct: 387 ESLRLIPTTTCIARILDEPIELSG--YRLTAGTVVLLHTWIAGLNEENFKDAKKYLPERW 444

Query: 174 MDDQKKDRPSHLYLPFGAGPRNCIGLRFAMISAKIAMVALMKNFKFSV 221
                   P  L  PFGAG R C G RF  ++ ++ +  +++ F+  V
Sbjct: 445 TTPTTPHSPL-LVAPFGAGRRICPGKRFVDLALQLILAKIIREFEIIV 491


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 125 VDRICTKPYIIPGTTVHVGVGDAVAIPVYGLH 156
           VD+I     I+PG T+ V + D      Y L+
Sbjct: 2   VDQINRDEDILPGITIGVHILDTCGRDTYALN 33


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 125 VDRICTKPYIIPGTTVHVGVGDAVAIPVYGLH 156
           VD+I     I+PG T+ V + D      Y L+
Sbjct: 92  VDQINRDEDILPGITIGVHILDTCGRDTYALN 123


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.137    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,294
Number of Sequences: 429
Number of extensions: 2500
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 5
length of query: 254
length of database: 140,377
effective HSP length: 56
effective length of query: 198
effective length of database: 116,353
effective search space: 23037894
effective search space used: 23037894
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)