GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005343-TA|BGIBMGA005343-PA|IPR001932|Protein phosphatase
2C-like
         (304 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111551-1|AAI11552.1|  304|Homo sapiens PTC7 protein phosphatas...   260   4e-69
AY357944-1|AAQ57274.1|  303|Homo sapiens T-cell activation prote...   260   4e-69
AF385435-1|AAM43836.1|  304|Homo sapiens T-cell activation prote...   260   4e-69

>BC111551-1|AAI11552.1|  304|Homo sapiens PTC7 protein phosphatase
           homolog (S. cerevisiae) protein.
          Length = 304

 Score =  260 bits (637), Expect = 4e-69
 Identities = 136/304 (44%), Positives = 186/304 (61%), Gaps = 5/304 (1%)

Query: 1   MQSIFWTGRLLSRALRNGLASISSAAELNVFNKKHPYLVSVVCGFPKDIANGRTRKGQ-F 59
           M S+   GRL++RA+  GL+     A           LV+  CGF KD   G  +KG  +
Sbjct: 1   MFSVLSYGRLVARAVLGGLSQTDPRAGGGGGGDYG--LVTAGCGFGKDFRKGLLKKGACY 58

Query: 60  GDDAWFATNFQNXXXXXXXXXXXXWRAYGIDPGEFSSYLMRTCERLVQMGHFKLSEPGDL 119
           GDDA F    ++            WR YG+DP +FS  LMRTCERLV+ G F  S P  +
Sbjct: 59  GDDACFVARHRSADVLGVADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNPIGI 118

Query: 120 LAKSYYELLEHKKPILGSSTACVMILDRNESLMRAANIGDSXXXXXXXXXXXXXSHEQQH 179
           L  SY ELL++K P+LGSSTAC+++LDR    +  AN+GDS             S EQQH
Sbjct: 119 LTTSYCELLQNKVPLLGSSTACIVVLDRTSHRLHTANLGDSGFLVVRGGEVVHRSDEQQH 178

Query: 180 YFNTPYQLSLPPPGHDRNVLSDRPESADTAEFPVECDDVILVATDGVFDNVPEPVLVAEM 239
           YFNTP+QLS+ PP  +  VLSD P++AD+  F V+  D+IL ATDG+FDN+P+ +++ E+
Sbjct: 179 YFNTPFQLSIAPPEAEGVVLSDSPDAADSTSFDVQLGDIILTATDGLFDNMPDYMILQEL 238

Query: 240 RRAQGLAADPQKLQSVANSIAWMARNLSFDGCYMSPFAKSARQNGIDAIGGKPDDITVLL 299
           ++ +   ++ + +Q  A SIA  A  L++D  YMSPFA+ A  NG++  GGKPDDITVLL
Sbjct: 239 KKLKN--SNYESIQQTARSIAEQAHELAYDPNYMSPFAQFACDNGLNVRGGKPDDITVLL 296

Query: 300 AIVA 303
           +IVA
Sbjct: 297 SIVA 300


>AY357944-1|AAQ57274.1|  303|Homo sapiens T-cell activation protein
           phosphatase 2C-like protein protein.
          Length = 303

 Score =  260 bits (637), Expect = 4e-69
 Identities = 136/304 (44%), Positives = 187/304 (61%), Gaps = 6/304 (1%)

Query: 1   MQSIFWTGRLLSRALRNGLASISSAAELNVFNKKHPYLVSVVCGFPKDIANGRTRKGQ-F 59
           M S+   GRL++RA+  GL+     A     +     LV+  CGF KD   G  +KG  +
Sbjct: 1   MFSVLSYGRLVARAVLGGLSQTDPRAGGGGGDYG---LVTAGCGFGKDFRKGLLKKGACY 57

Query: 60  GDDAWFATNFQNXXXXXXXXXXXXWRAYGIDPGEFSSYLMRTCERLVQMGHFKLSEPGDL 119
           GDDA F    ++            WR YG+DP +FS  LMRTCERLV+ G F  S P  +
Sbjct: 58  GDDACFVARHRSADVLGVADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNPIGI 117

Query: 120 LAKSYYELLEHKKPILGSSTACVMILDRNESLMRAANIGDSXXXXXXXXXXXXXSHEQQH 179
           L  SY ELL++K P+LGSSTAC+++LDR    +  AN+GDS             S EQQH
Sbjct: 118 LTTSYRELLQNKVPLLGSSTACIVVLDRTSHRLHTANLGDSGFLVVRGGEVVHRSDEQQH 177

Query: 180 YFNTPYQLSLPPPGHDRNVLSDRPESADTAEFPVECDDVILVATDGVFDNVPEPVLVAEM 239
           YFNTP+QLS+ PP  +  VLSD P++AD+  F V+  D+IL ATDG+FDN+P+ +++ E+
Sbjct: 178 YFNTPFQLSIAPPEAEGVVLSDSPDAADSTSFDVQLGDIILTATDGLFDNMPDYMILQEL 237

Query: 240 RRAQGLAADPQKLQSVANSIAWMARNLSFDGCYMSPFAKSARQNGIDAIGGKPDDITVLL 299
           ++ +   ++ + +Q  A SIA  A  L++D  YMSPFA+ A  NG++  GGKPDDITVLL
Sbjct: 238 KKLKN--SNYESIQQTARSIAEQAHELAYDPNYMSPFAQFACDNGLNVRGGKPDDITVLL 295

Query: 300 AIVA 303
           +IVA
Sbjct: 296 SIVA 299


>AF385435-1|AAM43836.1|  304|Homo sapiens T-cell activation protein
           phosphatase 2C protein.
          Length = 304

 Score =  260 bits (637), Expect = 4e-69
 Identities = 136/304 (44%), Positives = 186/304 (61%), Gaps = 5/304 (1%)

Query: 1   MQSIFWTGRLLSRALRNGLASISSAAELNVFNKKHPYLVSVVCGFPKDIANGRTRKGQ-F 59
           M S+   GRL++RA+  GL+     A           LV+  CGF KD   G  +KG  +
Sbjct: 1   MFSVLSYGRLVARAVLGGLSQTDPRAGGGGGGDYG--LVTAGCGFGKDFRKGLLKKGACY 58

Query: 60  GDDAWFATNFQNXXXXXXXXXXXXWRAYGIDPGEFSSYLMRTCERLVQMGHFKLSEPGDL 119
           GDDA F    ++            WR YG+DP +FS  LMRTCERLV+ G F  S P  +
Sbjct: 59  GDDACFVARHRSADVLGVADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNPIGI 118

Query: 120 LAKSYYELLEHKKPILGSSTACVMILDRNESLMRAANIGDSXXXXXXXXXXXXXSHEQQH 179
           L  SY ELL++K P+LGSSTAC+++LDR    +  AN+GDS             S EQQH
Sbjct: 119 LTTSYCELLQNKVPLLGSSTACIVVLDRTSHRLHTANLGDSGFLVVRGGEVVHRSDEQQH 178

Query: 180 YFNTPYQLSLPPPGHDRNVLSDRPESADTAEFPVECDDVILVATDGVFDNVPEPVLVAEM 239
           YFNTP+QLS+ PP  +  VLSD P++AD+  F V+  D+IL ATDG+FDN+P+ +++ E+
Sbjct: 179 YFNTPFQLSIAPPEAEGVVLSDSPDAADSTSFDVQLGDIILTATDGLFDNMPDYMILQEL 238

Query: 240 RRAQGLAADPQKLQSVANSIAWMARNLSFDGCYMSPFAKSARQNGIDAIGGKPDDITVLL 299
           ++ +   ++ + +Q  A SIA  A  L++D  YMSPFA+ A  NG++  GGKPDDITVLL
Sbjct: 239 KKLKN--SNYESIQQTARSIAEQAHELAYDPNYMSPFAQFACDNGLNVRGGKPDDITVLL 296

Query: 300 AIVA 303
           +IVA
Sbjct: 297 SIVA 300


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.320    0.135    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,066,382
Number of Sequences: 224733
Number of extensions: 1540325
Number of successful extensions: 2972
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2960
Number of HSP's gapped (non-prelim): 3
length of query: 304
length of database: 73,234,838
effective HSP length: 90
effective length of query: 214
effective length of database: 53,008,868
effective search space: 11343897752
effective search space used: 11343897752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)