Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005341-TA|BGIBMGA005341-PA|undefined
(184 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL158069-1|CAD18889.1| 472|Homo sapiens transmembrane protein 2... 30 4.1
AJ549246-1|CAD70489.1| 105|Homo sapiens putative DYT3 protein p... 30 4.1
AF087142-1|AAC62086.1| 473|Homo sapiens TED protein protein. 30 4.1
AY129465-1|AAM93492.1| 4074|Homo sapiens polycystic kidney and h... 29 9.4
AY074797-1|AAL74290.1| 4074|Homo sapiens polycystic kidney and h... 29 9.4
AL590391-1|CAH72781.1| 4074|Homo sapiens polycystic kidney and h... 29 9.4
AL391221-1|CAI16676.1| 4074|Homo sapiens polycystic kidney and h... 29 9.4
AL355997-1|CAI20233.1| 4074|Homo sapiens polycystic kidney and h... 29 9.4
AL157774-1|CAH73867.1| 4074|Homo sapiens polycystic kidney and h... 29 9.4
AL121946-1|CAI20324.1| 4074|Homo sapiens polycystic kidney and h... 29 9.4
AF480064-1|AAM44232.1| 4074|Homo sapiens polycystic kidney and h... 29 9.4
>AL158069-1|CAD18889.1| 472|Homo sapiens transmembrane protein 28
protein.
Length = 472
Score = 30.3 bits (65), Expect = 4.1
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 49 AGALLICAAMCCWLQSPARQP--QNERA 74
A AL IC CCW P+ +P +ERA
Sbjct: 13 AAALTICCCCCCWAPRPSDKPCADSERA 40
>AJ549246-1|CAD70489.1| 105|Homo sapiens putative DYT3 protein
protein.
Length = 105
Score = 30.3 bits (65), Expect = 4.1
Identities = 18/56 (32%), Positives = 22/56 (39%)
Query: 15 YGMVLLCAGALINWLGLAEDYAEPVRYVGVACIVAGALLICAAMCCWLQSPARQPQ 70
+G +LL G LG A V G V L +CCW PAR P+
Sbjct: 2 HGALLLLRGLGFLLLGRARGDVVVVAVAGRVLTVLVVALPPRTLCCWTSPPARPPR 57
>AF087142-1|AAC62086.1| 473|Homo sapiens TED protein protein.
Length = 473
Score = 30.3 bits (65), Expect = 4.1
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 49 AGALLICAAMCCWLQSPARQP--QNERA 74
A AL IC CCW P+ +P +ERA
Sbjct: 13 AAALTICCCCCCWAPRPSDKPCADSERA 40
>AY129465-1|AAM93492.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 protein.
Length = 4074
Score = 29.1 bits (62), Expect = 9.4
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 48 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 105
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 106 VAG 108
V G
Sbjct: 3925 VVG 3927
>AY074797-1|AAL74290.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 protein.
Length = 4074
Score = 29.1 bits (62), Expect = 9.4
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 48 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 105
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 106 VAG 108
V G
Sbjct: 3925 VVG 3927
>AL590391-1|CAH72781.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 4074
Score = 29.1 bits (62), Expect = 9.4
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 48 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 105
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 106 VAG 108
V G
Sbjct: 3925 VVG 3927
>AL391221-1|CAI16676.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 4074
Score = 29.1 bits (62), Expect = 9.4
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 48 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 105
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 106 VAG 108
V G
Sbjct: 3925 VVG 3927
>AL355997-1|CAI20233.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 4074
Score = 29.1 bits (62), Expect = 9.4
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 48 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 105
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 106 VAG 108
V G
Sbjct: 3925 VVG 3927
>AL157774-1|CAH73867.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 4074
Score = 29.1 bits (62), Expect = 9.4
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 48 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 105
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 106 VAG 108
V G
Sbjct: 3925 VVG 3927
>AL121946-1|CAI20324.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 (autosomal recessive) protein.
Length = 4074
Score = 29.1 bits (62), Expect = 9.4
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 48 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 105
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 106 VAG 108
V G
Sbjct: 3925 VVG 3927
>AF480064-1|AAM44232.1| 4074|Homo sapiens polycystic kidney and
hepatic disease 1 protein.
Length = 4074
Score = 29.1 bits (62), Expect = 9.4
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 48 VAGALLICAAMCCWL-QSPARQPQNER-ASTDTHQIDDPIHVISMPDEETMQQKPPDYDT 105
VA L + +CCWL +S +R+ + E + T+ + IH+ S E Q P DT
Sbjct: 3868 VASWLALSCLVCCWLKRSKSRKTKPEEIPESQTNNQNIHIHISSKRRE---SQGPKKEDT 3924
Query: 106 VAG 108
V G
Sbjct: 3925 VVG 3927
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.136 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,932,730
Number of Sequences: 224733
Number of extensions: 1105817
Number of successful extensions: 1915
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1912
Number of HSP's gapped (non-prelim): 11
length of query: 184
length of database: 73,234,838
effective HSP length: 86
effective length of query: 98
effective length of database: 53,907,800
effective search space: 5282964400
effective search space used: 5282964400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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