GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005341-TA|BGIBMGA005341-PA|undefined
         (184 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   7.2  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   7.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.2  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
          protein.
          Length = 116

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 14 RYGMVLLCAGALINWLGLAEDYAEPVRYVGVACIVA 49
          R+  +++   +L+ W    E Y++   YV +  I+A
Sbjct: 2  RHNYIVILILSLLTWTYAEELYSDKYDYVNIDEILA 37


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
          protein.
          Length = 116

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 14 RYGMVLLCAGALINWLGLAEDYAEPVRYVGVACIVA 49
          R+  +++   +L+ W    E Y++   YV +  I+A
Sbjct: 2  RHNYIVILILSLLTWTYAEELYSDKYDYVNIDEILA 37


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/37 (24%), Positives = 15/37 (40%)

Query: 63   QSPARQPQNERASTDTHQIDDPIHVISMPDEETMQQK 99
            Q P +Q Q ++      Q   P      P ++  QQ+
Sbjct: 1503 QQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQ 1539


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,484
Number of Sequences: 429
Number of extensions: 1696
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 184
length of database: 140,377
effective HSP length: 54
effective length of query: 130
effective length of database: 117,211
effective search space: 15237430
effective search space used: 15237430
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)