Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005339-TA|BGIBMGA005339-PA|undefined
(327 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050291-1|AAH50291.1| 547|Homo sapiens glucocorticoid induced ... 55 3e-07
BC106907-1|AAI06908.1| 345|Homo sapiens amyotrophic lateral scl... 43 0.001
BC106906-1|AAI06907.1| 345|Homo sapiens amyotrophic lateral scl... 43 0.001
BC065010-1|AAH65010.1| 394|Homo sapiens ALS2CR13 protein protein. 43 0.001
AK096090-1|BAC04700.1| 345|Homo sapiens protein ( Homo sapiens ... 43 0.001
AC098831-1|AAY24090.1| 269|Homo sapiens unknown protein. 43 0.001
AB053315-1|BAB69023.1| 191|Homo sapiens ALS2CR13 protein. 40 0.016
BC065199-1|AAH65199.1| 453|Homo sapiens family with sequence si... 35 0.34
BC037572-1|AAH37572.1| 453|Homo sapiens family with sequence si... 35 0.34
AF123073-1|AAK01477.1| 453|Homo sapiens C/EBP-induced protein p... 35 0.34
BX640673-1|CAE45805.1| 648|Homo sapiens hypothetical protein pr... 33 1.4
BC126307-1|AAI26308.1| 986|Homo sapiens MYOCD protein protein. 33 1.4
AY764180-1|AAV33439.1| 986|Homo sapiens myocardin protein. 33 1.4
AK097821-1|BAC05177.1| 684|Homo sapiens protein ( Homo sapiens ... 33 1.4
AF532596-1|AAN33040.1| 938|Homo sapiens myocardin transcription... 33 1.4
AL360181-6|CAH70281.1| 158|Homo sapiens dopamine receptor D1 in... 33 1.8
>BC050291-1|AAH50291.1| 547|Homo sapiens glucocorticoid induced
transcript 1 protein.
Length = 547
Score = 55.2 bits (127), Expect = 3e-07
Identities = 86/305 (28%), Positives = 123/305 (40%), Gaps = 69/305 (22%)
Query: 43 PTMSPTNMWRRISPDHALSGQRSPGAINYKGKGRFGSSVIRRTASLDTL---YHKGQWPR 99
P SP + R SP+ G A K + SS IRRT+SLDT+ Y GQWPR
Sbjct: 128 PRRSPESHRRSSSPERRSPGSPVCRADKAKSQQVRTSSTIRRTSSLDTITGPYLTGQWPR 187
Query: 100 DYYLHAGQLQVDKXXXX----XXXXXXXXXXXXXXXXXKLDRF------LRSRLQRPYKP 149
D ++H DK D+ LR +LQR +
Sbjct: 188 DPHVHYPSCMKDKATQTPSCWAEEGAEKRSHQRSASWGSADQLKEQIAKLRQQLQRSKQS 247
Query: 150 SASG-----DYSVH--TMTTALWSRFGSGNVPLRAARSSV------------EGLNQEIE 190
S +H +T + GS +VP+ + SV EG++ E+E
Sbjct: 248 SRHSKEKDRQSPLHGNHITISHTQATGSRSVPMPLSNISVPKSSVSRVPCNVEGISPELE 307
Query: 191 RLVLYPASGTQTTHLDRLRDKVTPEGHRAPLAELLR----RSVNTQTP----HDLSHTAH 242
++ + +G + + + D P+G RAPL R RS++TQTP S ++H
Sbjct: 308 KVFIKENNGKE--EVSKPLD--IPDGRRAPLPAHYRSSSTRSIDTQTPSVQERSSSCSSH 363
Query: 243 -----------SSGGSVCSSPDL-------DGS-----KLGTSPQINR--FLAREPPDGC 277
S GS CS+ DL GS K +SP+ N REPP+GC
Sbjct: 364 SPCVSPFCPPESQDGSPCSTEDLLYDRDKDSGSSSPLPKYASSPKPNNSYMFKREPPEGC 423
Query: 278 EKVNL 282
E+V +
Sbjct: 424 ERVKV 428
>BC106907-1|AAI06908.1| 345|Homo sapiens amyotrophic lateral
sclerosis 2 (juvenile) chromosome region, candidate 13
protein.
Length = 345
Score = 43.2 bits (97), Expect = 0.001
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 179 RSSVEGLNQEIERLVLYPASGTQTTHLDRLRDKVTPEGHRAPLAELLR----RSVNTQTP 234
R+SVEGLNQEIE ++ +G + ++L + P+GHRAP + R RS++TQTP
Sbjct: 99 RNSVEGLNQEIE--IIIKETGEKE---EQLIPQDIPDGHRAPPPLVQRSSSTRSIDTQTP 153
Query: 235 HDLSHTAHSSGGSVCSSP 252
+++S S SP
Sbjct: 154 GGADRGSNNSSRSQSVSP 171
>BC106906-1|AAI06907.1| 345|Homo sapiens amyotrophic lateral
sclerosis 2 (juvenile) chromosome region, candidate 13
protein.
Length = 345
Score = 43.2 bits (97), Expect = 0.001
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 179 RSSVEGLNQEIERLVLYPASGTQTTHLDRLRDKVTPEGHRAPLAELLR----RSVNTQTP 234
R+SVEGLNQEIE ++ +G + ++L + P+GHRAP + R RS++TQTP
Sbjct: 99 RNSVEGLNQEIE--IIIKETGEKE---EQLIPQDIPDGHRAPPPLVQRSSSTRSIDTQTP 153
Query: 235 HDLSHTAHSSGGSVCSSP 252
+++S S SP
Sbjct: 154 GGADRGSNNSSRSQSVSP 171
>BC065010-1|AAH65010.1| 394|Homo sapiens ALS2CR13 protein protein.
Length = 394
Score = 43.2 bits (97), Expect = 0.001
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 179 RSSVEGLNQEIERLVLYPASGTQTTHLDRLRDKVTPEGHRAPLAELLR----RSVNTQTP 234
R+SVEGLNQEIE ++ +G + ++L + P+GHRAP + R RS++TQTP
Sbjct: 148 RNSVEGLNQEIE--IIIKETGEKE---EQLIPQDIPDGHRAPPPLVQRSSSTRSIDTQTP 202
Query: 235 HDLSHTAHSSGGSVCSSP 252
+++S S SP
Sbjct: 203 GGADRGSNNSSRSQSVSP 220
Score = 37.5 bits (83), Expect = 0.064
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 79 SSVIRRTASLDTL---YHKGQWPRDYYLHAGQLQVDK 112
SS+IRRT+SLDTL Y G WPRD + A DK
Sbjct: 17 SSIIRRTSSLDTLAAPYLAGHWPRDSHGQAAPCMRDK 53
>AK096090-1|BAC04700.1| 345|Homo sapiens protein ( Homo sapiens
cDNA FLJ38771 fis, clone KIDNE2016388. ).
Length = 345
Score = 43.2 bits (97), Expect = 0.001
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 179 RSSVEGLNQEIERLVLYPASGTQTTHLDRLRDKVTPEGHRAPLAELLR----RSVNTQTP 234
R+SVEGLNQEIE ++ +G + ++L + P+GHRAP + R RS++TQTP
Sbjct: 99 RNSVEGLNQEIE--IIIKETGEKE---EQLIPQDIPDGHRAPPPLVQRSSSTRSIDTQTP 153
Query: 235 HDLSHTAHSSGGSVCSSP 252
+++S S SP
Sbjct: 154 GGADRGSNNSSRSQSVSP 171
>AC098831-1|AAY24090.1| 269|Homo sapiens unknown protein.
Length = 269
Score = 43.2 bits (97), Expect = 0.001
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 179 RSSVEGLNQEIERLVLYPASGTQTTHLDRLRDKVTPEGHRAPLAELLR----RSVNTQTP 234
R+SVEGLNQEIE ++ +G + ++L + P+GHRAP + R RS++TQTP
Sbjct: 23 RNSVEGLNQEIE--IIIKETGEKE---EQLIPQDIPDGHRAPPPLVQRSSSTRSIDTQTP 77
Query: 235 HDLSHTAHSSGGSVCSSP 252
+++S S SP
Sbjct: 78 GGADRGSNNSSRSQSVSP 95
>AB053315-1|BAB69023.1| 191|Homo sapiens ALS2CR13 protein.
Length = 191
Score = 39.5 bits (88), Expect = 0.016
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 26/98 (26%)
Query: 41 NSPTMSPTNMW---------------RRISPDHALSG--QRSPGAINYKGKGRFG----- 78
+SP+ SPT++W RR SP+ + S +RSP A K +
Sbjct: 53 SSPSSSPTHLWTGEVSAVPPPARVRHRRRSPEQSRSSPEKRSPSAPVCKAGDKTRQPSSS 112
Query: 79 -SSVIRRTASLDTL---YHKGQWPRDYYLHAGQLQVDK 112
SS+IRRT+SLDTL Y G WPRD + A DK
Sbjct: 113 PSSIIRRTSSLDTLAAPYLAGHWPRDSHGQAAPCMRDK 150
>BC065199-1|AAH65199.1| 453|Homo sapiens family with sequence
similarity 117, member A protein.
Length = 453
Score = 35.1 bits (77), Expect = 0.34
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 153 GDYSVHTMTTALWSRFGSGNVPLRAA---RSSVEGLNQEIERLVLYPASGTQTTHLDRLR 209
GD++V A F SG+ LR + S+EGLNQE+E V G + L R+
Sbjct: 182 GDHAVRGALRASPPSFPSGSPVLRLSPCLHRSLEGLNQELEE-VFVKEQGEE--ELLRIL 238
Query: 210 DKVTPEGHRAP 220
D P+GHRAP
Sbjct: 239 D--IPDGHRAP 247
>BC037572-1|AAH37572.1| 453|Homo sapiens family with sequence
similarity 117, member A protein.
Length = 453
Score = 35.1 bits (77), Expect = 0.34
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 153 GDYSVHTMTTALWSRFGSGNVPLRAA---RSSVEGLNQEIERLVLYPASGTQTTHLDRLR 209
GD++V A F SG+ LR + S+EGLNQE+E V G + L R+
Sbjct: 182 GDHAVRGALRASPPSFPSGSPVLRLSPCLHRSLEGLNQELEE-VFVKEQGEE--ELLRIL 238
Query: 210 DKVTPEGHRAP 220
D P+GHRAP
Sbjct: 239 D--IPDGHRAP 247
>AF123073-1|AAK01477.1| 453|Homo sapiens C/EBP-induced protein
protein.
Length = 453
Score = 35.1 bits (77), Expect = 0.34
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 153 GDYSVHTMTTALWSRFGSGNVPLRAA---RSSVEGLNQEIERLVLYPASGTQTTHLDRLR 209
GD++V A F SG+ LR + S+EGLNQE+E V G + L R+
Sbjct: 182 GDHAVRGALRASPPSFPSGSPVLRLSPCLHRSLEGLNQELEE-VFVKEQGEE--ELLRIL 238
Query: 210 DKVTPEGHRAP 220
D P+GHRAP
Sbjct: 239 D--IPDGHRAP 247
>BX640673-1|CAE45805.1| 648|Homo sapiens hypothetical protein
protein.
Length = 648
Score = 33.1 bits (72), Expect = 1.4
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 166 SRFGSGNVPLRAARSSVEGLNQEIERLVLYPASGTQTTHLDRLRDKVTPEGHRAPLAELL 225
S F G +P V L Q++ R+ P SGT+T +DRLR G+ P +
Sbjct: 65 SSFKPGPLPPNLDDLKVSELRQQL-RIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDI 123
Query: 226 RRSVNTQTPHDLSHTAHSSGGSVCSSPDLDGSKLGTSPQIN 266
TP+ L + SS S S+ +SP I+
Sbjct: 124 TTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPIS 164
>BC126307-1|AAI26308.1| 986|Homo sapiens MYOCD protein protein.
Length = 986
Score = 33.1 bits (72), Expect = 1.4
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 166 SRFGSGNVPLRAARSSVEGLNQEIERLVLYPASGTQTTHLDRLRDKVTPEGHRAPLAELL 225
S F G +P V L Q++ R+ P SGT+T +DRLR G+ P +
Sbjct: 360 SSFKPGPLPPNLDDLKVSELRQQL-RIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDI 418
Query: 226 RRSVNTQTPHDLSHTAHSSGGSVCSSPDLDGSKLGTSPQIN 266
TP+ L + SS S S+ +SP I+
Sbjct: 419 TTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPIS 459
>AY764180-1|AAV33439.1| 986|Homo sapiens myocardin protein.
Length = 986
Score = 33.1 bits (72), Expect = 1.4
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 166 SRFGSGNVPLRAARSSVEGLNQEIERLVLYPASGTQTTHLDRLRDKVTPEGHRAPLAELL 225
S F G +P V L Q++ R+ P SGT+T +DRLR G+ P +
Sbjct: 360 SSFKPGPLPPNLDDLKVSELRQQL-RIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDI 418
Query: 226 RRSVNTQTPHDLSHTAHSSGGSVCSSPDLDGSKLGTSPQIN 266
TP+ L + SS S S+ +SP I+
Sbjct: 419 TTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPIS 459
>AK097821-1|BAC05177.1| 684|Homo sapiens protein ( Homo sapiens
cDNA FLJ40502 fis, clone TESTI2045199. ).
Length = 684
Score = 33.1 bits (72), Expect = 1.4
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 166 SRFGSGNVPLRAARSSVEGLNQEIERLVLYPASGTQTTHLDRLRDKVTPEGHRAPLAELL 225
S F G +P V L Q++ R+ P SGT+T +DRLR G+ P +
Sbjct: 264 SSFKPGPLPPNLDDLKVSELRQQL-RIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDI 322
Query: 226 RRSVNTQTPHDLSHTAHSSGGSVCSSPDLDGSKLGTSPQIN 266
TP+ L + SS S S+ +SP I+
Sbjct: 323 TTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPIS 363
>AF532596-1|AAN33040.1| 938|Homo sapiens myocardin transcription
factor protein.
Length = 938
Score = 33.1 bits (72), Expect = 1.4
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 166 SRFGSGNVPLRAARSSVEGLNQEIERLVLYPASGTQTTHLDRLRDKVTPEGHRAPLAELL 225
S F G +P V L Q++ R+ P SGT+T +DRLR G+ P +
Sbjct: 360 SSFKPGPLPPNLDDLKVSELRQQL-RIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDI 418
Query: 226 RRSVNTQTPHDLSHTAHSSGGSVCSSPDLDGSKLGTSPQIN 266
TP+ L + SS S S+ +SP I+
Sbjct: 419 TTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPIS 459
>AL360181-6|CAH70281.1| 158|Homo sapiens dopamine receptor D1
interacting protein protein.
Length = 158
Score = 32.7 bits (71), Expect = 1.8
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Query: 229 VNTQTPHDLSHTAHSSGGSVCSSPDLDGSKLGTS-PQINRFLAREPPDGCEKVNLKAGEG 287
+ TQT + LS + PDL+G +L S P+ R + P + +
Sbjct: 48 IKTQTEYQLSSPDQQN------FPDLEGQRLNCSHPEEGRRVTTPTPPTVGTQDRRRRWK 101
Query: 288 AYTGAMSVIKPAVAGFTLRPSQGSAFQPLQPAPHHYPHTH 327
A GA +P LR + + P Q PH P TH
Sbjct: 102 AAGGAWVPSRPVWGPLALREERVAVSHPAQSWPHRLPCTH 141
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.315 0.130 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,438,434
Number of Sequences: 224733
Number of extensions: 2199531
Number of successful extensions: 4239
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 4219
Number of HSP's gapped (non-prelim): 31
length of query: 327
length of database: 73,234,838
effective HSP length: 90
effective length of query: 237
effective length of database: 53,008,868
effective search space: 12563101716
effective search space used: 12563101716
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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