Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005335-TA|BGIBMGA005335-PA|IPR009395|GCN5-like 1
(113 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr... 27 0.72
SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit R... 26 1.7
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 26 1.7
SPAC31G5.15 |||phosphatidylserine decarboxylase |Schizosaccharom... 25 2.2
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 25 2.2
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 25 2.2
SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 2.2
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 25 2.9
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 25 3.8
SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomy... 25 3.8
SPBC19G7.10c |||topoisomerase associated protein |Schizosaccharo... 24 5.1
SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|ch... 24 5.1
SPAC3H1.08c |||DUF1640 family protein|Schizosaccharomyces pombe|... 24 5.1
SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces p... 24 5.1
SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|ch... 24 6.7
SPBC3D6.06c |||ribose-phosphate pyrophosphokinase |Schizosacchar... 23 8.9
SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|c... 23 8.9
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 23 8.9
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 23 8.9
>SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 553
Score = 27.1 bits (57), Expect = 0.72
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 32 VAQAYLNQKKLDAE--AKLLH-QGAINFSKQTQQWLTLVENFSSAL---KEIGDVENWAR 85
+A +L+ K + E L + +G + TQ W L+ENF S L +E ++ W+
Sbjct: 468 IAIKFLDDAKCETEDSTNLTNREGEAEKTLNTQPWKNLIENFISELQAEEEENNITEWSD 527
Query: 86 --SIEND 90
S+ ND
Sbjct: 528 IISVRND 534
>SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit
Rec11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 923
Score = 25.8 bits (54), Expect = 1.7
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 14/69 (20%)
Query: 18 NDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKE- 76
NDL ++L + LN AY+ +KK++ + +L N + +TQ + + F KE
Sbjct: 695 NDLAESLHEQLN-----AYIQRKKINKKNQL------NGNDETQNLVLALNKFGCFAKEM 743
Query: 77 --IGDVENW 83
+ DV +W
Sbjct: 744 VCLRDVNDW 752
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 25.8 bits (54), Expect = 1.7
Identities = 18/84 (21%), Positives = 36/84 (42%)
Query: 25 VDHLNVGVAQAYLNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWA 84
+DHL + + + DA+ + H I + ++ Q+ A+K+ +A
Sbjct: 682 IDHLERAYRREAIPLWEEDAKQQAEHDREIFYEREKQRKEVQERKHEQAIKDKKAFAQFA 741
Query: 85 RSIENDMKIITDTLERAYEKAQEK 108
I + I D ++AY++A K
Sbjct: 742 SYIHAYKQNIDDERDKAYQEAYAK 765
>SPAC31G5.15 |||phosphatidylserine decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 980
Score = 25.4 bits (53), Expect = 2.2
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 29 NVGVAQAYLNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSIE 88
N+ + + + DA++K L + + K Q + + N S +LKE+ +V+N +E
Sbjct: 168 NLSLKWIIYDPEDADADSKTLAKAWLQQIKMNQTSIDPMSNISKSLKEL-EVDNVESDLE 226
Query: 89 N 89
+
Sbjct: 227 D 227
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 25.4 bits (53), Expect = 2.2
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 28 LNVGVAQAYLNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSI 87
L V + QKK AEA+ + + +++T WL + + +S+ K++ +N +++
Sbjct: 667 LKVNKPEMKEGQKK--AEARKKKESPLEATEETNPWLQVPDQRTSSAKKLD--KNSSKAD 722
Query: 88 ENDMKIITDTLERAYEKAQE 107
+ + K+ D + E +E
Sbjct: 723 KKNHKLKMDKVASLQELVEE 742
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 25.4 bits (53), Expect = 2.2
Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 11 KECITAANDLTQALVDH-LNVGVAQAYLNQKKLDAEAKLLHQGAINFSKQTQQW 63
++C + + L ++D N+ + Q++L K+L Q + FS++ W
Sbjct: 224 QKCPLSIHPLCNRILDVCFNISFPSLVIGQERLAVLTKILSQFPLEFSRRVVDW 277
>SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 684
Score = 25.4 bits (53), Expect = 2.2
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 34 QAYLNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVEN 82
+ Y Q DA +H G FSK+ WL + + ++++ D +N
Sbjct: 444 ELYGKQFYYDAVGIAVHNGGFYFSKKKMGWLKPNQPYLLSIQDPVDFQN 492
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.0 bits (52), Expect = 2.9
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 67 VENFSSALKEIGDVENWARSIENDMKIITDTLERAYEKAQEKPSSS 112
+E F +I ++ +R END + + ++ +EKA ++P+ S
Sbjct: 1021 LEKFDKISDQILEIAMQSRK-ENDGRTLKQVIQLTFEKATDEPNFS 1065
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 24.6 bits (51), Expect = 3.8
Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 20 LTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQGAINFSKQ-TQQWLTLVENF 70
+T +D N+ + QA L KK+DAE + ++ + +++ +W + + F
Sbjct: 174 MTGRELDKYNLKIRQAALAVKKMDAEYRETNELLLTVTREWIDRWTEVCDAF 225
>SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 874
Score = 24.6 bits (51), Expect = 3.8
Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 37 LNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFS-SALKEIGDVENWARSIE 88
L +++D+ + GAI K +QW + ++S L ++ + W ++
Sbjct: 191 LANEQVDSHGRSWRSGAIVEKKNLRQWFLKISDYSDQLLDDLETLPKWPDKVK 243
>SPBC19G7.10c |||topoisomerase associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 744
Score = 24.2 bits (50), Expect = 5.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 85 RSIENDMKIITDTLERAYEKAQEKPSSSQ 113
R EN M+ + L+R A+E+P ++Q
Sbjct: 379 RRSENPMQKLQQQLQRLVSSAKERPKATQ 407
>SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 24.2 bits (50), Expect = 5.1
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 1 MFLDPTEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQ 51
+ L P EQ IT N ++VD L +A+ L + +A +L Q
Sbjct: 201 IILKPVEQAVNHAITLVNTSPSSVVDALCRSLAELCLGLVQEAIDASILSQ 251
>SPAC3H1.08c |||DUF1640 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 24.2 bits (50), Expect = 5.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 38 NQKKLDAEAKLLHQGAINFSKQTQQWLT 65
N+ K+ E +LH+ + QT QW T
Sbjct: 167 NETKILNEVDILHKEINDMKIQTNQWFT 194
>SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 24.2 bits (50), Expect = 5.1
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 38 NQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKE-IGDVEN 82
N +K D+ K HQG N +QT+ + + KE I +VEN
Sbjct: 213 NAEKADSVTKEEHQGGSNTLQQTKDVGGAIAPAAEVGKEVINEVEN 258
>SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 525
Score = 23.8 bits (49), Expect = 6.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 49 LHQGAINFSKQTQQWLTLVENFSS 72
+H A+ FS+ W T V F+S
Sbjct: 467 IHLSALMFSRMNVHWATAVVGFAS 490
>SPBC3D6.06c |||ribose-phosphate pyrophosphokinase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 341
Score = 23.4 bits (48), Expect = 8.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 70 FSSALKEIGDVENWARSIENDMKIITDTLERAYEKAQEKPSS 111
+ ++L +GDV+N + +D+ TL RA E +E +S
Sbjct: 224 YGTSLMLVGDVQNKVAILIDDLIDTAYTLVRAAEFVKEHGAS 265
>SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 603
Score = 23.4 bits (48), Expect = 8.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 8 QKRKECITAANDLTQALVDHLNV 30
+ R+ CI AA + Q L + LN+
Sbjct: 458 ENRRICINAAREAVQLLKNRLNI 480
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 23.4 bits (48), Expect = 8.9
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 6 TEQKRKECITAANDLTQALVDHLNVGVAQAYLN-QKKLDAEAKL 48
T KR E +T +N L VDH + Y N +K + + KL
Sbjct: 1853 TFSKRLENLTTSNTLKSLSVDHFIRKHERKYFNGLRKQEIDVKL 1896
>SPCC338.07c |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 729
Score = 23.4 bits (48), Expect = 8.9
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 30 VGVAQAYLNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVE-NWA 84
V A+ Y+N KL+ L + Q +Q+ L + ++ L++ V NW+
Sbjct: 95 VQAAKCYINAHKLEKNNSSLLRDLALLQSQLRQYKALADTRNALLQDNPGVRANWS 150
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.125 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,384
Number of Sequences: 5004
Number of extensions: 17325
Number of successful extensions: 55
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 44
Number of HSP's gapped (non-prelim): 19
length of query: 113
length of database: 2,362,478
effective HSP length: 64
effective length of query: 49
effective length of database: 2,042,222
effective search space: 100068878
effective search space used: 100068878
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 48 (23.4 bits)
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