GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005334-TA|BGIBMGA005334-PA|undefined
         (181 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    26   0.19 
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    26   0.19 
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   1.3  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   4.0  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   5.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   5.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   5.3  

>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 103 KVYNNEKFYEDYA-VDIRYLYNIPQLLMYYLQCQIINLLCTSVAVE 147
           +V++ +K+   Y  VDI  + N  +LL  Y+ C +    CT  A E
Sbjct: 17  EVFSEDKYTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTPDAAE 62


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 103 KVYNNEKFYEDYA-VDIRYLYNIPQLLMYYLQCQIINLLCTSVAVE 147
           +V++ +K+   Y  VDI  + N  +LL  Y+ C +    CT  A E
Sbjct: 17  EVFSEDKYTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTPDAAE 62


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 163 YGPSTNLNLMKSAYG 177
           YGP  N+NL+K+  G
Sbjct: 30  YGPEANVNLLKNRTG 44


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 105 YNNEKFYEDYAVDIRYLYNIPQLLMYYL 132
           Y  ++ YE   +D  +L+ +  ++ YYL
Sbjct: 265 YTIDRLYELTKIDKWFLHKMKNIIDYYL 292


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 161 PGYGPSTNLNLMKSAYGNEV 180
           PG   +TN N MK+ + N +
Sbjct: 71  PGTSSATNPNAMKTIFKNTI 90


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/35 (25%), Positives = 19/35 (54%)

Query: 106 NNEKFYEDYAVDIRYLYNIPQLLMYYLQCQIINLL 140
           N+++  E+ A+      N+P+  +Y L C +  L+
Sbjct: 182 NSKRNSEESAICAMLKENMPEFPLYQLSCILFFLI 216


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)

Query: 47  GSQMML-VDGCDPDIREPSIR 66
           GS   L V GC PDI+E  I+
Sbjct: 356 GSSFFLAVMGCHPDIQEKVIQ 376


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.141    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,215
Number of Sequences: 429
Number of extensions: 2453
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 181
length of database: 140,377
effective HSP length: 54
effective length of query: 127
effective length of database: 117,211
effective search space: 14885797
effective search space used: 14885797
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 41 (20.6 bits)