Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005331-TA|BGIBMGA005331-PA|undefined
(392 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 33 0.069
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 32 0.16
SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces pomb... 31 0.28
SPCP1E11.04c |pal1||membrane associated protein Pal1 |Schizosacc... 30 0.65
SPBC582.10c |||ATP-dependent DNA helicase Rhp16b |Schizosaccharo... 30 0.65
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 29 1.5
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 28 2.0
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 28 2.6
SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog, Rhp... 27 3.4
SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|c... 27 4.6
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 27 6.0
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 27 6.0
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 6.0
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 26 8.0
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 33.1 bits (72), Expect = 0.069
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 310 SSDIDESTTNIGRKVRISPTAMSPPTARESSRR--PTAFVRPSDDNSDTEMR 359
S ++ ++ T G ++P S PTA S++ PT+ + DNSDTEM+
Sbjct: 67 SINLQKNLTPNGDSNTLTPDTFSDPTAPSSAQSVPPTSSAETTADNSDTEMK 118
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 31.9 bits (69), Expect = 0.16
Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 66 SLRATKRFLKNKQDIEKQLQSNQAENRQN-VDSDNQEFDVDVXXXXXXXXXXQHVSLTEP 124
SL A K N Q+ +++ NQAE +++ S+N+ +V ++T+P
Sbjct: 280 SLDADKELATNDQEDDEE--ENQAETQKDGAISNNENMQSEVQTTNPSASTSAVTNITKP 337
Query: 125 SVVTNEEKPYYLPLTDVPYPDEVDSVYDLKK 155
+++ N P + + V P+ ++ + K
Sbjct: 338 TLIQNPSTPLSVSNSKVASPETPNATHTAPK 368
>SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 31.1 bits (67), Expect = 0.28
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 214 EKEIRKYIKMNVDRVSFAGDVIRNIAGGTGKFNLFQDFRKSELITDDELRRF--RKVSIS 271
EK + Y+++ F VI+NI + ++ + + L ++ R +SIS
Sbjct: 406 EKSLETYLQIKKMHQLFPYTVIKNIMRFSNPLSVMKRILDTLLAQPFGMKSLFQRLLSIS 465
Query: 272 LPDEAKQVHTKIKRRQTGFVRPEDLERI 299
L + + +H I R + V PE L +I
Sbjct: 466 LNENVRAIHKLISRYEARIVSPEILTKI 493
>SPCP1E11.04c |pal1||membrane associated protein Pal1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 29.9 bits (64), Expect = 0.65
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 10/79 (12%)
Query: 280 HTKIKRRQTGFVRPEDLERIHIIQKPSFDESSDIDESTTNIGRKVRISPTAMSPPTARES 339
H+ + R++ P L+ I S + SD D+S T G + R SPTA PP +R
Sbjct: 331 HSSMGTRRSPLNSPSQLDPI------SNENESDTDDSNT--GLRNRTSPTAAPPPPSRRK 382
Query: 340 SRRPTAFVRPSDDNSDTEM 358
+ RP +++++M
Sbjct: 383 TGGLN--TRPYPQHAESQM 399
>SPBC582.10c |||ATP-dependent DNA helicase Rhp16b
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 29.9 bits (64), Expect = 0.65
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 138 LTDVPYPDEVDSVYDLKKFLKGNYCLESDLKKDQIFL 174
LT P + VD +Y L KFL N + + KDQI L
Sbjct: 411 LTGTPLQNNVDELYSLVKFLHINPFNDQSVWKDQISL 447
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 28.7 bits (61), Expect = 1.5
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 258 TDDELRRFRKVSISLPDEAKQVHTKIKRRQTGFVRPEDLERIHIIQKPSFDESSDIDEST 317
TDD + S+PD A TK+ ++P D ++ + + + +DE T
Sbjct: 849 TDDTQAKEAPKEASIPDNASTASTKVS--NDSHLKP-DADKKSVSSELTHASKPSLDEKT 905
Query: 318 TNIGRKVRISPTAMSPPT 335
+ +++ +S PT
Sbjct: 906 MQLAKQIAVSFHGYEAPT 923
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 28.3 bits (60), Expect = 2.0
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 262 LRRFRKVSISLPDEAKQVHTKIKRRQTGFVRPEDLERIHIIQKPSFDESSDIDE----ST 317
L ++++S + K+V + QT PE LE I PSF S D+ +
Sbjct: 1212 LPSYKELSKIAAAQIKKVFLERPLSQTPLDLPETLENTQIDIYPSFKTESTDDQLEKVTQ 1271
Query: 318 TNIGRKVRISPTAMS 332
TN+ R++P A S
Sbjct: 1272 TNVASNKRVAPYADS 1286
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 27.9 bits (59), Expect = 2.6
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 274 DEAKQVHTKIKRRQTGFVRPEDLERIHIIQKPSFDESSDI----DESTTNIGRKVRISPT 329
+E K++ ++R ++ + ++ K + + D+ N+ R VRI +
Sbjct: 758 EEKKRIERSARQRLQALRADDEAAYLQLLDKAKDTRITHLLKQTDQYLENLTRAVRIQQS 817
Query: 330 AM-SPPTARESSRRPTAFVRPSDDNSDTEMRRSVLTRLYEEVTATDEIPGPTLKDYK 385
+ S T+ + S S+++ + + + V R++EEV G TLKDY+
Sbjct: 818 NIHSGNTSGKGSNSAELEAPISEEDKNLDYFK-VAHRIHEEVEQPKIFVGGTLKDYQ 873
>SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog,
Rhp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 27.5 bits (58), Expect = 3.4
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 252 RKSELITDDELRRF--RKVSISLPDEAKQVHTKIKR 285
+ S+ I+DDEL + RKV IS P KQ HT +KR
Sbjct: 87 QSSQDISDDELIQHDSRKV-ISSPYSPKQTHTVLKR 121
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 323 KVRISPTAMSPPTARESSRRPTAFVRPSDDNSD-TEMRRSVLTR 365
+V +P A P T+ + +R +F PS + D TE + S T+
Sbjct: 231 RVESTPPAFLPETSEKQYKRKFSFTEPSSEKVDNTETKFSKKTK 274
>SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 581
Score = 27.1 bits (57), Expect = 4.6
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 295 DLERIHIIQKPSFDESSDIDESTTNIGRKVRISPTAMSPPTARESSRRPTAFVRPSDDNS 354
DL+ + KP ++S +D+S + V A+ P ++ S + A + P++ S
Sbjct: 264 DLKDMQSDIKPDVEKSDAMDDSKMKVDYTVNEISNAVQPIYSKPSYWKRIALITPANSLS 323
Query: 355 DTEMRRSVLTRLYE 368
R+ ++ RL++
Sbjct: 324 GIGFRQYIM-RLFQ 336
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 300 HIIQKPSFDESSDIDESTTNIGRKVRISPTAMSPPTARESSRRP----TAFVRPSDDNSD 355
+I+ PSF + + + NI I PT++S + E S++ F +D++
Sbjct: 727 NILSPPSFQSPTALGDPGDNIASSPLILPTSVSAFSYDEKSQKQKTELATFTTYKEDDTT 786
Query: 356 TEMRRSV 362
T R S+
Sbjct: 787 TTTRTSI 793
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 26.6 bits (56), Expect = 6.0
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 236 RNIAGGTGK--FNLF-QDFRKSELITDDELRRFRKVSISLPDEAKQVHTKIKRRQTGFVR 292
RN G + +N F Q F+ +LI + E + S+ L + K Q G++R
Sbjct: 228 RNFRGKSNSAFYNDFIQSFKSEDLIQEYESSLLLEPSLRLRISYLALFLK-NTLQFGYIR 286
Query: 293 PEDLERIHIIQKPSFDE--SSDIDESTTN 319
++ +++++ P +D+ ++ ST N
Sbjct: 287 KKENVNLNLVKTPKYDDLTKMNLSSSTAN 315
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.6 bits (56), Expect = 6.0
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 207 ESLASDDEKEIRKYIKMNVDRVSFAGDVIRNIAGGTGKFNLFQDFRKSELITDDELRRFR 266
+ L ++ E+ I+ Y ++NV ++ D RN K + + + D++LRRF
Sbjct: 544 DRLINELEQRIKSY-EVNVSELNGTIDEYRNKL--KDKEETYNEVMNAFQYKDNDLRRFH 600
Query: 267 KVSISLPDEAKQVHTKIKRR 286
+ L D K++ + ++++
Sbjct: 601 ESINKLQDREKELTSNLEKK 620
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 26.2 bits (55), Expect = 8.0
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 253 KSELITDDELRRFRKVSISLPDEAKQVHTKIKRRQTGFVRP-EDLERIHIIQKPSFDE-- 309
K +LI E R + S + PD +Q K KR+ T P ++E + Q PS D+
Sbjct: 218 KKDLIDFSETRPLAQASRATPDIKEQHAKKPKRKHTRSTVPTSNVEPVSQPQ-PSPDKIV 276
Query: 310 SSDIDESTTNIGRKVR---ISPTAMSPPTAR 337
SS S +K R +S + +PPTA+
Sbjct: 277 SSPNPPSAKREKKKRRKSSMSSSITTPPTAK 307
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.134 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,654,582
Number of Sequences: 5004
Number of extensions: 66715
Number of successful extensions: 249
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 244
Number of HSP's gapped (non-prelim): 17
length of query: 392
length of database: 2,362,478
effective HSP length: 74
effective length of query: 318
effective length of database: 1,992,182
effective search space: 633513876
effective search space used: 633513876
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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