Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005305-TA|BGIBMGA005305-PA|IPR007087|Zinc finger,
C2H2-type
(1488 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 46 3e-06
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 40 2e-04
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 38 8e-04
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 30 0.16
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 29 0.21
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 29 0.28
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 27 1.1
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 27 1.1
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 26 2.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 6.1
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 24 8.0
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 45.6 bits (103), Expect = 3e-06
Identities = 42/198 (21%), Positives = 73/198 (36%), Gaps = 37/198 (18%)
Query: 33 TKKRCTNETEEANPKPNINTELVGCDVCSEVFPTISRAITHKHKVHPDHDAKYFCPWCGK 92
T C +ET P NI + C +C + F + +H + + Y C CGK
Sbjct: 44 TSPACGSET----PLTNIEEKTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGK 99
Query: 93 LFTLKHLYNKHLQSNHDELDRTVEKLFHCDTCNIDFNIPSAMLYHNKFFHRQDTDIPELG 152
F + +H +++ T EK + C+ C+ F++ + H +
Sbjct: 100 TFAVPARLTRHYRTH------TGEKPYQCEYCSKSFSVKENLSVHRRI------------ 141
Query: 153 QSTKLRAYSQISIPIYYCAFCGEEYENKVNLHKHIIDEHGDENQSPQDVMRCPLCQAIFF 212
TK R Y C C +E+ LH+H+ G+ +C +C F
Sbjct: 142 -HTKERPYK--------CDVCERAFEHSGKLHRHMRIHTGERPH------KCTVCSKTFI 186
Query: 213 HLDAYELHLTFHSSDDLY 230
+H+ H+ + Y
Sbjct: 187 QSGQLVIHMRTHTGEKPY 204
Score = 40.7 bits (91), Expect = 9e-05
Identities = 36/186 (19%), Positives = 69/186 (37%), Gaps = 21/186 (11%)
Query: 57 CDVCSEVFPTISRAITHKHKVHPDHDAKYFCPWCGKLFTLKHLYNKHLQSNHDELDRTVE 116
C+ CS+ F H+ ++H + Y C C + F ++H++ + T E
Sbjct: 122 CEYCSKSFSVKENLSVHR-RIHTK-ERPYKCDVCERAFEHSGKLHRHMRIH------TGE 173
Query: 117 KLFHCDTCNIDFNIPSAMLYHNKFFHRQDTDIPEL-------GQSTKLRAYSQISIPIYY 169
+ C C+ F ++ H + + + + + K+ + Y
Sbjct: 174 RPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKPYT 233
Query: 170 CAFCGEEYENKVNLHKHIIDEHGDENQSPQDVMRCPLCQAIFFHLDAYELHLTFHSSDDL 229
C CG+ + L H + +G++ V +C LC F ELH+ HS +
Sbjct: 234 CDICGKSFGYNHVLKLHQVAHYGEK------VYKCTLCHETFGSKKTMELHIKTHSDSSV 287
Query: 230 YGGKNE 235
G +
Sbjct: 288 VGSPRD 293
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 39.5 bits (88), Expect = 2e-04
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 167 IYYCAFCGEEYENKVNLHKHIIDEHGDENQSPQDVMRCPLCQAIFFHLDAYELHL-TFHS 225
++ C CG+ +K +L +H+ D+H + Q+ RC +C+ ++ ++ H+ T+H
Sbjct: 5 LFTCQLCGKVLCSKASLKRHVADKHAER----QEEYRCVICERVYCSRNSLMTHIYTYHK 60
Query: 226 S 226
S
Sbjct: 61 S 61
Score = 25.0 bits (52), Expect = 4.6
Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 85 YFCPWCGKLFTLKHLYNKHLQSNHDELDRTVEKLFHCDTCNIDFNIPSAMLYHNKFFHR 143
+ C CGK+ K +H+ H E ++ + C C + ++++ H +H+
Sbjct: 6 FTCQLCGKVLCSKASLKRHVADKHAER----QEEYRCVICERVYCSRNSLMTHIYTYHK 60
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 37.5 bits (83), Expect = 8e-04
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 87 CPWCGKLFTLKHLYNKHLQSNHDELDRTVEKLFHCDTCNIDFNIPSAMLYHNKFFHR 143
CP+C + F+ + +H Q H++ D L+ C+ CN + +++ H HR
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSD----TLYVCEFCNRRYRTKNSLTTHKSLQHR 60
Score = 27.5 bits (58), Expect = 0.86
Identities = 12/52 (23%), Positives = 16/52 (30%)
Query: 57 CDVCSEVFPTISRAITHKHKVHPDHDAKYFCPWCGKLFTLKHLYNKHLQSNH 108
C C F H H D Y C +C + + K+ H H
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQH 59
Score = 24.6 bits (51), Expect = 6.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 167 IYYCAFCGEEYENKVNLHKHIIDEH 191
+Y C FC Y K +L H +H
Sbjct: 35 LYVCEFCNRRYRTKNSLTTHKSLQH 59
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 29.9 bits (64), Expect = 0.16
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Query: 53 ELVGCDVCSEVFPTISRAITHKHKVHPD---HDAKYFCPWCGKLFTLKHLYNKHLQSNH- 108
+L G S P+ A+ H +H + Y C CGK + K +H + H
Sbjct: 337 DLAGTSQGSAGLPSAILAMRLSHPLHGNLLPPGVCYTCDVCGKTLSTKLTLKRHKEQQHF 396
Query: 109 DELDRTVEKLFHCDTCNIDFNIPSAMLYHNKFFHRQ 144
L+ V C C+ F +++ H +HR+
Sbjct: 397 QPLNSAV-----CALCHKVFRTLNSLNNHKSIYHRR 427
Score = 29.5 bits (63), Expect = 0.21
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 168 YYCAFCGEEYENKVNLHKHIIDEHGDENQSPQDVMRCPLCQAIFFHLDAYELHLTFH 224
Y C CG+ K+ L +H +H P + C LC +F L++ H + +
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQH----FQPLNSAVCALCHKVFRTLNSLNNHKSIY 424
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 29.5 bits (63), Expect = 0.21
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Query: 87 CPWCGKLFTLKHLYNKHLQSNHDELDRTVEKLFHCDTCNIDF 128
CP C K FT H HL++ H L T EK +HC C+ F
Sbjct: 12 CPECHKRFTRDH----HLKT-HMRL-HTGEKPYHCSHCDRQF 47
Score = 24.2 bits (50), Expect = 8.0
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Query: 168 YYCAFCGEEYENKVNLHKHIIDEHGDENQSPQDVMRCPLCQA 209
Y+C+ C ++ NL +H+ G+ + C LC A
Sbjct: 38 YHCSHCDRQFVQVANLRRHLRVHTGERPYA------CELCAA 73
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 29.1 bits (62), Expect = 0.28
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 10/72 (13%)
Query: 57 CDVCSEVFPTISRAITHKHKVHPDHDAKYFCPWCGKLFTLKHLYNKHLQSNHDELDRTVE 116
C C +V+ ++ H H C CGK F+ L H++++ T E
Sbjct: 19 CKYCEKVYVSLGALKMHIRT----HTLPCKCHLCGKAFSRPWLLQGHIRTH------TGE 68
Query: 117 KLFHCDTCNIDF 128
K F C CN F
Sbjct: 69 KPFSCQHCNRAF 80
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 27.1 bits (57), Expect = 1.1
Identities = 21/96 (21%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 472 LHESENHDDIENNLKTCEEDHQSQLDNLEMNASTESKVKPIKE-PITSLVAYNNVEVNEE 530
L E + +E+N++ + LDNL+ TE++++ I + + + + + N+
Sbjct: 146 LRELHTLEIVESNVQALPVNSLCSLDNLQTLNLTENRLRDINDIGLNRRDSDDGSDGNDG 205
Query: 531 DDFSTQNSCDNLDNFENDIQDQKITDSTDLLENKNL 566
D+ S + LD N+I ++ +++ LL+ + L
Sbjct: 206 DESSCRADIRILDLSRNEI--TRLQENSPLLDLRQL 239
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 27.1 bits (57), Expect = 1.1
Identities = 10/52 (19%), Positives = 23/52 (44%)
Query: 57 CDVCSEVFPTISRAITHKHKVHPDHDAKYFCPWCGKLFTLKHLYNKHLQSNH 108
C+ C+++ +++R H VH + C C ++++ + H H
Sbjct: 5 CEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYH 56
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 25.8 bits (54), Expect = 2.6
Identities = 25/132 (18%), Positives = 55/132 (41%), Gaps = 6/132 (4%)
Query: 846 LLKHLKHITAKPINQ--VIKGTI-PKIVNRS-PKHTLDINKKMKKTNI-KVERNEDNIEV 900
+ + K + K +N ++K T+ PK+ + K+T + + +++ N+ +
Sbjct: 318 IYRRKKTVPLKKVNSKYILKSTLTPKLARKQFQKNTTGLERSRSWSSLDNTNTNDQDYSS 377
Query: 901 FNIDDSDSDXXXXXXXXXXXXMDQK-SIDALKHLNKTVTVKPLKSTEPSPKVHSGDFILP 959
N S DQK SI+++ +N T + KP ++H+ + P
Sbjct: 378 QNYLTVHSFPSTLNIPSVKIDEDQKCSIESITSVNSTSSPKPFPRRATLAQLHNFTTMTP 437
Query: 960 EEPPNVVIKKER 971
+E + ++ R
Sbjct: 438 QEIAQWIDRRSR 449
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.6 bits (51), Expect = 6.1
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Query: 1307 PVPNVQSPRFGKPLKVSPGAIINPKRPNSED-GPFSCFKKPKESLLPISESSNLGPNDDG 1365
P+ V + GKPL + A++ + ED G + CF + + + LG G
Sbjct: 335 PIKTVSWLKDGKPLGLEE-AVLRIESVKKEDKGMYQCFVRNDQESAQATAELKLG----G 389
Query: 1366 HVEFASSSQTSKNFMSATKSIKGNSMVSCVQMKSETSASSYQLN--KLSNMSGLKV 1419
E Q + F T + + CV + T +++L+ +LSN L+V
Sbjct: 390 RFE---PPQIRQAFAEETLQPGPSMFLKCVASGNPTPEITWELDGKRLSNTERLQV 442
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 24.2 bits (50), Expect = 8.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 322 GIDIQGVEEVPTRAITKRLKVL 343
GI QGV ++ +R +T LKV+
Sbjct: 11 GITCQGVTDIHSRNLTNSLKVI 32
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.308 0.126 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,282
Number of Sequences: 429
Number of extensions: 16148
Number of successful extensions: 53
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 22
length of query: 1488
length of database: 140,377
effective HSP length: 67
effective length of query: 1421
effective length of database: 111,634
effective search space: 158631914
effective search space used: 158631914
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 50 (24.2 bits)
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