GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005300-TA|BGIBMGA005300-PA|IPR000101|Gamma-
glutamyltranspeptidase
         (504 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    27   0.48 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    27   0.48 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.5  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    23   5.9  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 26.6 bits (56), Expect = 0.48
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 328 VSVTSSINFYYGAGFSTLNTGIVMNNVMDDFSSPGIINYFGLKPSPANFIAPGK-RPLSS 386
           +SVT+ I       +S  NT + ++N     SS G  +   +KP  A+ I PG   P   
Sbjct: 9   MSVTAIIQGTQAQHWSRGNTWLSLDNSNMSMSSVGPQSPLDMKPDTASLINPGNFSPSGP 68

Query: 387 MSP 389
            SP
Sbjct: 69  NSP 71


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 26.6 bits (56), Expect = 0.48
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 328 VSVTSSINFYYGAGFSTLNTGIVMNNVMDDFSSPGIINYFGLKPSPANFIAPGK-RPLSS 386
           +SVT+ I       +S  NT + ++N     SS G  +   +KP  A+ I PG   P   
Sbjct: 9   MSVTAIIQGTQAQHWSRGNTWLSLDNSNMSMSSVGPQSPLDMKPDTASLINPGNFSPSGP 68

Query: 387 MSP 389
            SP
Sbjct: 69  NSP 71


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 234 ASINSTENMILTYHRIIES-FKYAYATRTKLGDMEFLDLKEL 274
           A  +  +N+ +   + IE+ FKY Y +     +M  LDLK +
Sbjct: 642 AQFDIIQNIYIPEPQDIENIFKYGYVSHANQRNMYKLDLKNM 683


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 197 MTVPLGN-GDTLYTPPPPSSGLILVNILNILSGYGF 231
           M  P  N G  L+ P PP +      ++   SGYGF
Sbjct: 39  MRDPRSNRGPVLFPPGPPPNNEDSSGVIVGASGYGF 74


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.136    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,586
Number of Sequences: 429
Number of extensions: 7583
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 4
length of query: 504
length of database: 140,377
effective HSP length: 61
effective length of query: 443
effective length of database: 114,208
effective search space: 50594144
effective search space used: 50594144
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)