BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005299-TA|BGIBMGA005299-PA|undefined
(68 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 20 2.6
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 20 2.6
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 20 2.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 20 2.6
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 20 2.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 20 2.6
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 20 2.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 20 2.6
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 20 2.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 20 2.6
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 19 4.6
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 19 4.6
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 19 4.6
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 19 4.6
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 19 6.1
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 19 6.1
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 19 6.1
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 19.8 bits (39), Expect = 2.6
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 4 AFFDEYDYYNFDHDKHIFTGHGGKQRTK 31
+F D+Y + FD D GG K
Sbjct: 129 SFIDQYGFDGFDLDWEYPCQRGGVDEDK 156
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 19.8 bits (39), Expect = 2.6
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 4 AFFDEYDYYNFDHDKHIFTGHGGKQRTK 31
+F D+Y + FD D GG K
Sbjct: 129 SFIDQYGFDGFDLDWEYPCQRGGVDEDK 156
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 19.8 bits (39), Expect = 2.6
Identities = 6/22 (27%), Positives = 16/22 (72%)
Query: 26 GKQRTKKEASEHTNHFDPSGHS 47
G+Q +++S T++++P+ +S
Sbjct: 15 GQQARDQQSSPGTDYYNPNANS 36
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 19.8 bits (39), Expect = 2.6
Identities = 6/22 (27%), Positives = 16/22 (72%)
Query: 26 GKQRTKKEASEHTNHFDPSGHS 47
G+Q +++S T++++P+ +S
Sbjct: 15 GQQARDQQSSPGTDYYNPNANS 36
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 19.8 bits (39), Expect = 2.6
Identities = 6/22 (27%), Positives = 16/22 (72%)
Query: 26 GKQRTKKEASEHTNHFDPSGHS 47
G+Q +++S T++++P+ +S
Sbjct: 15 GQQARDQQSSPGTDYYNPNANS 36
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 19.8 bits (39), Expect = 2.6
Identities = 6/22 (27%), Positives = 16/22 (72%)
Query: 26 GKQRTKKEASEHTNHFDPSGHS 47
G+Q +++S T++++P+ +S
Sbjct: 15 GQQARDQQSSPGTDYYNPNANS 36
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 19.8 bits (39), Expect = 2.6
Identities = 6/22 (27%), Positives = 16/22 (72%)
Query: 26 GKQRTKKEASEHTNHFDPSGHS 47
G+Q +++S T++++P+ +S
Sbjct: 15 GQQARDQQSSPGTDYYNPNANS 36
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 19.8 bits (39), Expect = 2.6
Identities = 6/22 (27%), Positives = 16/22 (72%)
Query: 26 GKQRTKKEASEHTNHFDPSGHS 47
G+Q +++S T++++P+ +S
Sbjct: 15 GQQARDQQSSPGTDYYNPNANS 36
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 19.8 bits (39), Expect = 2.6
Identities = 6/22 (27%), Positives = 16/22 (72%)
Query: 26 GKQRTKKEASEHTNHFDPSGHS 47
G+Q +++S T++++P+ +S
Sbjct: 15 GQQARDQQSSPGTDYYNPNANS 36
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 19.8 bits (39), Expect = 2.6
Identities = 6/22 (27%), Positives = 16/22 (72%)
Query: 26 GKQRTKKEASEHTNHFDPSGHS 47
G+Q +++S T++++P+ +S
Sbjct: 15 GQQARDQQSSPGTDYYNPNANS 36
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 19.0 bits (37), Expect = 4.6
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 36 EHTNHFDPSGHSRKIVTKLMNAE 58
E + FDP G +K +L+ E
Sbjct: 100 ELESKFDPQGEYKKKYDELLKKE 122
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 19.0 bits (37), Expect = 4.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 41 FDPSGHSRKIVTKLMNAE 58
FDP G ++ KL+ E
Sbjct: 105 FDPKGEYKQKYNKLLEKE 122
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 19.0 bits (37), Expect = 4.6
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 36 EHTNHFDPSGHSRKIVTKLMNAE 58
E + FDP G +K +L+ E
Sbjct: 100 ELESKFDPQGEYKKKYDELLKKE 122
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 19.0 bits (37), Expect = 4.6
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 27 KQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKKTSNTKH 68
+Q A+ + NH +GH ++N H + KH
Sbjct: 309 QQNNNNAATNNQNHHHHAGHHIHAQHHVVN-HHVAANGSLKH 349
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 18.6 bits (36), Expect = 6.1
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 5 FFDEYDYYNFDHDKHIFTGHGG 26
++ YD+Y +H + H G
Sbjct: 428 YYVSYDFYKMNHPVYHKDPHYG 449
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 18.6 bits (36), Expect = 6.1
Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 10 DYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 62
++ N++H + ++G GG+ + H H + + + NAE++ K
Sbjct: 384 EHPNYNHYGYHYSGDGGE--VAHLPNTHMGHEPGAAYYQNENMLQKNAEYSGK 434
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 18.6 bits (36), Expect = 6.1
Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 10 DYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 62
++ N++H + ++G GG+ + H H + + + NAE++ K
Sbjct: 332 EHPNYNHYGYHYSGDGGE--VAHLPNTHMGHEPGAAYYQNENMLQKNAEYSGK 382
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.313 0.128 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,451
Number of Sequences: 317
Number of extensions: 688
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of query: 68
length of database: 114,650
effective HSP length: 44
effective length of query: 24
effective length of database: 100,702
effective search space: 2416848
effective search space used: 2416848
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.8 bits)
S2: 35 (18.2 bits)
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