Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005299-TA|BGIBMGA005299-PA|undefined
(68 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 29 0.10
SPAC18G6.09c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 0.13
SPCPB16A4.05c |||urease accessory protein UREG |Schizosaccharomy... 27 0.23
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 0.70
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 0.93
SPBC29A3.15c |rsm23||mitochondrial ribosomal protein subunit S23... 23 3.8
SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27 |Schizo... 23 6.6
SPBC1773.04 |||flavonol reductase/cinnamoyl-CoA reductase family... 22 8.7
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 22 8.7
SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity fac... 22 8.7
SPBC25B2.03 |||zf-C3HC4 type zinc finger|Schizosaccharomyces pom... 22 8.7
SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces pomb... 22 8.7
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 22 8.7
SPAC1783.04c |hst4||Sir2 family histone deacetylase Hst4|Schizos... 22 8.7
>SPBP22H7.05c |||ATPase with bromodomain
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1201
Score = 28.7 bits (61), Expect = 0.10
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 13 NFDHDKHIFTGHGGKQRTKKEASEH--TNHFDPSGHSRKIVTKLMNAEHNKKTSNTKH 68
N + D + H K ++ S H +HFDPS + +K+V+ + K +S KH
Sbjct: 18 NEEDDDYYSNAHSEKS---EDHSNHIKVSHFDPSSYKQKLVSVRETQRNRKFSSLQKH 72
>SPAC18G6.09c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 312
Score = 28.3 bits (60), Expect = 0.13
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 21 FTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHN 60
++GH ++ NHF+ +GH +T +N+ +N
Sbjct: 242 YSGHNSPHTNYSASTPSFNHFNAAGHPTGNITPTLNSPNN 281
>SPCPB16A4.05c |||urease accessory protein UREG
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 286
Score = 27.5 bits (58), Expect = 0.23
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 8 EYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHS 47
+YD++N DH H H + EA+ GHS
Sbjct: 21 DYDHHNHDHHGHDHHSHDSSSNSSSEAA-RLQFIQEHGHS 59
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 0.70
Identities = 13/56 (23%), Positives = 25/56 (44%)
Query: 6 FDEYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNK 61
+ + DY K +++ K+ T+K++ +H + S K K + EH K
Sbjct: 693 YKDLDYVELMTGKKVYSRTERKKDTQKQSHDHGHSHSKSHDREKEKEKKKDREHRK 748
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 25.4 bits (53), Expect = 0.93
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 24 HGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKKTSNT 66
H Q T + T H PS +I+ +L E N T++T
Sbjct: 885 HSSAQNTLDDHVNTTTHESPSSAFTEILERLKAIEQNISTNHT 927
>SPBC29A3.15c |rsm23||mitochondrial ribosomal protein subunit
S23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 23.4 bits (48), Expect = 3.8
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 23 GHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKKTSNTK 67
G G ++ KK S T+ S RKI T+L+N K TK
Sbjct: 151 GFGALEKQKKSFSFFTS---ASLLHRKITTELVNVLQRSKDQGTK 192
>SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 413
Score = 22.6 bits (46), Expect = 6.6
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 21 FTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKKT 63
+T H K K+ ++ DPS R V KL+ + T
Sbjct: 347 YTWHLCKSPFKRSTGNTNDNDDPSWRFRLFVKKLLKNRDQRST 389
>SPBC1773.04 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 336
Score = 22.2 bits (45), Expect = 8.7
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 13 NFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNA 57
N+ D H+FT +T +EA E + +K+ + M+A
Sbjct: 136 NYFGDGHVFTEKDWNPKTLREAEESDDELLNYTVCKKLGERAMHA 180
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 22.2 bits (45), Expect = 8.7
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 26 GKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKKTSNTKH 68
G+QR S T + +PS + + + + + + K +T H
Sbjct: 390 GRQRNTSFFSNSTGNTNPSAFNGLLTSSRIPSYNGSKVRSTSH 432
>SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity factor
complex subunit, Fip1 homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 22.2 bits (45), Expect = 8.7
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 7 DEYDYYNFDHDKHIFTGHGGKQRTKKE 33
D DY+N+ D+ + + KQ T ++
Sbjct: 137 DISDYFNYGFDEFTWAAYCAKQTTLRD 163
>SPBC25B2.03 |||zf-C3HC4 type zinc finger|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 554
Score = 22.2 bits (45), Expect = 8.7
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 19 HIFTGHGGKQRTKKEASEH-TNHFDPSGHSRKIVTKLMNAEHNKKTSN 65
H T HGG +RT +H + + + I L++A+ N T++
Sbjct: 329 HDPTSHGGPRRTLSSRRQHYLANVEQLMLAEAIRQSLLDAQSNDSTNS 376
>SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 22.2 bits (45), Expect = 8.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Query: 35 SEHTNHFDPSGHSR 48
S H NH DPSG R
Sbjct: 129 SIHGNHDDPSGDGR 142
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 22.2 bits (45), Expect = 8.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 44 SGHSRKIVTKLMNAE 58
SGH RK+ K++N E
Sbjct: 42 SGHQRKLEIKIINIE 56
>SPAC1783.04c |hst4||Sir2 family histone deacetylase
Hst4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 22.2 bits (45), Expect = 8.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 46 HSRKIVTKLMNAEHNKKTSNTK 67
HS K +K ++E K TS+TK
Sbjct: 344 HSAKRTSKQKSSEQTKITSSTK 365
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.128 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,724
Number of Sequences: 5004
Number of extensions: 12958
Number of successful extensions: 26
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 14
length of query: 68
length of database: 2,362,478
effective HSP length: 48
effective length of query: 20
effective length of database: 2,122,286
effective search space: 42445720
effective search space used: 42445720
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)
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