Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005299-TA|BGIBMGA005299-PA|undefined
(68 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56655| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-12
SB_24582| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.001
SB_57023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.13
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 31 0.13
SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.69
SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.2
SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.6
SB_52316| Best HMM Match : Fun_ATP-synt_8 (HMM E-Value=8) 27 1.6
SB_11254| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.1
SB_2894| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.1
SB_35651| Best HMM Match : NUMOD3 (HMM E-Value=3.2) 27 2.8
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.8
SB_10578| Best HMM Match : NUMOD3 (HMM E-Value=3.2) 27 2.8
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 3.7
SB_34800| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 3.7
SB_15331| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 3.7
SB_41532| Best HMM Match : Extensin_2 (HMM E-Value=1.4) 26 4.9
SB_53753| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.5
SB_49303| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0037) 25 6.5
SB_40024| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0088) 25 6.5
SB_10198| Best HMM Match : MBT (HMM E-Value=0) 25 6.5
SB_29451| Best HMM Match : K_tetra (HMM E-Value=1.1) 25 6.5
SB_28749| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.5
SB_10781| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.5
SB_47038| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.5
SB_38612| Best HMM Match : TSP_1 (HMM E-Value=3.3e-11) 25 8.5
SB_15859| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.5
>SB_56655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 67.3 bits (157), Expect = 2e-12
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 3 EAFFDEYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 62
E +FDEYDYYNFD +++ G+ K R+K+EA +TN F P GH RK++ K N E N+
Sbjct: 2 EPYFDEYDYYNFD--RNVVEGNTRKGRSKREACLNTNRFCPGGHERKVLEKYRNTEKNRA 59
Query: 63 TSNTK 67
+K
Sbjct: 60 AKPSK 64
>SB_24582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 69
Score = 37.5 bits (83), Expect = 0.001
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 7 DEYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHS-RKIVTKLMNAEHNKKTSN 65
D+YD Y+FD H G K ++KKEAS++ N GHS RK + + E +K
Sbjct: 5 DKYDDYDFDERLH--EGGARKGKSKKEASQNKN-VSTQGHSERKAAEYIQHGEDKRKEEK 61
Query: 66 TK 67
K
Sbjct: 62 IK 63
>SB_57023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 31.1 bits (67), Expect = 0.13
Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 12 YNFDHDKHIFT-GHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKKTSNTKH 68
Y DHD + GH T + EH + GH T EH+ TS +H
Sbjct: 327 YGHDHDTNTLRYGHDHDTNTLRYEQEHDTNTSRYGHDHDTNTLRYGHEHDTNTSRYEH 384
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 31.1 bits (67), Expect = 0.13
Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 12 YNFDHDKHIFT-GHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKKTSNTKH 68
Y DHD + GH T + EH + GH T EH+ TS +H
Sbjct: 383 YGHDHDTNTLRYGHDHDTNTLRYEQEHDTNTSRYGHDHDTNTLRYGHEHDTNTSRYEH 440
>SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1360
Score = 28.7 bits (61), Expect = 0.69
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 27 KQRTKKEA--SEHTNHFDPSGHSRKIVTKLMNAEHNKKTSN 65
K R K+A S++ H++ H R +V+KL+ HN +N
Sbjct: 490 KDRMHKKAIKSKNQQHWEAFKHQRNLVSKLIKDSHNDYLNN 530
>SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 1 MSEAFFDEYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHN 60
++E F + Y+ Y +D T G+ E + ++ + P SRK TK+ +
Sbjct: 295 IAEDFRERYEAYGYDQHDFPDTSSSGE-----ETLDDSDEWLPGQQSRKTSTKVASGAKK 349
Query: 61 KKTSNTK 67
+KT K
Sbjct: 350 RKTDRGK 356
>SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 27.5 bits (58), Expect = 1.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 3 EAFFDEYDYYNFDHDKHI 20
+AF+ +DYY F HD ++
Sbjct: 512 KAFYGSFDYYQFPHDSNL 529
>SB_52316| Best HMM Match : Fun_ATP-synt_8 (HMM E-Value=8)
Length = 420
Score = 27.5 bits (58), Expect = 1.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 3 EAFFDEYDYYNFDHDKHI 20
+AF+ +DYY F HD ++
Sbjct: 70 KAFYGSFDYYQFPHDSNL 87
>SB_11254| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 9 YDYYNFDHDKHIFTGHGGKQR 29
YDY + D+D H + GKQR
Sbjct: 17 YDYVDLDNDSHDYETMNGKQR 37
>SB_2894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 9 YDYYNFDHDKHIFTGHGGKQR 29
YDY + D+D H + GKQR
Sbjct: 103 YDYVDLDNDSHDYETMNGKQR 123
>SB_35651| Best HMM Match : NUMOD3 (HMM E-Value=3.2)
Length = 228
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Query: 32 KEASEHTNHFDPSG-----HSRKIVTKLMNAEHNKKTSNT 66
K+ H +H DP G HS K K +EH+K N+
Sbjct: 145 KDQKSHNHHKDPRGHKDRHHSDKTKDKPSQSEHSKGVENS 184
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 27 KQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKKTSNTKH 68
K+ KKE +++ + F G ++ + K +H+KK + +H
Sbjct: 353 KEEFKKEETDYLDVFKKGGTTKDKIEKKDKKKHHKKHKDKEH 394
>SB_10578| Best HMM Match : NUMOD3 (HMM E-Value=3.2)
Length = 379
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Query: 32 KEASEHTNHFDPSG-----HSRKIVTKLMNAEHNKKTSNT 66
K+ H +H DP G HS K K +EH+K N+
Sbjct: 86 KDQKSHNHHKDPRGHKDRHHSDKTKDKPSQSEHSKGVENS 125
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 24 HGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKKTSNT 66
H G+ + + GH+R+ VT+L A H +++SNT
Sbjct: 1112 HTGRSSNTTRSHTRRSSNTTRGHTRRQVTQL--ASHTRRSSNT 1152
>SB_34800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 17 DKHIFTGHGGKQRTKKEASEHTNHF--DPSGHSRKIVTKLMNAEHN 60
+ HI HGG+ TK++ H +P +++V + + AE +
Sbjct: 15 ETHITKHHGGEPETKEKRLVREKHHGGEPETKEKRLVREALKAERS 60
>SB_15331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 22 TGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKKTSNT 66
+G GK+ K E N +P +KI T+ + NK+ S +
Sbjct: 18 SGSSGKEMRKISTEEKPNQSEPPKKVKKIKTEKVEKTTNKQQSKS 62
>SB_41532| Best HMM Match : Extensin_2 (HMM E-Value=1.4)
Length = 1633
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 15 DHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKKTSNTKH 68
++ + I GG K + + T F P+ SRK KL +++ ++ H
Sbjct: 1294 ENSQTITRERGGDDNCKSSSLQRTEDFSPAQFSRKSPRKLTSSKGSQLLLRPSH 1347
>SB_53753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 27 KQRTKKEA--SEHTNHFDPSGHSRKIVTKLMNAEHNKKTSN 65
K R K+A S++ H++ R +V+KL+ HN +N
Sbjct: 4 KDRMHKKAIKSKNQQHWEAFKRQRNLVSKLIKDSHNDYLNN 44
>SB_49303| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0037)
Length = 722
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 27 KQRTKKEA--SEHTNHFDPSGHSRKIVTKLMNAEHNKKTSN 65
K R K+A S++ H++ R +V+KL+ HN +N
Sbjct: 666 KDRMHKKAIKSKNQQHWEAFKRQRNLVSKLIKDSHNDYLNN 706
>SB_40024| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0088)
Length = 321
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 27 KQRTKKEA--SEHTNHFDPSGHSRKIVTKLMNAEHNKKTSN 65
K R K+A S++ H++ R +V+KL+ HN +N
Sbjct: 265 KDRMHKKAIKSKNQQHWEAFKRQRNLVSKLIKDSHNDYLNN 305
>SB_10198| Best HMM Match : MBT (HMM E-Value=0)
Length = 753
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 40 HFDPSGHSRKIVTKLMNAEHNKKT 63
H S HS K V K++ AE KKT
Sbjct: 570 HIVVSSHSSKKVLKMLAAEKEKKT 593
>SB_29451| Best HMM Match : K_tetra (HMM E-Value=1.1)
Length = 607
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 8 EYDYYNFDHD--KHIFT-GHGGKQRTKKEASEHTNH 40
E D+Y D H+F GG +RTKK H ++
Sbjct: 523 EKDHYKSDEGWCPHVFVHALGGTERTKKNPEHHVDY 558
>SB_28749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 27 KQRTKKEA--SEHTNHFDPSGHSRKIVTKLMNAEHNKKTSN 65
K R K+A S++ H++ R +V+KL+ HN +N
Sbjct: 4 KDRMHKKAIKSKNQQHWEAFKRQRNLVSKLIKDSHNDYLNN 44
>SB_10781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 27 KQRTKKEA--SEHTNHFDPSGHSRKIVTKLMNAEHNKKTSN 65
K R K+A S++ H++ R +V+KL+ HN +N
Sbjct: 4 KDRMHKKAIKSKNQQHWEAFKRQRNLVSKLIKDSHNDYLNN 44
>SB_47038| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 876
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 28 QRTKKEASEHTNHF-DPSGHSRKIVTKLMNAEHNKKTSNTKH 68
+R E +EH N+ GHSR+ N + K +N H
Sbjct: 186 KRIADERAEHKNNLASKMGHSRRTADLSYNLINKVKAANNAH 227
>SB_38612| Best HMM Match : TSP_1 (HMM E-Value=3.3e-11)
Length = 900
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 15 DHDK-HIFTGHGGKQRTKKEASEHTNH 40
D DK HI T H + RT + TNH
Sbjct: 42 DIDKSHILTNHTSRYRTNHTSRYRTNH 68
>SB_15859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 15 DHDKHIFTGHGGKQRTKKEASEHTNHFDPSGH 46
DH+ H GHGG++ ++ + GH
Sbjct: 916 DHEGHKGNGHGGRKGKGRKGRKDKGRMGRKGH 947
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.128 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,648,284
Number of Sequences: 59808
Number of extensions: 96471
Number of successful extensions: 202
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 184
Number of HSP's gapped (non-prelim): 29
length of query: 68
length of database: 16,821,457
effective HSP length: 47
effective length of query: 21
effective length of database: 14,010,481
effective search space: 294220101
effective search space used: 294220101
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 52 (25.0 bits)
- SilkBase 1999-2023 -