GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005299-TA|BGIBMGA005299-PA|undefined
         (68 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    23   0.82 
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    23   0.82 
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    23   1.4  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    21   3.3  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    21   5.8  

>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
          negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.4 bits (48), Expect = 0.82
 Identities = 8/22 (36%), Positives = 15/22 (68%)

Query: 5  FFDEYDYYNFDHDKHIFTGHGG 26
          F D +D+++F+  +H+ T  GG
Sbjct: 64 FEDNFDFFDFEKWEHVNTLAGG 85


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
          negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.4 bits (48), Expect = 0.82
 Identities = 8/22 (36%), Positives = 15/22 (68%)

Query: 5  FFDEYDYYNFDHDKHIFTGHGG 26
          F D +D+++F+  +H+ T  GG
Sbjct: 64 FEDNFDFFDFEKWEHVNTLAGG 85


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)

Query: 7   DEYDYYNFDHDKHIFTGHGG 26
           D + YY   H    F G+GG
Sbjct: 122 DSFVYYRKQHRPEYFKGYGG 141


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 27  KQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 62
           KQ+    +S++  H D     +K     +++E NKK
Sbjct: 389 KQKADATSSKYLIHLDSVNREQKSDQDRLDSEINKK 424


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)

Query: 5    FFDEYDYYNFDHDKHIFT 22
            F DEYD +    ++H  T
Sbjct: 1059 FLDEYDVFTDQVNRHTIT 1076


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.128    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,651
Number of Sequences: 2123
Number of extensions: 2814
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 68
length of database: 516,269
effective HSP length: 46
effective length of query: 22
effective length of database: 418,611
effective search space:  9209442
effective search space used:  9209442
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)
S2: 40 (20.2 bits)