GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005291-TA|BGIBMGA005291-PA|undefined
         (88 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82192-1|CAI19711.1|  107|Homo sapiens protein ( Human DNA seque...    61   6e-10
CR456453-1|CAG30339.1|  107|Homo sapiens dJ186O1.1 protein.            61   6e-10
AL449243-1|CAC15000.1|  107|Homo sapiens hypothetical protein pr...    61   6e-10
AL021878-1|CAI19952.1|  107|Homo sapiens protein ( Human DNA seq...    61   6e-10
BC024237-1|AAH24237.1|  107|Homo sapiens chromosome 22 open read...    58   3e-09
BC080639-1|AAH80639.1|  637|Homo sapiens ESPNL protein protein.        27   9.2  
BC042051-1|AAH42051.1|  705|Homo sapiens ESPNL protein protein.        27   9.2  
AK124612-1|BAC85900.1|  722|Homo sapiens protein ( Homo sapiens ...    27   9.2  
AK124559-1|BAC85884.1| 1005|Homo sapiens protein ( Homo sapiens ...    27   9.2  

>Z82192-1|CAI19711.1|  107|Homo sapiens protein ( Human DNA sequence
           from clone RP1-186O1 on chromosome 22. ).
          Length = 107

 Score = 60.9 bits (141), Expect = 6e-10
 Identities = 29/59 (49%), Positives = 39/59 (66%)

Query: 22  IIHLRTATTTPTGAILPEPQKQPFGLLCVVFAVVPGLLIGAAISKNIANFLEENELFVP 80
           ++  R+   T +GAILP+P K  FGLL V   V+P L +G  ISKN A  LEE+++FVP
Sbjct: 42  LVPSRSVIVTRSGAILPKPVKMSFGLLRVFSIVIPFLYVGTLISKNFAALLEEHDIFVP 100


>CR456453-1|CAG30339.1|  107|Homo sapiens dJ186O1.1 protein.
          Length = 107

 Score = 60.9 bits (141), Expect = 6e-10
 Identities = 29/59 (49%), Positives = 39/59 (66%)

Query: 22  IIHLRTATTTPTGAILPEPQKQPFGLLCVVFAVVPGLLIGAAISKNIANFLEENELFVP 80
           ++  R+   T +GAILP+P K  FGLL V   V+P L +G  ISKN A  LEE+++FVP
Sbjct: 42  LVPSRSVIVTRSGAILPKPVKMSFGLLRVFSIVIPFLYVGTLISKNFAALLEEHDIFVP 100


>AL449243-1|CAC15000.1|  107|Homo sapiens hypothetical protein
           protein.
          Length = 107

 Score = 60.9 bits (141), Expect = 6e-10
 Identities = 29/59 (49%), Positives = 39/59 (66%)

Query: 22  IIHLRTATTTPTGAILPEPQKQPFGLLCVVFAVVPGLLIGAAISKNIANFLEENELFVP 80
           ++  R+   T +GAILP+P K  FGLL V   V+P L +G  ISKN A  LEE+++FVP
Sbjct: 42  LVPSRSVIVTRSGAILPKPVKMSFGLLRVFSIVIPFLYVGTLISKNFAALLEEHDIFVP 100


>AL021878-1|CAI19952.1|  107|Homo sapiens protein ( Human DNA
           sequence from clone RP1-257I20 on chromosome
           22q13.1-13.2.2.  ).
          Length = 107

 Score = 60.9 bits (141), Expect = 6e-10
 Identities = 29/59 (49%), Positives = 39/59 (66%)

Query: 22  IIHLRTATTTPTGAILPEPQKQPFGLLCVVFAVVPGLLIGAAISKNIANFLEENELFVP 80
           ++  R+   T +GAILP+P K  FGLL V   V+P L +G  ISKN A  LEE+++FVP
Sbjct: 42  LVPSRSVIVTRSGAILPKPVKMSFGLLRVFSIVIPFLYVGTLISKNFAALLEEHDIFVP 100


>BC024237-1|AAH24237.1|  107|Homo sapiens chromosome 22 open reading
           frame 32 protein.
          Length = 107

 Score = 58.4 bits (135), Expect = 3e-09
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 31  TPTGAILPEPQKQPFGLLCVVFAVVPGLLIGAAISKNIANFLEENELFVP 80
           T +GAILP+P K  FGLL V   V+P L +G  ISKN A  LEE+++FVP
Sbjct: 51  TRSGAILPKPVKMSFGLLRVFSIVIPFLYVGTLISKNFAALLEEHDIFVP 100


>BC080639-1|AAH80639.1|  637|Homo sapiens ESPNL protein protein.
          Length = 637

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 6   LTRLVAQSKTLTKHEPIIHLRTATTTPTGAILPE 39
           +T L+   K +  H P   LR  +  P GA+ PE
Sbjct: 436 ITHLLGNWKAIMAHVPARQLRRLSRQPRGALSPE 469


>BC042051-1|AAH42051.1|  705|Homo sapiens ESPNL protein protein.
          Length = 705

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 6   LTRLVAQSKTLTKHEPIIHLRTATTTPTGAILPE 39
           +T L+   K +  H P   LR  +  P GA+ PE
Sbjct: 504 ITHLLGNWKAIMAHVPARQLRRLSRQPRGALSPE 537


>AK124612-1|BAC85900.1|  722|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42621 fis, clone BRACE3015262. ).
          Length = 722

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 6   LTRLVAQSKTLTKHEPIIHLRTATTTPTGAILPE 39
           +T L+   K +  H P   LR  +  P GA+ PE
Sbjct: 521 ITHLLGNWKAIMAHVPARQLRRLSRRPRGALSPE 554


>AK124559-1|BAC85884.1| 1005|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42568 fis, clone BRACE3007625, moderately
           similar to Rattus norvegicus espin (Espn). ).
          Length = 1005

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 6   LTRLVAQSKTLTKHEPIIHLRTATTTPTGAILPE 39
           +T L+   K +  H P   LR  +  P GA+ PE
Sbjct: 804 ITHLLGNWKAIMAHVPARQLRRLSRQPRGALSPE 837


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.323    0.138    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,045,666
Number of Sequences: 224733
Number of extensions: 464357
Number of successful extensions: 887
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 878
Number of HSP's gapped (non-prelim): 9
length of query: 88
length of database: 73,234,838
effective HSP length: 66
effective length of query: 22
effective length of database: 58,402,460
effective search space: 1284854120
effective search space used: 1284854120
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 57 (27.1 bits)