Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005285-TA|BGIBMGA005285-PA|IPR013026|Tetratricopeptide
region, IPR001179|Peptidylprolyl isomerase, FKBP-type,
IPR001440|Tetratricopeptide TPR_1
(324 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 63 4e-11
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 40 5e-04
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 40 5e-04
SPAC2F3.02 |||ER protein translocation subcomplex subunit|Schizo... 38 0.002
SPCC63.05 |||TAP42 family protein |Schizosaccharomyces pombe|chr... 36 0.008
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 35 0.014
SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 30 0.39
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 30 0.51
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 29 0.68
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 29 1.2
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 29 1.2
SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component Sec9|Sc... 28 2.1
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 28 2.1
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 27 2.7
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 27 3.6
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 4.8
SPCC1020.09 |||WD repeat protein, human WDR79 family|Schizosacch... 26 6.3
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 26 6.3
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 26 6.3
SPBC23G7.11 |||DNA-3-methyladenine glycosidase Mag2 |Schizosacch... 26 8.3
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 26 8.3
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 63.3 bits (147), Expect = 4e-11
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 16/147 (10%)
Query: 167 DLIPTLKEKGNSLYGEKKYDEAEEAYNEALAICEQLMIRERKGDEEWININELKIPILLN 226
++ +E GN + K+Y +AEE Y +ALA ++ GD++ ++I N
Sbjct: 62 EVAQNFREHGNECFASKRYKDAEEFYTKALA--------QKCGDKD------IEIACYSN 107
Query: 227 YAQCKLLKGEYYAVIEHCNTVLEFDKDNEKALYRRAKAHIGAWNPDRAEEDLRRLKVLNQ 286
A C LL Y V+ C VL+ D + KA YR AKA + D A+E +R +++
Sbjct: 108 RAACNLLFENYRQVLNDCAQVLQRDSTHAKAYYRSAKALVALKRYDEAKECIRLCSLVHP 167
Query: 287 SMPS--TIDKELENIKKMRKEKENQDK 311
+ P+ + KEL+ +++E++ K
Sbjct: 168 NDPAILALSKELQKKSDDFEKRESEKK 194
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 39.9 bits (89), Expect = 5e-04
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 233 LKGEYYAV-IEHCNTVLEFDKDNEKALYRRAKAHIGAWNPDRAEEDLRRLKVLNQSMPST 291
LK E Y + I + +E D + KA +RRA AHI + P A D R+ L S P+
Sbjct: 50 LKSEDYGLAINDASKAIECDPEYAKAYFRRATAHIAIFQPKEAVGDFRKALALAPSDPAA 109
Query: 292 IDK--ELENIKKMRKEKE 307
K E E + K + +E
Sbjct: 110 RKKLRECEQLVKRIRFQE 127
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 39.9 bits (89), Expect = 5e-04
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 154 EREMWQLSIQERIDLIPTLKEKGNSLYGEKKYDEAEEAYNEALAICEQLMIRERKGDEEW 213
E + ++ +ER L LK GN YG+K+Y A + Y +A+ C I
Sbjct: 136 EESVKSMTKEERAKLAAELKTLGNKAYGQKEYANAIDYYTQAIT-CSHDPI--------- 185
Query: 214 ININELKIPILLNYAQCKLLKGEYYAVIEHCNTVLEFDKDNEKALYRRAKAHIGAWNPDR 273
N A C G++ VI+ + L D KAL RR+ A+ D
Sbjct: 186 ---------FFSNRAACYAAIGDFEQVIKDTSEALSLDSSYVKALNRRSAAYEQLGKLDE 236
Query: 274 AEEDLRRLKVL----NQSMPSTIDKELENIKKMR 303
A D + N+SM +T+++ L+ + + +
Sbjct: 237 ALMDSTVSCIFDGFANESMTATVERLLKKVAEKK 270
>SPAC2F3.02 |||ER protein translocation subcomplex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 37.9 bits (84), Expect = 0.002
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 172 LKEKGNSLYGEKKYDEAEEAYNEALAICEQLMIRERKGDEEWININELKIPILLNYAQCK 231
+K+ N + KKY+EA++ Y AL QL + + + E + +L N A +
Sbjct: 65 MKQTANEAFKRKKYEEAKKLYGLAL----QLALNRCTWEPSILTREEASV-MLCNRAAAE 119
Query: 232 LLKGEYYAVIEHCNTVLEFDKDNEKALYRRAKA 264
+ ++ + N L+ + K YR+AKA
Sbjct: 120 IALSQFPEALADANAALKIRNNYGKCYYRKAKA 152
>SPCC63.05 |||TAP42 family protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 323
Score = 35.9 bits (79), Expect = 0.008
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 17/149 (11%)
Query: 171 TLKEKGNSLYGEKKYDEAEEAYNEALAICEQLMIRERKGDEEWININELKIPILLNY--A 228
T K K +S EK E E Y + L + QL I + + I +EL+ ++++Y A
Sbjct: 13 TEKLKDSSSTDEKTRSEIVEGYEKCLKLVLQLRIFSSNEEVDEIKTSELRY-LMIDYELA 71
Query: 229 QC--KLLKGEYYAVIE----HCNTVLEFDKDNEKALYRRAKAHIGAWNPDRAEEDLRRLK 282
+C + KG+ ++ H T L D + K + E D R LK
Sbjct: 72 KCVEQWTKGDRLKAVQYAKTHYETFLSICDDYGLKPMQDEKP--------KTEADTRTLK 123
Query: 283 VLNQSMPSTIDKELENIKKMRKEKENQDK 311
+ M ++KEL+ + K + E Q++
Sbjct: 124 IARYRMRQNLEKELKALSKDSETNEEQER 152
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 35.1 bits (77), Expect = 0.014
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 161 SIQERIDLIPTLKEKGNSLYGEKKYDEAEEAYNEAL 196
S QE +L K GN+ Y EKKY EA +AY EA+
Sbjct: 15 SQQEPAELAEKQKAIGNAFYKEKKYAEAIKAYTEAI 50
Score = 31.1 bits (67), Expect = 0.22
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 15/147 (10%)
Query: 164 ERIDLIPTLKEKGNSLYGEKKYDEAEEAYNEALAICEQLMIRERKGDEEWININELKIPI 223
+++ + K +GN L+ + Y +A E Y+EAL I D + E +
Sbjct: 218 KQVRKLENTKNQGNDLFRQGNYQDAYEKYSEALQI-----------DPD---NKETVAKL 263
Query: 224 LLNYAQCKLLKGEYYAVIEHCNTVLEFDKDNEKALYRRAKAHIGAWNPDRAEEDLRRLKV 283
+N A L + + L D K L RAKAH + A D++
Sbjct: 264 YMNRATVLLRLKRPEEALSDSDNALAIDSSYLKGLKVRAKAHEALEKWEEAVRDVQSAIE 323
Query: 284 LNQSMPSTIDKELENIKKMRKEKENQD 310
L+ S + + +EL ++ K+ + +D
Sbjct: 324 LDAS-DANLRQELRRLQLELKKSKRKD 349
>SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 30.3 bits (65), Expect = 0.39
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 242 EHCNTVLEFDKDNEKALYRRAKAHIGAWNPDRA-EEDLRRLKVLNQSMPSTIDKELENIK 300
EH +LE DNEK+ K++ + PD E+DL+ K L + + +++ LE I+
Sbjct: 64 EHGGVLLE---DNEKS--NDNKSNTSSKIPDWVLEQDLKIQKDLVKETHARLEQRLEEIR 118
Query: 301 KMRKEKENQ 309
K + ++NQ
Sbjct: 119 KRNQSRKNQ 127
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 29.9 bits (64), Expect = 0.51
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 169 IPTLKEKGNSLYGEKKYDEAEEAYNEALAICEQL 202
I L +GN Y +K Y+EA + Y +AL E +
Sbjct: 32 IEQLVTQGNMAYAQKNYEEAVDKYGQALMQSESI 65
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 29.5 bits (63), Expect = 0.68
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 248 LEFDKDNEKALYRRAKAHIGAWNPDRAEEDLRRLKVLNQSMPSTIDKELENIKKMRKEKE 307
L+F N HI P RA ED ++ ++ N S+ S +DK I + K+ +
Sbjct: 137 LKFGPVNSVQFNDAYSTHISPKLPGRAYEDCQKFEIDNPSL-SPVDKHGAIILRTYKKNK 195
Query: 308 NQDKDALKSMF 318
D LKS +
Sbjct: 196 KLLPDYLKSFY 206
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 241 IEHCNTVLEFDKDNEKALYRRAKAHIGAWNP-DRAEEDLRRLKVLNQSMPSTIDKELENI 299
I+H N+VL D D + R + + D+ ++ L K++N S+P TID+ + N
Sbjct: 119 IKHINSVLAGDPD----VGSRVPINTETFEFFDQCKDGLILSKLINDSVPDTIDERVLNK 174
Query: 300 KKMRKEKEN 308
++ K +N
Sbjct: 175 QRNNKPLDN 183
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 28.7 bits (61), Expect = 1.2
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 146 KVEHSDE--YEREMWQLSIQERIDLIPTLKEKGNS-------LYGEKKYDEAEEAYNEAL 196
+ EH E YERE + +QER +K + Y + DE ++AY EA
Sbjct: 704 QAEHDREIFYEREKQRKEVQERKHEQAIKDKKAFAQFASYIHAYKQNIDDERDKAYQEAY 763
Query: 197 AICEQLMIRERKGDEEWININELKIPILLNYAQCKLLKGEYYAVIEHCNTVL-EFDKDNE 255
A + ++ ER+ + I E K+ + A+ + + A E N L E ++ +
Sbjct: 764 AKAKNVIDAERERQRK--EIFEQKLAEAIREAEEEAAR----AAEEEANRELHEQEEAQK 817
Query: 256 KALYRRAKAHIGAWNPDRAE--EDLRRLKVLNQSMPSTIDKEL 296
+A+ R +A A ++ E E L R + + Q I ++L
Sbjct: 818 RAIEERTRAAREAKEREQREMAEKLERQRRIQQERDEEISRKL 860
>SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component
Sec9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 419
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 246 TVLEFDKDNEKALYRRAKAHIGAWNPDRAEEDLRRLKVLNQSM 288
T+ + EK + I + RAEE R LK LN+SM
Sbjct: 230 TLANLGEQTEKIATAEKELDISKIHAKRAEEQARELKTLNRSM 272
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 27.9 bits (59), Expect = 2.1
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 245 NTVLEFDKDNEKALYRRAKAHIGAWNPDRAEEDLRRLKVLNQSMPSTIDKELENIKKMRK 304
N++ + K N K+ Y+R+ + ++ DR + +R + KE EN ++++K
Sbjct: 256 NSMRDDKKRNHKSSYKRSLSPSTRYHQDRPD---KRHGTYSLEEIDKQRKEFENRQRLQK 312
Query: 305 EKENQD--KDALKSMFLKNGT 323
EKE Q + ALK +N T
Sbjct: 313 EKEFQKSREAALKIHASRNTT 333
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 27.5 bits (58), Expect = 2.7
Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 16/159 (10%)
Query: 143 ELLKVEHSDEYEREMWQLSIQERID--LIPTLKEKGNSLYGEKKYDEAEEAYNEALAICE 200
+LLK + +Y +W D + EK S+ E E EE L + E
Sbjct: 54 DLLKDTNMTDYVANLWTNLHGGHTDEDMANAFAEKRRSVLQE--LSELEEEVQGILGVLE 111
Query: 201 Q----LMIRERKGD-----EEWININELKIPILLNYAQCKLLKGEYYAVIEHCNTVLEFD 251
+R+ KG +E NI +I +L +AQ + G Y + F
Sbjct: 112 NPDLIAALRQDKGQNLQHLQEHYNITPERIAVLYKFAQFQYNCGNYGGASDLLYHFRAFS 171
Query: 252 KD---NEKALYRRAKAHIGAWNPDRAEEDLRRLKVLNQS 287
KD N A + + + I + D A E+L +L+ + S
Sbjct: 172 KDPELNASATWGKFASEILTVDWDGAMEELGKLREMVDS 210
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 172 LKEKGNSLYGEKKYDEAEEAYNEALAICEQLMIRERKGDEEWININELKIPILLNYAQCK 231
+K+ N L Y +A E + LA ++E EWI+ ++ ++NY +
Sbjct: 112 IKDAQNYLNKYASYFQAHEPTLQKLAKFGSFKLKETPNVHEWIDQRQVHFTSMINYRTSQ 171
Query: 232 L 232
L
Sbjct: 172 L 172
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.6 bits (56), Expect = 4.8
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 128 LDEIITKPCDLEFIIELLKVEHSD-EYEREMWQLSIQERIDLIPTLKEKGNSLYGEKKYD 186
LDE ++K LE IE LK + S+ E ER L+ ER L+ LK G ++ +
Sbjct: 978 LDETLSKSSKLEADIEHLKNKVSEVEVERNA-LLASNER--LMDDLKNNGENIASLQTEI 1034
Query: 187 EAEEAYNEAL 196
E + A N+ L
Sbjct: 1035 EKKRAENDDL 1044
>SPCC1020.09 |||WD repeat protein, human WDR79
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 399
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 37 GQERVLIDDSRKIGKKEPMVLVLGHKFKLEVWETVVK 73
G + L + + G KEP++ + H +K+ +WE +K
Sbjct: 173 GDKNCLHHFNIRTGCKEPVMTTVTHGYKVPLWEFSLK 209
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 172 LKEKGNSLYGEKKYDEAEEAYNEALAICEQ 201
LK KGN+ + +K Y A + + +A+ + E+
Sbjct: 5 LKAKGNAAFSKKDYKTAIDYFTQAIGLDER 34
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 162 IQERIDLIPTLKEKGNSLYGEKKYDEA-EEAYNEALAICEQLMIRERKGDE 211
+QER+D++ L ++ LY K+DE +EA + EQ + R+ D+
Sbjct: 223 MQERLDILTNLLDELTLLYETDKFDETMKEAILSFEDLKEQEIRRKVSSDD 273
>SPBC23G7.11 |||DNA-3-methyladenine glycosidase Mag2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 213
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 132 ITKPCDLEFIIELLKVEHSDEYEREMWQLSIQERIDLIP----TLKEKGNSLYGEKKYDE 187
I K + E + L K++ + EM+ + R+D++P TLK + +G +
Sbjct: 121 IEKMSEEELMESLSKIKGVKRWTIEMYSIFTLGRLDIMPADDSTLKNEAKEFFGLSSKPQ 180
Query: 188 AEE 190
EE
Sbjct: 181 TEE 183
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 25.8 bits (54), Expect = 8.3
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 161 SIQERIDLIPTLKEKGNSLYGEKKYDEAEEAYNEALAICEQLMIRERKGDEEWININELK 220
++ E I I T E N+ E+++ + ++ +A + E L+ +RK +E +++ E +
Sbjct: 306 TVNENITRISTSIELKNTAL-EEEHGDLQQIRGKAKEL-ETLLRGKRKRLDEVLSVYEKR 363
Query: 221 IPILLNYAQCKLLKGEYYAVIEHCNTVLEFDKDNEKALYRRAKAHIGAWNPDRAEEDLRR 280
+ + K K + +I T L + +E R+ N +AE++ R
Sbjct: 364 KDE--HQSISKDFKSQE-ELISSLTTGLSTTEGHETGYSRKLHEARDTLNDFKAEKETNR 420
Query: 281 LKV--LNQSMPSTIDKELENIKKMRKEKENQDKDALKS 316
LK+ LN+ + T K+ E K R ++ N++ D L++
Sbjct: 421 LKLEGLNKQISLTKPKKAEATK--RCDQLNREIDILQN 456
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.134 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,560,755
Number of Sequences: 5004
Number of extensions: 68160
Number of successful extensions: 259
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 237
Number of HSP's gapped (non-prelim): 27
length of query: 324
length of database: 2,362,478
effective HSP length: 73
effective length of query: 251
effective length of database: 1,997,186
effective search space: 501293686
effective search space used: 501293686
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 54 (25.8 bits)
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