GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005283-TA|BGIBMGA005283-PA|undefined
         (126 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    27   0.084
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   1.8  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   3.2  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   4.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    20   9.7  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 26.6 bits (56), Expect = 0.084
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 53  EYHFKNLIIHLENFPFHIPFTW 74
           +YH    ++++E FP+  PF W
Sbjct: 204 KYHRSGGLMNVERFPYQPPFAW 225


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 66  FPFHIPFTWSSIIVRT 81
           FPFH+ F    IIV+T
Sbjct: 215 FPFHLMFNRDLIIVQT 230


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 66  FPFHIPFTWSSIIVRT 81
           FPFH+ F    IIV+T
Sbjct: 215 FPFHLMFNRDLIIVQT 230


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 12/52 (23%), Positives = 28/52 (53%)

Query: 54  YHFKNLIIHLENFPFHIPFTWSSIIVRTRVDVQGFLMPSNEEVFRWKTYVSV 105
           + F NL+  L+ FP   PF    ++  T +  + + + S+ +V + + +++V
Sbjct: 865 WKFPNLVEVLDEFPSVRPFAPLLLLHLTPLQPRFYSISSSPDVHQGQIHLTV 916


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query: 11  HYQPTPIQGDYKLCDFLYKE 30
           +Y P  +  DY + D LY E
Sbjct: 418 NYNPETVSTDYDMSDRLYFE 437


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 5/17 (29%), Positives = 11/17 (64%)

Query: 7   LSSGHYQPTPIQGDYKL 23
           ++  ++ P P+ GDY +
Sbjct: 230 ITHSYFMPDPLAGDYNI 246


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)

Query: 57  KNLIIHLENFP 67
           KNL+I L+ FP
Sbjct: 522 KNLMIELDKFP 532


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.135    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,858
Number of Sequences: 429
Number of extensions: 2352
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 126
length of database: 140,377
effective HSP length: 51
effective length of query: 75
effective length of database: 118,498
effective search space:  8887350
effective search space used:  8887350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.9 bits)
S2: 39 (19.8 bits)