GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005280-TA|BGIBMGA005280-PA|IPR008997|Ricin B-related
lectin, IPR001173|Glycosyl transferase, family 2
         (387 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              24   1.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   3.3  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 313 VRLAEVWLDDYSKYFYQRIGNKKGNFGDVSQRKELRKKLNCK 354
           ++ AE+WL     Y   +I    G   D+ + +E+  K   K
Sbjct: 1   MKAAEIWLVSLYWYLILQIALVYGEISDIDEFREMTSKYRKK 42


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 181 VVSPVVDSIHEDTFEYVAQDINDLRIGGFNWNLRFVW 217
           VV  + D++    F  ++ +  DLR+G  ++   F W
Sbjct: 261 VVPEIEDNLETSLFRPLSSEATDLRMGVASFCKAFPW 297


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.141    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,239
Number of Sequences: 429
Number of extensions: 5668
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 2
length of query: 387
length of database: 140,377
effective HSP length: 59
effective length of query: 328
effective length of database: 115,066
effective search space: 37741648
effective search space used: 37741648
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 45 (22.2 bits)