GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005278-TA|BGIBMGA005278-PA|IPR000618|Insect cuticle
protein
         (145 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    66   1e-13
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   3.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   6.9  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 66.1 bits (154), Expect = 1e-13
 Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 47  EADAQIVSQDADV-FPDKYQYQYQTSNGISGQEQGALVNEGREDASIAVQGSSGYTAPDG 105
           + DA I SQ  +V F   Y   ++TSNGIS QE G       E   ++ QGS  YTAPDG
Sbjct: 24  DKDAVITSQQLEVNFDGNYINNFETSNGISHQESGQPKQVDNETPVVS-QGSDSYTAPDG 82

Query: 106 TPIQITYIADANGYQ 120
             + ITY+AD NG+Q
Sbjct: 83  QQVSITYVADENGFQ 97


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 4/46 (8%)

Query: 59  VFPDKYQYQ----YQTSNGISGQEQGALVNEGREDASIAVQGSSGY 100
           +FP +  Y     Y  SNG +      L  + +E+     + +S Y
Sbjct: 131 IFPQENNYNDNYFYSKSNGSNSSNSDVLFKQNKEEEQTINRKNSDY 176


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
          protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query: 52 IVSQDADVFPDKYQYQYQTSNG 73
          + +Q A+ + D YQ+ +  S+G
Sbjct: 1  MANQTANYYGDVYQWNHTVSSG 22


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.310    0.128    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,779
Number of Sequences: 429
Number of extensions: 1414
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 145
length of database: 140,377
effective HSP length: 52
effective length of query: 93
effective length of database: 118,069
effective search space: 10980417
effective search space used: 10980417
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.9 bits)
S2: 40 (20.2 bits)