Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005275-TA|BGIBMGA005275-PA|IPR011046|WD40-like
(616 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC094885-1|AAH94885.1| 1202|Homo sapiens USP52 protein protein. 363 e-100
BC024043-1|AAH24043.1| 1198|Homo sapiens ubiquitin specific pept... 363 e-100
AB107585-1|BAD02263.1| 1198|Homo sapiens PABP1-DEPENDENT POLY(A)... 363 e-100
AB014610-1|BAA31685.2| 1206|Homo sapiens KIAA0710 protein protein. 363 e-100
BC132862-1|AAI32863.1| 1316|Homo sapiens ubiquitin specific pept... 35 0.98
BC060846-1|AAH60846.2| 1202|Homo sapiens USP42 protein protein. 35 0.98
BC010080-1|AAH10080.1| 305|Homo sapiens WD repeat domain 61 pro... 35 0.98
AY618868-1|AAT67238.1| 1324|Homo sapiens ubiquitin specific prot... 35 0.98
AK024754-1|BAB14986.1| 305|Homo sapiens protein ( Homo sapiens ... 35 0.98
AK022759-1|BAB14232.1| 1198|Homo sapiens protein ( Homo sapiens ... 35 0.98
AJ601395-1|CAE53097.1| 1325|Homo sapiens ubiquitin-specific prot... 35 0.98
AF309553-1|AAG31639.1| 305|Homo sapiens meiotic recombination p... 35 0.98
AF100786-1|AAP97225.1| 305|Homo sapiens G protein beta subunit-... 35 0.98
AF127799-1|AAP97249.1| 305|Homo sapiens G protein beta subunit-... 32 5.2
BC037574-1|AAH37574.1| 366|Homo sapiens ubiquitin specific pept... 32 6.9
AK024318-1|BAB14881.1| 366|Homo sapiens protein ( Homo sapiens ... 32 6.9
AK022614-1|BAB14133.1| 366|Homo sapiens protein ( Homo sapiens ... 32 6.9
BC026072-1|AAH26072.1| 370|Homo sapiens ubiquitin specific pept... 31 9.1
AL355473-1|CAI16331.1| 370|Homo sapiens ubiquitin specific prot... 31 9.1
AL158062-1|CAH70555.1| 370|Homo sapiens ubiquitin specific prot... 31 9.1
AF022789-1|AAC23551.1| 355|Homo sapiens ubiquitin hydrolyzing e... 31 9.1
>BC094885-1|AAH94885.1| 1202|Homo sapiens USP52 protein protein.
Length = 1202
Score = 363 bits (894), Expect = e-100
Identities = 211/538 (39%), Positives = 307/538 (57%), Gaps = 25/538 (4%)
Query: 1 MQKYTSFQVHDTDEVRDIITVEKCIYVLTKTTLRHQLRRGIPKHTHKSPNMTDMQCLYQV 60
+++Y+SFQV+ +D++R I ++E I LTK L++ R G+ + DM L
Sbjct: 105 LERYSSFQVNGSDDIRQIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSLLLT 164
Query: 61 NSTKLLMGGHQDKLIDLDLNKMVETI-IPIQEEGCAVLRSGGSSHVACGSANGIVALRDM 119
+S+ LL+GG Q+ ++++DLN + ET ++ G ++R + CG +G V+LRD+
Sbjct: 165 DSSTLLVGGLQNHILEIDLNTVQETQKYAVETPGVTIMRQT-NRFFFCGHTSGKVSLRDL 223
Query: 120 RAPTKAEHTFRAHTACLSDLDMQGDLLLTCGFTQAVGGVVAEPYIVVWDVRCLRGSNPGQ 179
R K EH F A + LSD D+ G+LL CGF+ + G+ + ++ V+D+R +R P Q
Sbjct: 224 RT-FKVEHEFDAFSGSLSDFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQ 282
Query: 180 GGWTIHTTSPPLLLHFLPAFSGRAVAASGDGHVSLLHVNAPEERQSIFKVETHSSQCNVM 239
+H P L F+P ++ R S G IF V
Sbjct: 283 ----VHVD--PAFLRFIPTYTSRLAIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTF 336
Query: 240 DVASTSQALAFGDQSGHLNLFSPTQNHEPVYNNFSRSTEFADP--VEGLPYVRFSDTRFQ 297
DV+++ QALAFGD G ++L+ T + EP +N +SR TEFA P V+ LP + +S
Sbjct: 337 DVSASKQALAFGDSEGCVHLW--TDSPEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLP 394
Query: 298 YSSVPLPQLASGGKWFNELPPEFFRKVYRKPKPVDPEVLKSMKMQGPIGYAPNPKTFKRN 357
S +P+P ++ P R+ PVD E+L++MK G IGYAPNP+T RN
Sbjct: 395 LSLIPVPLTTD--TLLSDWPAANSAPAPRRAPPVDAEILRTMKKVGFIGYAPNPRTRLRN 452
Query: 358 QMPY-LEESLEEM-SISKINGNKVIMQPIP------KHYQKLDIRYNKHGPNE-ELESFN 408
Q+PY L+ES E S S++ + V + P K Y+K+ I+Y+K G + + + +N
Sbjct: 453 QIPYRLKESDSEFDSFSQVTESPVGREEEPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYN 512
Query: 409 KTGQPGLEATLPNSYCNAMLQVLYYTPPVKATLLAHTCAKEFCLSCELGFLFRMLDTSGG 468
KT GLE +PN+YCN M+QVLY+ PV+ + H C KEFCL+CELGFLF MLD S G
Sbjct: 513 KTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLIQNHLCQKEFCLACELGFLFHMLDLSRG 572
Query: 469 TPCQATNFLRAFRTVPEAAALGLILPDR-APDIRVDLVALIQSWNRFILHQIHYEILE 525
PCQ NFLRAFRT+PEA+ALGLIL D + +L LIQ WNRFIL Q+H ++ E
Sbjct: 573 DPCQGNNFLRAFRTIPEASALGLILADSDEASGKGNLARLIQRWNRFILTQLHQDMQE 630
>BC024043-1|AAH24043.1| 1198|Homo sapiens ubiquitin specific
peptidase 52 protein.
Length = 1198
Score = 363 bits (894), Expect = e-100
Identities = 211/538 (39%), Positives = 307/538 (57%), Gaps = 25/538 (4%)
Query: 1 MQKYTSFQVHDTDEVRDIITVEKCIYVLTKTTLRHQLRRGIPKHTHKSPNMTDMQCLYQV 60
+++Y+SFQV+ +D++R I ++E I LTK L++ R G+ + DM L
Sbjct: 105 LERYSSFQVNGSDDIRQIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSLLLT 164
Query: 61 NSTKLLMGGHQDKLIDLDLNKMVETI-IPIQEEGCAVLRSGGSSHVACGSANGIVALRDM 119
+S+ LL+GG Q+ ++++DLN + ET ++ G ++R + CG +G V+LRD+
Sbjct: 165 DSSTLLVGGLQNHILEIDLNTVQETQKYAVETPGVTIMRQT-NRFFFCGHTSGKVSLRDL 223
Query: 120 RAPTKAEHTFRAHTACLSDLDMQGDLLLTCGFTQAVGGVVAEPYIVVWDVRCLRGSNPGQ 179
R K EH F A + LSD D+ G+LL CGF+ + G+ + ++ V+D+R +R P Q
Sbjct: 224 RT-FKVEHEFDAFSGSLSDFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQ 282
Query: 180 GGWTIHTTSPPLLLHFLPAFSGRAVAASGDGHVSLLHVNAPEERQSIFKVETHSSQCNVM 239
+H P L F+P ++ R S G IF V
Sbjct: 283 ----VHVD--PAFLRFIPTYTSRLAIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTF 336
Query: 240 DVASTSQALAFGDQSGHLNLFSPTQNHEPVYNNFSRSTEFADP--VEGLPYVRFSDTRFQ 297
DV+++ QALAFGD G ++L+ T + EP +N +SR TEFA P V+ LP + +S
Sbjct: 337 DVSASKQALAFGDSEGCVHLW--TDSPEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLP 394
Query: 298 YSSVPLPQLASGGKWFNELPPEFFRKVYRKPKPVDPEVLKSMKMQGPIGYAPNPKTFKRN 357
S +P+P ++ P R+ PVD E+L++MK G IGYAPNP+T RN
Sbjct: 395 LSLIPVPLTTD--TLLSDWPAANSAPAPRRAPPVDAEILRTMKKVGFIGYAPNPRTRLRN 452
Query: 358 QMPY-LEESLEEM-SISKINGNKVIMQPIP------KHYQKLDIRYNKHGPNE-ELESFN 408
Q+PY L+ES E S S++ + V + P K Y+K+ I+Y+K G + + + +N
Sbjct: 453 QIPYRLKESDSEFDSFSQVTESPVGREEEPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYN 512
Query: 409 KTGQPGLEATLPNSYCNAMLQVLYYTPPVKATLLAHTCAKEFCLSCELGFLFRMLDTSGG 468
KT GLE +PN+YCN M+QVLY+ PV+ + H C KEFCL+CELGFLF MLD S G
Sbjct: 513 KTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLIQNHLCQKEFCLACELGFLFHMLDLSRG 572
Query: 469 TPCQATNFLRAFRTVPEAAALGLILPDR-APDIRVDLVALIQSWNRFILHQIHYEILE 525
PCQ NFLRAFRT+PEA+ALGLIL D + +L LIQ WNRFIL Q+H ++ E
Sbjct: 573 DPCQGNNFLRAFRTIPEASALGLILADSDEASGKGNLARLIQRWNRFILTQLHQDMQE 630
>AB107585-1|BAD02263.1| 1198|Homo sapiens PABP1-DEPENDENT
POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN2 protein.
Length = 1198
Score = 363 bits (894), Expect = e-100
Identities = 211/538 (39%), Positives = 307/538 (57%), Gaps = 25/538 (4%)
Query: 1 MQKYTSFQVHDTDEVRDIITVEKCIYVLTKTTLRHQLRRGIPKHTHKSPNMTDMQCLYQV 60
+++Y+SFQV+ +D++R I ++E I LTK L++ R G+ + DM L
Sbjct: 105 LERYSSFQVNGSDDIRQIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSLLLT 164
Query: 61 NSTKLLMGGHQDKLIDLDLNKMVETI-IPIQEEGCAVLRSGGSSHVACGSANGIVALRDM 119
+S+ LL+GG Q+ ++++DLN + ET ++ G ++R + CG +G V+LRD+
Sbjct: 165 DSSTLLVGGLQNHILEIDLNTVQETQKYAVETPGVTIMRQT-NRFFFCGHTSGKVSLRDL 223
Query: 120 RAPTKAEHTFRAHTACLSDLDMQGDLLLTCGFTQAVGGVVAEPYIVVWDVRCLRGSNPGQ 179
R K EH F A + LSD D+ G+LL CGF+ + G+ + ++ V+D+R +R P Q
Sbjct: 224 RT-FKVEHEFDAFSGSLSDFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQ 282
Query: 180 GGWTIHTTSPPLLLHFLPAFSGRAVAASGDGHVSLLHVNAPEERQSIFKVETHSSQCNVM 239
+H P L F+P ++ R S G IF V
Sbjct: 283 ----VHVD--PAFLRFIPTYTSRLAIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTF 336
Query: 240 DVASTSQALAFGDQSGHLNLFSPTQNHEPVYNNFSRSTEFADP--VEGLPYVRFSDTRFQ 297
DV+++ QALAFGD G ++L+ T + EP +N +SR TEFA P V+ LP + +S
Sbjct: 337 DVSASKQALAFGDSEGCVHLW--TDSPEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLP 394
Query: 298 YSSVPLPQLASGGKWFNELPPEFFRKVYRKPKPVDPEVLKSMKMQGPIGYAPNPKTFKRN 357
S +P+P ++ P R+ PVD E+L++MK G IGYAPNP+T RN
Sbjct: 395 LSLIPVPLTTD--TLLSDWPAANSAPAPRRAPPVDAEILRTMKKVGFIGYAPNPRTRLRN 452
Query: 358 QMPY-LEESLEEM-SISKINGNKVIMQPIP------KHYQKLDIRYNKHGPNE-ELESFN 408
Q+PY L+ES E S S++ + V + P K Y+K+ I+Y+K G + + + +N
Sbjct: 453 QIPYRLKESDSEFDSFSQVTESPVGREEEPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYN 512
Query: 409 KTGQPGLEATLPNSYCNAMLQVLYYTPPVKATLLAHTCAKEFCLSCELGFLFRMLDTSGG 468
KT GLE +PN+YCN M+QVLY+ PV+ + H C KEFCL+CELGFLF MLD S G
Sbjct: 513 KTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLIQNHLCQKEFCLACELGFLFHMLDLSRG 572
Query: 469 TPCQATNFLRAFRTVPEAAALGLILPDR-APDIRVDLVALIQSWNRFILHQIHYEILE 525
PCQ NFLRAFRT+PEA+ALGLIL D + +L LIQ WNRFIL Q+H ++ E
Sbjct: 573 DPCQGNNFLRAFRTIPEASALGLILADSDEASGKGNLARLIQRWNRFILTQLHQDMQE 630
>AB014610-1|BAA31685.2| 1206|Homo sapiens KIAA0710 protein protein.
Length = 1206
Score = 363 bits (894), Expect = e-100
Identities = 211/538 (39%), Positives = 307/538 (57%), Gaps = 25/538 (4%)
Query: 1 MQKYTSFQVHDTDEVRDIITVEKCIYVLTKTTLRHQLRRGIPKHTHKSPNMTDMQCLYQV 60
+++Y+SFQV+ +D++R I ++E I LTK L++ R G+ + DM L
Sbjct: 110 LERYSSFQVNGSDDIRQIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSLLLT 169
Query: 61 NSTKLLMGGHQDKLIDLDLNKMVETI-IPIQEEGCAVLRSGGSSHVACGSANGIVALRDM 119
+S+ LL+GG Q+ ++++DLN + ET ++ G ++R + CG +G V+LRD+
Sbjct: 170 DSSTLLVGGLQNHILEIDLNTVQETQKYAVETPGVTIMRQT-NRFFFCGHTSGKVSLRDL 228
Query: 120 RAPTKAEHTFRAHTACLSDLDMQGDLLLTCGFTQAVGGVVAEPYIVVWDVRCLRGSNPGQ 179
R K EH F A + LSD D+ G+LL CGF+ + G+ + ++ V+D+R +R P Q
Sbjct: 229 RT-FKVEHEFDAFSGSLSDFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQ 287
Query: 180 GGWTIHTTSPPLLLHFLPAFSGRAVAASGDGHVSLLHVNAPEERQSIFKVETHSSQCNVM 239
+H P L F+P ++ R S G IF V
Sbjct: 288 ----VHVD--PAFLRFIPTYTSRLAIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTF 341
Query: 240 DVASTSQALAFGDQSGHLNLFSPTQNHEPVYNNFSRSTEFADP--VEGLPYVRFSDTRFQ 297
DV+++ QALAFGD G ++L+ T + EP +N +SR TEFA P V+ LP + +S
Sbjct: 342 DVSASKQALAFGDSEGCVHLW--TDSPEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLP 399
Query: 298 YSSVPLPQLASGGKWFNELPPEFFRKVYRKPKPVDPEVLKSMKMQGPIGYAPNPKTFKRN 357
S +P+P ++ P R+ PVD E+L++MK G IGYAPNP+T RN
Sbjct: 400 LSLIPVPLTTD--TLLSDWPAANSAPAPRRAPPVDAEILRTMKKVGFIGYAPNPRTRLRN 457
Query: 358 QMPY-LEESLEEM-SISKINGNKVIMQPIP------KHYQKLDIRYNKHGPNE-ELESFN 408
Q+PY L+ES E S S++ + V + P K Y+K+ I+Y+K G + + + +N
Sbjct: 458 QIPYRLKESDSEFDSFSQVTESPVGREEEPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYN 517
Query: 409 KTGQPGLEATLPNSYCNAMLQVLYYTPPVKATLLAHTCAKEFCLSCELGFLFRMLDTSGG 468
KT GLE +PN+YCN M+QVLY+ PV+ + H C KEFCL+CELGFLF MLD S G
Sbjct: 518 KTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLIQNHLCQKEFCLACELGFLFHMLDLSRG 577
Query: 469 TPCQATNFLRAFRTVPEAAALGLILPDR-APDIRVDLVALIQSWNRFILHQIHYEILE 525
PCQ NFLRAFRT+PEA+ALGLIL D + +L LIQ WNRFIL Q+H ++ E
Sbjct: 578 DPCQGNNFLRAFRTIPEASALGLILADSDEASGKGNLARLIQRWNRFILTQLHQDMQE 635
>BC132862-1|AAI32863.1| 1316|Homo sapiens ubiquitin specific
peptidase 42 protein.
Length = 1316
Score = 34.7 bits (76), Expect = 0.98
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 414 GLEATLPNSYCNAMLQVLYYTPPVKATLLAH----TC-AKEFCLSCEL 456
GL+ + NA LQ L YTPP+ +L+H TC A+ FC+ C +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTM 159
>BC060846-1|AAH60846.2| 1202|Homo sapiens USP42 protein protein.
Length = 1202
Score = 34.7 bits (76), Expect = 0.98
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 414 GLEATLPNSYCNAMLQVLYYTPPVKATLLAH----TC-AKEFCLSCEL 456
GL+ + NA LQ L YTPP+ +L+H TC A+ FC+ C +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTM 159
>BC010080-1|AAH10080.1| 305|Homo sapiens WD repeat domain 61
protein.
Length = 305
Score = 34.7 bits (76), Expect = 0.98
Identities = 32/154 (20%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 95 AVLRSGGSSHVACGSANGIVALRDMRAPTKAEHTFRAHTACLSDLDMQGDLLLTCGFTQA 154
++ S ++A G+ +GI+ + D+ A K HT H + L D +Q
Sbjct: 153 SIAYSPDGKYLASGAIDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPD-------SQL 204
Query: 155 VGGVVAEPYIVVWDVRC--LRGSNPGQGGWTIHTTSPPLLLHFLPAFSGRAVAASGDGHV 212
+ + YI ++DV+ L G+ G W ++ P HF+ + S ++V G
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 213 SLLHVNAPEERQSIFKVETHSSQCNVMDVASTSQ 246
+ +H + Q ++ V+ + + ++ V +
Sbjct: 265 TCVHTFFDHQDQ-VWGVKYNGNGSKIVSVGDDQE 297
>AY618868-1|AAT67238.1| 1324|Homo sapiens ubiquitin specific
protease 42 protein.
Length = 1324
Score = 34.7 bits (76), Expect = 0.98
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 414 GLEATLPNSYCNAMLQVLYYTPPVKATLLAH----TC-AKEFCLSCEL 456
GL+ + NA LQ L YTPP+ +L+H TC A+ FC+ C +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTM 159
>AK024754-1|BAB14986.1| 305|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21101 fis, clone CAS04682. ).
Length = 305
Score = 34.7 bits (76), Expect = 0.98
Identities = 32/154 (20%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 95 AVLRSGGSSHVACGSANGIVALRDMRAPTKAEHTFRAHTACLSDLDMQGDLLLTCGFTQA 154
++ S ++A G+ +GI+ + D+ A K HT H + L D +Q
Sbjct: 153 SIAYSPDGKYLASGAIDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPD-------SQL 204
Query: 155 VGGVVAEPYIVVWDVRC--LRGSNPGQGGWTIHTTSPPLLLHFLPAFSGRAVAASGDGHV 212
+ + YI ++DV+ L G+ G W ++ P HF+ + S ++V G
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 213 SLLHVNAPEERQSIFKVETHSSQCNVMDVASTSQ 246
+ +H + Q ++ V+ + + ++ V +
Sbjct: 265 TCVHTFFDHQDQ-VWGVKYNGNGSKIVSVGDDQE 297
>AK022759-1|BAB14232.1| 1198|Homo sapiens protein ( Homo sapiens
cDNA FLJ12697 fis, clone NT2RP1000522, weakly similar to
UBIQUITIN CARBOXYL-TERMINAL HYDROLASE DUB-1 (EC
3.1.2.15). ).
Length = 1198
Score = 34.7 bits (76), Expect = 0.98
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 414 GLEATLPNSYCNAMLQVLYYTPPVKATLLAH----TC-AKEFCLSCEL 456
GL+ + NA LQ L YTPP+ +L+H TC A+ FC+ C +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTM 159
>AJ601395-1|CAE53097.1| 1325|Homo sapiens ubiquitin-specific
protease 42 protein.
Length = 1325
Score = 34.7 bits (76), Expect = 0.98
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 414 GLEATLPNSYCNAMLQVLYYTPPVKATLLAH----TC-AKEFCLSCEL 456
GL+ + NA LQ L YTPP+ +L+H TC A+ FC+ C +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTM 159
>AF309553-1|AAG31639.1| 305|Homo sapiens meiotic recombination
protein REC14 protein.
Length = 305
Score = 34.7 bits (76), Expect = 0.98
Identities = 32/154 (20%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 95 AVLRSGGSSHVACGSANGIVALRDMRAPTKAEHTFRAHTACLSDLDMQGDLLLTCGFTQA 154
++ S ++A G+ +GI+ + D+ A K HT H + L D +Q
Sbjct: 153 SIAYSPDGKYLASGAIDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPD-------SQL 204
Query: 155 VGGVVAEPYIVVWDVRC--LRGSNPGQGGWTIHTTSPPLLLHFLPAFSGRAVAASGDGHV 212
+ + YI ++DV+ L G+ G W ++ P HF+ + S ++V G
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 213 SLLHVNAPEERQSIFKVETHSSQCNVMDVASTSQ 246
+ +H + Q ++ V+ + + ++ V +
Sbjct: 265 TCVHTFFDHQDQ-VWGVKYNGNGSKIVSVGDDQE 297
>AF100786-1|AAP97225.1| 305|Homo sapiens G protein beta
subunit-like protein protein.
Length = 305
Score = 34.7 bits (76), Expect = 0.98
Identities = 32/154 (20%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 95 AVLRSGGSSHVACGSANGIVALRDMRAPTKAEHTFRAHTACLSDLDMQGDLLLTCGFTQA 154
++ S ++A G+ +GI+ + D+ A K HT H + L D +Q
Sbjct: 153 SIAYSPDGKYLASGAIDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPD-------SQL 204
Query: 155 VGGVVAEPYIVVWDVRC--LRGSNPGQGGWTIHTTSPPLLLHFLPAFSGRAVAASGDGHV 212
+ + YI ++DV+ L G+ G W ++ P HF+ + S ++V G
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 213 SLLHVNAPEERQSIFKVETHSSQCNVMDVASTSQ 246
+ +H + Q ++ V+ + + ++ V +
Sbjct: 265 TCVHTFFDHQDQ-VWGVKYNGNGSKIVSVGDDQE 297
>AF127799-1|AAP97249.1| 305|Homo sapiens G protein beta
subunit-like protein protein.
Length = 305
Score = 32.3 bits (70), Expect = 5.2
Identities = 31/154 (20%), Positives = 65/154 (42%), Gaps = 11/154 (7%)
Query: 95 AVLRSGGSSHVACGSANGIVALRDMRAPTKAEHTFRAHTACLSDLDMQGDLLLTCGFTQA 154
++ S ++A G+ +GI+ + + A K HT H + L D +Q
Sbjct: 153 SIAYSPDGKYLASGAIDGIINIFAI-ATGKLLHTLEGHAMPIRSLTFSPD-------SQL 204
Query: 155 VGGVVAEPYIVVWDVRC--LRGSNPGQGGWTIHTTSPPLLLHFLPAFSGRAVAASGDGHV 212
+ + YI ++DV+ L G+ G W ++ P HF+ + S ++V G
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVRDVGTR 264
Query: 213 SLLHVNAPEERQSIFKVETHSSQCNVMDVASTSQ 246
+ +H + Q ++ V+ + + ++ V +
Sbjct: 265 TCVHTFFDHQDQ-VWGVKYNGNGSKIVSVGDDQE 297
>BC037574-1|AAH37574.1| 366|Homo sapiens ubiquitin specific
peptidase 46 protein.
Length = 366
Score = 31.9 bits (69), Expect = 6.9
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 423 YCNAMLQVLYYTPPVKATLLAHTC---AKEFCLSCELGFLFRMLDT 465
YCN++LQ LY+ P + +LA+ KE L+C L LF + T
Sbjct: 45 YCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTC-LADLFHSIAT 89
>AK024318-1|BAB14881.1| 366|Homo sapiens protein ( Homo sapiens
cDNA FLJ14256 fis, clone PLACE1000007, weakly similar to
PROBABLE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE R10E11.3
(EC ).
Length = 366
Score = 31.9 bits (69), Expect = 6.9
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 423 YCNAMLQVLYYTPPVKATLLAHTC---AKEFCLSCELGFLFRMLDT 465
YCN++LQ LY+ P + +LA+ KE L+C L LF + T
Sbjct: 45 YCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTC-LADLFHSIAT 89
>AK022614-1|BAB14133.1| 366|Homo sapiens protein ( Homo sapiens
cDNA FLJ12552 fis, clone NT2RM4000712, moderately
similar to Homo sapiens ubiquitin hydrolyzing enzyme I
(UBH1) mRNA. ).
Length = 366
Score = 31.9 bits (69), Expect = 6.9
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 423 YCNAMLQVLYYTPPVKATLLAHTC---AKEFCLSCELGFLFRMLDT 465
YCN++LQ LY+ P + +LA+ KE L+C L LF + T
Sbjct: 45 YCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTC-LADLFHSIAT 89
>BC026072-1|AAH26072.1| 370|Homo sapiens ubiquitin specific
peptidase 12 protein.
Length = 370
Score = 31.5 bits (68), Expect = 9.1
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 423 YCNAMLQVLYYTPPVKATLLAHTC---AKEFCLSCELGFLFRMLDT 465
YCN++LQ LY+ P + +LA+ KE L+C L LF + T
Sbjct: 49 YCNSVLQALYFCRPFREKVLAYKSQPRKKESLLTC-LADLFHSIAT 93
>AL355473-1|CAI16331.1| 370|Homo sapiens ubiquitin specific
protease 12 like 1 protein.
Length = 370
Score = 31.5 bits (68), Expect = 9.1
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 423 YCNAMLQVLYYTPPVKATLLAHTC---AKEFCLSCELGFLFRMLDT 465
YCN++LQ LY+ P + +LA+ KE L+C L LF + T
Sbjct: 49 YCNSVLQALYFCRPFREKVLAYKSQPRKKESLLTC-LADLFHSIAT 93
>AL158062-1|CAH70555.1| 370|Homo sapiens ubiquitin specific
protease 12 like 1 protein.
Length = 370
Score = 31.5 bits (68), Expect = 9.1
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 423 YCNAMLQVLYYTPPVKATLLAHTC---AKEFCLSCELGFLFRMLDT 465
YCN++LQ LY+ P + +LA+ KE L+C L LF + T
Sbjct: 49 YCNSVLQALYFCRPFREKVLAYKSQPRKKESLLTC-LADLFHSIAT 93
>AF022789-1|AAC23551.1| 355|Homo sapiens ubiquitin hydrolyzing
enzyme I protein.
Length = 355
Score = 31.5 bits (68), Expect = 9.1
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 423 YCNAMLQVLYYTPPVKATLLAHTC---AKEFCLSCELGFLFRMLDT 465
YCN++LQ LY+ P + +LA+ KE L+C L LF + T
Sbjct: 34 YCNSVLQALYFCRPFREKVLAYKSQPRKKESLLTC-LADLFHSIAT 78
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.135 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,362,921
Number of Sequences: 224733
Number of extensions: 4660054
Number of successful extensions: 14288
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 14252
Number of HSP's gapped (non-prelim): 21
length of query: 616
length of database: 73,234,838
effective HSP length: 94
effective length of query: 522
effective length of database: 52,109,936
effective search space: 27201386592
effective search space used: 27201386592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 68 (31.5 bits)
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