GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005271-TA|BGIBMGA005271-PA|IPR007110|Immunoglobulin-like
         (186 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.0  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   9.7  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   9.7  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 121 NETHVVLLRVMPILSGNYSCEVILN 145
           N+  + L +V  I +GNY+C  + N
Sbjct: 363 NDGSLYLTKVQLIHAGNYTCHAVRN 387



 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/51 (19%), Positives = 23/51 (45%)

Query: 132 PILSGNYSCEVILNAPSFPHYMASGRLDVVVCDISDLQLPPITTWALQNLN 182
           PI+      + +++  +   ++ +G    + C+I  LQ P    W   +L+
Sbjct: 848 PIVQSGIFGKYMVSPSNDALFVLNGETRTINCEIGGLQHPGAVVWFTVSLH 898


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)

Query: 5   DNDEENGVTN 14
           D DEENG+T+
Sbjct: 116 DGDEENGLTS 125


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
          protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)

Query: 5  DNDEENGVTN 14
          D DEENG+T+
Sbjct: 87 DGDEENGLTS 96


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,846
Number of Sequences: 429
Number of extensions: 2922
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 186
length of database: 140,377
effective HSP length: 54
effective length of query: 132
effective length of database: 117,211
effective search space: 15471852
effective search space used: 15471852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)