Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005270-TA|BGIBMGA005270-PA|IPR004728|Translocation
protein Sec62
(362 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U93239-1|AAB51391.1| 399|Homo sapiens Sec62 protein. 152 2e-36
D87127-1|BAA13254.1| 399|Homo sapiens translocation protein-1 p... 152 2e-36
BC012035-1|AAH12035.1| 399|Homo sapiens TLOC1 protein protein. 152 2e-36
AB024586-1|BAB12685.1| 399|Homo sapiens translocation protein 1... 152 2e-36
BC003677-1|AAH03677.1| 169|Homo sapiens Unknown (protein for IM... 79 3e-14
BC105971-1|AAI05972.1| 104|Homo sapiens TLOC1 protein protein. 58 4e-08
BC030558-1|AAH30558.1| 172|Homo sapiens chromosome 9 open readi... 33 2.1
AY358452-1|AAQ88817.1| 172|Homo sapiens C9ORF7 protein. 33 2.1
AL593848-2|CAI17249.1| 172|Homo sapiens chromosome 9 open readi... 33 2.1
AK075548-1|BAC11691.1| 172|Homo sapiens protein ( Homo sapiens ... 33 2.1
AK074852-1|BAC11245.1| 172|Homo sapiens protein ( Homo sapiens ... 33 2.1
AJ011373-1|CAB66156.1| 172|Homo sapiens hypothetical protein pr... 33 2.1
M96803-1|AAA60580.1| 2364|Homo sapiens beta-spectrin protein. 31 6.3
AF327441-1|AAO15362.1| 2155|Homo sapiens beta-spectrin 2 isoform... 31 6.3
AC093110-1|AAY24229.1| 2314|Homo sapiens unknown protein. 31 6.3
AB209748-1|BAD92985.1| 2377|Homo sapiens spectrin, beta, non-ery... 31 6.3
>U93239-1|AAB51391.1| 399|Homo sapiens Sec62 protein.
Length = 399
Score = 152 bits (369), Expect = 2e-36
Identities = 75/211 (35%), Positives = 110/211 (52%), Gaps = 8/211 (3%)
Query: 145 RLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVFGTITVCMFPLWPATVRIGVYYLS 204
+LE H +QVFLD + YVWIYDP + +V G+++V I +FPLWPA +R+GVYYLS
Sbjct: 169 KLEPHDDQVFLDGNEVYVWIYDPVHFKTFVMGLILVIAVIAATLFPLWPAEMRVGVYYLS 228
Query: 205 IAAAAFLVMIIGLTVLRVVVFCLVWILTLSRHHLWLLPNLTEDVGFFASFWPLYHYEYRG 264
+ A F+ I+ L V R ++F ++W++T RHH W LPNLT DVGF SF PLY +EY+G
Sbjct: 229 VGAGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNLTADVGFIDSFRPLYTHEYKG 288
Query: 265 PGXXXXXXXXXXXXXXXXXXXXXETEKTPLIDDK-STAEAQAEDVGSGDAKSSELDATSA 323
P +++ D++ GSG + S+ D+
Sbjct: 289 PKADLKKDEKSETKKQQKSDSEEKSDSEKKEDEEGKVGPGNHGTEGSGGERHSDTDSDRR 348
Query: 324 TTDKLXXXXXXXXXXXXTDRDFEIVDHDEVE 354
D+ DFE++ +E+E
Sbjct: 349 EDDR-------SQHSSGNGNDFEMITKEELE 372
Score = 78.6 bits (185), Expect = 3e-14
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 AVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALLTSKWA---TGKNPAFTTRIEVTHYL 75
AVAK+L+ N PTK T + H V+YF +KAVD LL SKWA G+ FTTR V Y
Sbjct: 23 AVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSKWAKAKKGEEALFTTRESVVDYC 82
Query: 76 HRMLLHKLFHRAKKV 90
+R+L + FHRA KV
Sbjct: 83 NRLLKKQFFHRALKV 97
>D87127-1|BAA13254.1| 399|Homo sapiens translocation protein-1
protein.
Length = 399
Score = 152 bits (369), Expect = 2e-36
Identities = 75/211 (35%), Positives = 110/211 (52%), Gaps = 8/211 (3%)
Query: 145 RLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVFGTITVCMFPLWPATVRIGVYYLS 204
+LE H +QVFLD + YVWIYDP + +V G+++V I +FPLWPA +R+GVYYLS
Sbjct: 169 KLEPHDDQVFLDGNEVYVWIYDPVHFKTFVMGLILVIAVIAATLFPLWPAEMRVGVYYLS 228
Query: 205 IAAAAFLVMIIGLTVLRVVVFCLVWILTLSRHHLWLLPNLTEDVGFFASFWPLYHYEYRG 264
+ A F+ I+ L V R ++F ++W++T RHH W LPNLT DVGF SF PLY +EY+G
Sbjct: 229 VGAGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNLTADVGFIDSFRPLYTHEYKG 288
Query: 265 PGXXXXXXXXXXXXXXXXXXXXXETEKTPLIDDK-STAEAQAEDVGSGDAKSSELDATSA 323
P +++ D++ GSG + S+ D+
Sbjct: 289 PKADLKKDEKSETKKQQKSDSEEKSDSEKKEDEEGKVGPGNHGTEGSGGERHSDTDSDRR 348
Query: 324 TTDKLXXXXXXXXXXXXTDRDFEIVDHDEVE 354
D+ DFE++ +E+E
Sbjct: 349 EDDR-------SQHSSGNGNDFEMITKEELE 372
Score = 78.6 bits (185), Expect = 3e-14
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 AVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALLTSKWA---TGKNPAFTTRIEVTHYL 75
AVAK+L+ N PTK T + H V+YF +KAVD LL SKWA G+ FTTR V Y
Sbjct: 23 AVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSKWAKAKKGEEALFTTRESVVDYC 82
Query: 76 HRMLLHKLFHRAKKV 90
+R+L + FHRA KV
Sbjct: 83 NRLLKKQFFHRALKV 97
>BC012035-1|AAH12035.1| 399|Homo sapiens TLOC1 protein protein.
Length = 399
Score = 152 bits (369), Expect = 2e-36
Identities = 75/211 (35%), Positives = 110/211 (52%), Gaps = 8/211 (3%)
Query: 145 RLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVFGTITVCMFPLWPATVRIGVYYLS 204
+LE H +QVFLD + YVWIYDP + +V G+++V I +FPLWPA +R+GVYYLS
Sbjct: 169 KLEPHDDQVFLDGNEVYVWIYDPVHFKTFVMGLILVIAVIAATLFPLWPAEMRVGVYYLS 228
Query: 205 IAAAAFLVMIIGLTVLRVVVFCLVWILTLSRHHLWLLPNLTEDVGFFASFWPLYHYEYRG 264
+ A F+ I+ L V R ++F ++W++T RHH W LPNLT DVGF SF PLY +EY+G
Sbjct: 229 VGAGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNLTADVGFIDSFRPLYTHEYKG 288
Query: 265 PGXXXXXXXXXXXXXXXXXXXXXETEKTPLIDDK-STAEAQAEDVGSGDAKSSELDATSA 323
P +++ D++ GSG + S+ D+
Sbjct: 289 PKADLKKDEKSETKKQQKSDSEEKSDSEKKEDEEGKVGPGNHGTEGSGGERHSDTDSDRR 348
Query: 324 TTDKLXXXXXXXXXXXXTDRDFEIVDHDEVE 354
D+ DFE++ +E+E
Sbjct: 349 EDDR-------SQHSSGNGNDFEMITKEELE 372
Score = 78.6 bits (185), Expect = 3e-14
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 AVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALLTSKWA---TGKNPAFTTRIEVTHYL 75
AVAK+L+ N PTK T + H V+YF +KAVD LL SKWA G+ FTTR V Y
Sbjct: 23 AVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSKWAKAKKGEEALFTTRESVVDYC 82
Query: 76 HRMLLHKLFHRAKKV 90
+R+L + FHRA KV
Sbjct: 83 NRLLKKQFFHRALKV 97
>AB024586-1|BAB12685.1| 399|Homo sapiens translocation protein 1
protein.
Length = 399
Score = 152 bits (369), Expect = 2e-36
Identities = 75/211 (35%), Positives = 110/211 (52%), Gaps = 8/211 (3%)
Query: 145 RLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVFGTITVCMFPLWPATVRIGVYYLS 204
+LE H +QVFLD + YVWIYDP + +V G+++V I +FPLWPA +R+GVYYLS
Sbjct: 169 KLEPHDDQVFLDGNEVYVWIYDPVHFKTFVMGLILVIAVIAATLFPLWPAEMRVGVYYLS 228
Query: 205 IAAAAFLVMIIGLTVLRVVVFCLVWILTLSRHHLWLLPNLTEDVGFFASFWPLYHYEYRG 264
+ A F+ I+ L V R ++F ++W++T RHH W LPNLT DVGF SF PLY +EY+G
Sbjct: 229 VGAGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNLTADVGFIDSFRPLYTHEYKG 288
Query: 265 PGXXXXXXXXXXXXXXXXXXXXXETEKTPLIDDK-STAEAQAEDVGSGDAKSSELDATSA 323
P +++ D++ GSG + S+ D+
Sbjct: 289 PKADLKKDEKSETKKQQKSDSEEKSDSEKKEDEEGKVGPGNHGTEGSGGERHSDTDSDRR 348
Query: 324 TTDKLXXXXXXXXXXXXTDRDFEIVDHDEVE 354
D+ DFE++ +E+E
Sbjct: 349 EDDR-------SQHSSGNGNDFEMITKEELE 372
Score = 78.6 bits (185), Expect = 3e-14
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 AVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALLTSKWA---TGKNPAFTTRIEVTHYL 75
AVAK+L+ N PTK T + H V+YF +KAVD LL SKWA G+ FTTR V Y
Sbjct: 23 AVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSKWAKAKKGEEALFTTRESVVDYC 82
Query: 76 HRMLLHKLFHRAKKV 90
+R+L + FHRA KV
Sbjct: 83 NRLLKKQFFHRALKV 97
>BC003677-1|AAH03677.1| 169|Homo sapiens Unknown (protein for
IMAGE:3932691) protein.
Length = 169
Score = 78.6 bits (185), Expect = 3e-14
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 AVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALLTSKWA---TGKNPAFTTRIEVTHYL 75
AVAK+L+ N PTK T + H V+YF +KAVD LL SKWA G+ FTTR V Y
Sbjct: 23 AVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSKWAKAKKGEEALFTTRESVVDYC 82
Query: 76 HRMLLHKLFHRAKKV 90
+R+L + FHRA KV
Sbjct: 83 NRLLKKQFFHRALKV 97
>BC105971-1|AAI05972.1| 104|Homo sapiens TLOC1 protein protein.
Length = 104
Score = 58.4 bits (135), Expect = 4e-08
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 36 LNHHVEYFTGTKAVDALLTSKWA---TGKNPAFTTRIEVTHYLHRMLLHKLFHRAKKV 90
+ H V+YF +KAVD LL SKWA G+ FTTR V Y +R+L + FHRA KV
Sbjct: 2 MGHRVDYFIASKAVDCLLDSKWAKAKKGEEALFTTRESVVDYCNRLLKKQFFHRALKV 59
>BC030558-1|AAH30558.1| 172|Homo sapiens chromosome 9 open reading
frame 7 protein.
Length = 172
Score = 32.7 bits (71), Expect = 2.1
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 170 WYYWVCGILVVFGTITVCMFPLWPATVRIGVYYLSIAAAAFLVMIIGLTVLRVVVFCLVW 229
WY W+C + V G ++ + L+ I ++ L+IAA +++M + +L FC +
Sbjct: 26 WYRWLCRLSGVLGAVSCAISGLFNC---ITIHPLNIAAGVWMIMNAFILLLCEAPFCCQF 82
Query: 230 I 230
I
Sbjct: 83 I 83
>AY358452-1|AAQ88817.1| 172|Homo sapiens C9ORF7 protein.
Length = 172
Score = 32.7 bits (71), Expect = 2.1
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 170 WYYWVCGILVVFGTITVCMFPLWPATVRIGVYYLSIAAAAFLVMIIGLTVLRVVVFCLVW 229
WY W+C + V G ++ + L+ I ++ L+IAA +++M + +L FC +
Sbjct: 26 WYRWLCRLSGVLGAVSCAISGLFNC---ITIHPLNIAAGVWMIMNAFILLLCEAPFCCQF 82
Query: 230 I 230
I
Sbjct: 83 I 83
>AL593848-2|CAI17249.1| 172|Homo sapiens chromosome 9 open reading
frame 7 protein.
Length = 172
Score = 32.7 bits (71), Expect = 2.1
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 170 WYYWVCGILVVFGTITVCMFPLWPATVRIGVYYLSIAAAAFLVMIIGLTVLRVVVFCLVW 229
WY W+C + V G ++ + L+ I ++ L+IAA +++M + +L FC +
Sbjct: 26 WYRWLCRLSGVLGAVSCAISGLFNC---ITIHPLNIAAGVWMIMNAFILLLCEAPFCCQF 82
Query: 230 I 230
I
Sbjct: 83 I 83
>AK075548-1|BAC11691.1| 172|Homo sapiens protein ( Homo sapiens
cDNA PSEC0248 fis, clone NT2RP3001619. ).
Length = 172
Score = 32.7 bits (71), Expect = 2.1
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 170 WYYWVCGILVVFGTITVCMFPLWPATVRIGVYYLSIAAAAFLVMIIGLTVLRVVVFCLVW 229
WY W+C + V G ++ + L+ I ++ L+IAA +++M + +L FC +
Sbjct: 26 WYRWLCRLSGVLGAVSCAISGLFNC---ITIHPLNIAAGVWMIMNAFILLLCEAPFCCQF 82
Query: 230 I 230
I
Sbjct: 83 I 83
>AK074852-1|BAC11245.1| 172|Homo sapiens protein ( Homo sapiens
cDNA FLJ90371 fis, clone NT2RP2004524. ).
Length = 172
Score = 32.7 bits (71), Expect = 2.1
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 170 WYYWVCGILVVFGTITVCMFPLWPATVRIGVYYLSIAAAAFLVMIIGLTVLRVVVFCLVW 229
WY W+C + V G ++ + L+ I ++ L+IAA +++M + +L FC +
Sbjct: 26 WYRWLCRLSGVLGAVSCAISGLFNC---ITIHPLNIAAGVWMIMNAFILLLCEAPFCCQF 82
Query: 230 I 230
I
Sbjct: 83 I 83
>AJ011373-1|CAB66156.1| 172|Homo sapiens hypothetical protein
protein.
Length = 172
Score = 32.7 bits (71), Expect = 2.1
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 170 WYYWVCGILVVFGTITVCMFPLWPATVRIGVYYLSIAAAAFLVMIIGLTVLRVVVFCLVW 229
WY W+C + V G ++ + L+ I ++ L+IAA +++M + +L FC +
Sbjct: 26 WYRWLCRLSGVLGAVSCAISGLFNC---ITIHPLNIAAGVWMIMNAFILLLCEAPFCCQF 82
Query: 230 I 230
I
Sbjct: 83 I 83
>M96803-1|AAA60580.1| 2364|Homo sapiens beta-spectrin protein.
Length = 2364
Score = 31.1 bits (67), Expect = 6.3
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 27 NVPTKKTKFLNHHVEYFTGTKAVDALLTSKWATGKNPAFTTRIEVTHYLHRML-----LH 81
N+ ++ +NH + + DA ++W G N A+ +E+ ++L LH
Sbjct: 1749 NIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELH 1808
Query: 82 KLFHRAKKV 90
K +H AK++
Sbjct: 1809 KFYHDAKEI 1817
>AF327441-1|AAO15362.1| 2155|Homo sapiens beta-spectrin 2 isoform 2
protein.
Length = 2155
Score = 31.1 bits (67), Expect = 6.3
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 27 NVPTKKTKFLNHHVEYFTGTKAVDALLTSKWATGKNPAFTTRIEVTHYLHRML-----LH 81
N+ ++ +NH + + DA ++W G N A+ +E+ ++L LH
Sbjct: 1736 NIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELH 1795
Query: 82 KLFHRAKKV 90
K +H AK++
Sbjct: 1796 KFYHDAKEI 1804
>AC093110-1|AAY24229.1| 2314|Homo sapiens unknown protein.
Length = 2314
Score = 31.1 bits (67), Expect = 6.3
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 27 NVPTKKTKFLNHHVEYFTGTKAVDALLTSKWATGKNPAFTTRIEVTHYLHRML-----LH 81
N+ ++ +NH + + DA ++W G N A+ +E+ ++L LH
Sbjct: 1699 NIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELH 1758
Query: 82 KLFHRAKKV 90
K +H AK++
Sbjct: 1759 KFYHDAKEI 1767
>AB209748-1|BAD92985.1| 2377|Homo sapiens spectrin, beta,
non-erythrocytic 1 isoform 1 variant protein.
Length = 2377
Score = 31.1 bits (67), Expect = 6.3
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 27 NVPTKKTKFLNHHVEYFTGTKAVDALLTSKWATGKNPAFTTRIEVTHYLHRML-----LH 81
N+ ++ +NH + + DA ++W G N A+ +E+ ++L LH
Sbjct: 1762 NIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELH 1821
Query: 82 KLFHRAKKV 90
K +H AK++
Sbjct: 1822 KFYHDAKEI 1830
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.323 0.138 0.442
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,752,919
Number of Sequences: 224733
Number of extensions: 1435438
Number of successful extensions: 2281
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2259
Number of HSP's gapped (non-prelim): 20
length of query: 362
length of database: 73,234,838
effective HSP length: 91
effective length of query: 271
effective length of database: 52,784,135
effective search space: 14304500585
effective search space used: 14304500585
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 66 (30.7 bits)
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